RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 TP53AIP1Q9HCN2 124 aa1.37□□□□□ -2.19
USP47-206ENST00000525367 WNK3Q9BYP7 1800 aa1.37□□□□□ -2.19
USP47-206ENST00000525367 KNDC1Q76NI1 1749 aa1.37□□□□□ -2.19
USP47-206ENST00000525367 A0A1B0GUT8 65 aa1.36□□□□□ -2.19
USP47-206ENST00000525367 IGLC2P0DOY2 106 aa1.36□□□□□ -2.19
USP47-206ENST00000525367 PIGYQ3MUY2 71 aa1.36□□□□□ -2.19
USP47-206ENST00000525367 ASXL3Q9C0F0 2248 aa1.36□□□□□ -2.19
USP47-206ENST00000525367 KCPQ6ZWJ8 1503 aa1.35□□□□□ -2.19
USP47-206ENST00000525367 LRRC9Q6ZRR7 1453 aa1.35□□□□□ -2.19
USP47-206ENST00000525367 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.35□□□□□ -2.19
USP47-206ENST00000525367 KMT2BQ9UMN6 2715 aaPredicted RBP1.34□□□□□ -2.19
USP47-206ENST00000525367 PRO0255Q9UI72 69 aa1.34□□□□□ -2.19
USP47-206ENST00000525367 MYH4Q9Y623 1939 aa1.33□□□□□ -2.2
USP47-206ENST00000525367 LINC00959A0A1B0GUT2 108 aa1.33□□□□□ -2.2
USP47-206ENST00000525367 FCGBPQ9Y6R7 5405 aaPredicted RBP1.33□□□□□ -2.2
USP47-206ENST00000525367 XRN1Q8IZH2 1706 aaKnown RBP1.32□□□□□ -2.2
USP47-206ENST00000525367 ABCC1P33527 1531 aa1.32□□□□□ -2.2
USP47-206ENST00000525367 SETBP1Q9Y6X0 1596 aa1.32□□□□□ -2.2
USP47-206ENST00000525367 SHPRHQ149N8 1683 aa1.32□□□□□ -2.2
USP47-206ENST00000525367 ANKARQ7Z5J8 1434 aa1.32□□□□□ -2.2
USP47-206ENST00000525367 PLXNB2O15031 1838 aa1.31□□□□□ -2.2
USP47-206ENST00000525367 DNAJC13O75165 2243 aa1.31□□□□□ -2.2
USP47-206ENST00000525367 SAMD9Q5K651 1589 aa1.31□□□□□ -2.2
USP47-206ENST00000525367 TARBP1Q13395 1621 aaKnown RBP1.31□□□□□ -2.2
USP47-206ENST00000525367 UBR1Q8IWV7 1749 aa1.31□□□□□ -2.2
USP47-206ENST00000525367 ASH1LQ9NR48 2969 aaKnown RBP1.31□□□□□ -2.2
USP47-206ENST00000525367 ATP7BP35670 1465 aa1.31□□□□□ -2.2
USP47-206ENST00000525367 MAP3K1Q13233 1512 aa1.3□□□□□ -2.2
USP47-206ENST00000525367 ZFHX3Q15911 3703 aa1.3□□□□□ -2.2
USP47-206ENST00000525367 DIP2BQ9P265 1576 aa1.3□□□□□ -2.2
USP47-206ENST00000525367 A0A0G2JMZ2 1700 aa1.3□□□□□ -2.2
USP47-206ENST00000525367 I3L2K1 104 aa1.3□□□□□ -2.2
USP47-206ENST00000525367 DEFB112Q30KQ8 113 aa1.3□□□□□ -2.2
USP47-206ENST00000525367 C18orf32Q8TCD1 76 aa1.3□□□□□ -2.2
USP47-206ENST00000525367 CCDC141Q6ZP82 1450 aa1.3□□□□□ -2.2
USP47-206ENST00000525367 TULP4Q9NRJ4 1543 aa1.3□□□□□ -2.2
USP47-206ENST00000525367 Q8IZM0 81 aa1.29□□□□□ -2.2
USP47-206ENST00000525367 SMCO4Q9NRQ5 59 aa1.29□□□□□ -2.2
USP47-206ENST00000525367 CACNA1CQ13936 2221 aa1.29□□□□□ -2.2
USP47-206ENST00000525367 C5P01031 1676 aa1.29□□□□□ -2.2
USP47-206ENST00000525367 CRYBG1Q9Y4K1 1723 aa1.29□□□□□ -2.2
