RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 ERASQ7Z444 233 aa6.34□□□□□ -1.39
PRPF40B-204ENST00000527253 Q8IZM0 81 aa6.34□□□□□ -1.39
PRPF40B-204ENST00000527253 PACRGQ96M98 296 aaPredicted RBP6.34□□□□□ -1.39
PRPF40B-204ENST00000527253 SCGB3A1Q96QR1 104 aa6.34□□□□□ -1.39
PRPF40B-204ENST00000527253 M0QXV9 152 aa6.33□□□□□ -1.4
PRPF40B-204ENST00000527253 PRSS2P07478 247 aa6.33□□□□□ -1.4
PRPF40B-204ENST00000527253 HERVK_113P63121 156 aa6.33□□□□□ -1.4
PRPF40B-204ENST00000527253 C6orf226Q5I0X4 101 aa6.33□□□□□ -1.4
PRPF40B-204ENST00000527253 LINC00469Q8N7U9 141 aa6.33□□□□□ -1.4
PRPF40B-204ENST00000527253 MRPL18Q9H0U6 180 aaKnown RBP6.33□□□□□ -1.4
PRPF40B-204ENST00000527253 CARHSP1Q9Y2V2 147 aaKnown RBP6.33□□□□□ -1.4
PRPF40B-204ENST00000527253 S100PP25815 95 aa6.32□□□□□ -1.4
PRPF40B-204ENST00000527253 G0S2P27469 103 aa6.32□□□□□ -1.4
PRPF40B-204ENST00000527253 CKS1BP61024 79 aa6.32□□□□□ -1.4
PRPF40B-204ENST00000527253 SEC11AP67812 179 aa6.32□□□□□ -1.4
PRPF40B-204ENST00000527253 PAPPA-AS1Q5QFB9 102 aa6.32□□□□□ -1.4
PRPF40B-204ENST00000527253 CST9LQ9H4G1 147 aa6.32□□□□□ -1.4
PRPF40B-204ENST00000527253 GEMIN7Q9H840 131 aaKnown RBP6.32□□□□□ -1.4
PRPF40B-204ENST00000527253 IGLV5-45A0A087WSX0 123 aa6.31□□□□□ -1.4
PRPF40B-204ENST00000527253 SMIM1B2RUZ4 78 aa6.31□□□□□ -1.4
PRPF40B-204ENST00000527253 FABP9Q0Z7S8 132 aa6.31□□□□□ -1.4
PRPF40B-204ENST00000527253 URB1-AS1Q96HZ7 61 aa6.31□□□□□ -1.4
PRPF40B-204ENST00000527253 XAGE1AQ9HD64 81 aa6.31□□□□□ -1.4
PRPF40B-204ENST00000527253 RPS10P5Q9NQ39 176 aa6.31□□□□□ -1.4
PRPF40B-204ENST00000527253 A0A096LNJ9 63 aa6.3□□□□□ -1.4
PRPF40B-204ENST00000527253 TINCRA0A1B0GVN0 87 aa6.3□□□□□ -1.4
PRPF40B-204ENST00000527253 F8VRH5 84 aa6.3□□□□□ -1.4
PRPF40B-204ENST00000527253 H0Y9J4 135 aa6.3□□□□□ -1.4
PRPF40B-204ENST00000527253 COX19Q49B96 90 aa6.3□□□□□ -1.4
PRPF40B-204ENST00000527253 PRR26Q8N8Z3 221 aa6.3□□□□□ -1.4
PRPF40B-204ENST00000527253 DIRC1Q969H9 104 aa6.3□□□□□ -1.4
PRPF40B-204ENST00000527253 KRTAP1-4P0C5Y4 121 aa6.29□□□□□ -1.4
PRPF40B-204ENST00000527253 UBE2BP63146 152 aa6.29□□□□□ -1.4
PRPF40B-204ENST00000527253 RHEBQ15382 184 aa6.29□□□□□ -1.4
PRPF40B-204ENST00000527253 PDZD11Q5EBL8 140 aa6.29□□□□□ -1.4
PRPF40B-204ENST00000527253 FA2HQ7L5A8 372 aa6.29□□□□□ -1.4
PRPF40B-204ENST00000527253 COX7B2Q8TF08 81 aa6.29□□□□□ -1.4
PRPF40B-204ENST00000527253 C22orf24Q9Y442 160 aa6.29□□□□□ -1.4
PRPF40B-204ENST00000527253 SPINK8P0C7L1 97 aa6.28□□□□□ -1.4
PRPF40B-204ENST00000527253 PMVKQ15126 192 aa6.28□□□□□ -1.4
PRPF40B-204ENST00000527253 C18orf32Q8TCD1 76 aa6.27□□□□□ -1.41
PRPF40B-204ENST00000527253 TRAPPC1Q9Y5R8 145 aa6.27□□□□□ -1.41
PRPF40B-204ENST00000527253 LINC01549A6NIU2 74 aa6.26□□□□□ -1.41
PRPF40B-204ENST00000527253 IGLC3P0DOY3 106 aa6.26□□□□□ -1.41
PRPF40B-204ENST00000527253 CXCL5P42830 114 aa6.26□□□□□ -1.41
PRPF40B-204ENST00000527253 PMCHL1Q16048 86 aa6.26□□□□□ -1.41
PRPF40B-204ENST00000527253 SMCO4Q9NRQ5 59 aa6.26□□□□□ -1.41
PRPF40B-204ENST00000527253 APOC3P02656 99 aa6.25□□□□□ -1.41
PRPF40B-204ENST00000527253 RAB5BP61020 215 aa6.25□□□□□ -1.41
PRPF40B-204ENST00000527253 RNF213Q63HN8 5207 aa6.25□□□□□ -1.41
PRPF40B-204ENST00000527253 IGLV5-39A0A0G2JS06 123 aa6.24□□□□□ -1.41