USP47-206ENST00000525367 DEFB121Q5J5C9 76 aa1.28□□□□□ -2.2
USP47-206ENST00000525367 ATP5EP2Q5VTU8 51 aa1.28□□□□□ -2.2
USP47-206ENST00000525367 USMG5Q96IX5 58 aa1.28□□□□□ -2.2
USP47-206ENST00000525367 LAMC1P11047 1609 aa1.28□□□□□ -2.2
USP47-206ENST00000525367 FXYD6-FXYD2A0A087WZ82 144 aa1.27□□□□□ -2.21
USP47-206ENST00000525367 NDUFB1O75438 58 aa1.27□□□□□ -2.21
USP47-206ENST00000525367 SMIM13P0DJ93 91 aa1.27□□□□□ -2.21
USP47-206ENST00000525367 PRB3Q04118 309 aaPredicted RBP1.27□□□□□ -2.21
USP47-206ENST00000525367 DEFB123Q8N688 67 aa1.26□□□□□ -2.21
USP47-206ENST00000525367 FAM208BQ5VWN6 2430 aa1.26□□□□□ -2.21
USP47-206ENST00000525367 A0A087WXM4 84 aa1.25□□□□□ -2.21
USP47-206ENST00000525367 PDCD5O14737 125 aa1.25□□□□□ -2.21
USP47-206ENST00000525367 GAFA1Q96PS6 74 aa1.25□□□□□ -2.21
USP47-206ENST00000525367 AHCTF1Q8WYP5 2266 aa1.25□□□□□ -2.21
USP47-206ENST00000525367 NHSL1Q5SYE7 1610 aa1.25□□□□□ -2.21
USP47-206ENST00000525367 CFAP74Q9C0B2 1584 aa1.25□□□□□ -2.21
USP47-206ENST00000525367 URB2Q14146 1524 aaKnown RBP1.25□□□□□ -2.21
USP47-206ENST00000525367 NKTRP30414 1462 aaKnown RBP1.24□□□□□ -2.21
USP47-206ENST00000525367 NCOA2Q15596 1464 aa1.24□□□□□ -2.21
USP47-206ENST00000525367 CRIPTQ9P021 101 aa1.24□□□□□ -2.21
USP47-206ENST00000525367 ALKQ9UM73 1620 aa1.24□□□□□ -2.21
USP47-206ENST00000525367 ZNF462Q96JM2 2506 aa1.24□□□□□ -2.21
USP47-206ENST00000525367 PAPPA2Q9BXP8 1791 aa1.24□□□□□ -2.21
USP47-206ENST00000525367 TMEM131LA2VDJ0 1609 aa1.23□□□□□ -2.21
USP47-206ENST00000525367 PAPPAQ13219 1627 aa1.23□□□□□ -2.21
USP47-206ENST00000525367 CFDP00746 253 aaPredicted RBP1.23□□□□□ -2.21
USP47-206ENST00000525367 DEFA5Q01523 94 aa1.23□□□□□ -2.21
USP47-206ENST00000525367 WFDC9Q8NEX5 89 aa1.23□□□□□ -2.21
USP47-206ENST00000525367 KIAA0556O60303 1618 aa1.22□□□□□ -2.21
USP47-206ENST00000525367 GOLGA4Q13439 2230 aaKnown RBP1.22□□□□□ -2.21
USP47-206ENST00000525367 TRAV21A0A0B4J279 112 aa1.22□□□□□ -2.21
USP47-206ENST00000525367 UMAD1C9J7I0 102 aa1.22□□□□□ -2.21
USP47-206ENST00000525367 FBN3Q75N90 2809 aa1.22□□□□□ -2.21
USP47-206ENST00000525367 SPTY2D1-AS1A0A0U1RR47 76 aa1.21□□□□□ -2.22
USP47-206ENST00000525367 COX8AP10176 69 aa1.21□□□□□ -2.22
USP47-206ENST00000525367 COX7BP24311 80 aa1.21□□□□□ -2.22
USP47-206ENST00000525367 RPL38P63173 70 aaKnown RBP1.21□□□□□ -2.22
USP47-206ENST00000525367 PTPN23Q9H3S7 1636 aa1.21□□□□□ -2.22
USP47-206ENST00000525367 SLIT1O75093 1534 aa1.2□□□□□ -2.22
USP47-206ENST00000525367 K7EQZ3 153 aa1.2□□□□□ -2.22
USP47-206ENST00000525367 COX6B1P14854 86