PRPF40B-204ENST00000527253 ZNF861PO60384 105 aa6.24□□□□□ -1.41
PRPF40B-204ENST00000527253 LINC00614P0C842 121 aa6.24□□□□□ -1.41
PRPF40B-204ENST00000527253 ZNF22P17026 224 aaPredicted RBP6.24□□□□□ -1.41
PRPF40B-204ENST00000527253 LBHQ53QV2 105 aaPredicted RBP6.24□□□□□ -1.41
PRPF40B-204ENST00000527253 MRPL55Q7Z7F7 128 aaKnown RBP6.24□□□□□ -1.41
PRPF40B-204ENST00000527253 LINC00167Q96N53 147 aa6.24□□□□□ -1.41
PRPF40B-204ENST00000527253 YPEL4Q96NS1 127 aa6.24□□□□□ -1.41
PRPF40B-204ENST00000527253 TP73-AS1Q9UF72 201 aa6.24□□□□□ -1.41
PRPF40B-204ENST00000527253 IGLV1-50A0A075B6I6 118 aa6.23□□□□□ -1.41
PRPF40B-204ENST00000527253 NDUFA6P56556 154 aa6.23□□□□□ -1.41
PRPF40B-204ENST00000527253 IGLV5-37A0A075B6J1 123 aa6.22□□□□□ -1.41
PRPF40B-204ENST00000527253 GAGE10A6NGK3 116 aa6.22□□□□□ -1.41
PRPF40B-204ENST00000527253 RPL37AP8A6NKH3 93 aa6.22□□□□□ -1.41
PRPF40B-204ENST00000527253 H3BRM9 83 aa6.22□□□□□ -1.41
PRPF40B-204ENST00000527253 NUPR1O60356 82 aa6.22□□□□□ -1.41
PRPF40B-204ENST00000527253 SCO1O75880 301 aa6.22□□□□□ -1.41
PRPF40B-204ENST00000527253 HBDP02042 147 aa6.22□□□□□ -1.41
PRPF40B-204ENST00000527253 C11orf86A6NJI1 115 aa6.21□□□□□ -1.42
PRPF40B-204ENST00000527253 BCE1O60756 84 aa6.21□□□□□ -1.42
PRPF40B-204ENST00000527253 ATP5LO75964 103 aa6.2□□□□□ -1.42
PRPF40B-204ENST00000527253 SNAPINO95295 136 aa6.2□□□□□ -1.42
PRPF40B-204ENST00000527253 PFN2P35080 140 aa6.2□□□□□ -1.42
PRPF40B-204ENST00000527253 C4orf48Q5BLP8 95 aa6.2□□□□□ -1.42
PRPF40B-204ENST00000527253 BAGE3Q86Y29 109 aa6.2□□□□□ -1.42
PRPF40B-204ENST00000527253 SVBPQ8N300 66 aa6.2□□□□□ -1.42
PRPF40B-204ENST00000527253 LPAP08519 4548 aa6.19□□□□□ -1.42
PRPF40B-204ENST00000527253 KRTAP13-1Q8IUC0 172 aa6.19□□□□□ -1.42
PRPF40B-204ENST00000527253 Q8NDZ9 215 aa6.19□□□□□ -1.42
PRPF40B-204ENST00000527253 ZNF625Q96I27 306 aaPredicted RBP6.19□□□□□ -1.42
PRPF40B-204ENST00000527253 A0A087X002 238 aa6.18□□□□□ -1.42
PRPF40B-204ENST00000527253 VPREB1P12018 145 aa6.18□□□□□ -1.42
PRPF40B-204ENST00000527253 SND1-IT1Q9HBX3 110 aa6.18□□□□□ -1.42
PRPF40B-204ENST00000527253 ERG28Q9UKR5 140 aa6.18□□□□□ -1.42
PRPF40B-204ENST00000527253 RPL28P46779 137 aaKnown RBP6.17□□□□□ -1.42
PRPF40B-204ENST00000527253 NDUFA5Q16718 116 aa6.17□□□□□ -1.42
PRPF40B-204ENST00000527253 TMEM170BQ5T4T1 132 aa6.17□□□□□ -1.42
PRPF40B-204ENST00000527253 ANAPC11Q9NYG5 84 aa6.17□□□□□ -1.42
PRPF40B-204ENST00000527253 CHTOPQ9Y3Y2 248 aaKnown RBP6.17□□□□□ -1.42
PRPF40B-204ENST00000527253 IGKV2-28A0A075B6P5 120 aa6.16□□□□□ -1.42
PRPF40B-204ENST00000527253 IGKV2D-28P01615 120 aa6.16□□□□□ -1.42
PRPF40B-204ENST00000527253 RPL13AP40429 203 aaKnown RBP6.16□□□□□ -1.42
PRPF40B-204ENST00000527253 CBLN2Q8IUK8 224 aa6.16□□□□□ -1.42
PRPF40B-204ENST00000527253 NKAPP1Q8N9T2 125 aa6.16□□□□□ -1.42
PRPF40B-204ENST00000527253 TRAV12-1A0A0B4J245 112 aa6.15□□□□□ -1.42
PRPF40B-204ENST00000527253 TMEM223A0PJW6 202 aa6.15□□□□□ -1.42
PRPF40B-204ENST00000527253 IFI27L1Q96BM0 104 aa6.15□□□□□ -1.42
PRPF40B-204ENST00000527253 CHCHD1Q96BP2 118 aaKnown RBP6.15□□□□□ -1.42
PRPF40B-204ENST00000527253 TMEM238C9JI98 176 aa6.14□□□□□ -1.43
PRPF40B-204ENST00000527253 COX17Q14061 63 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms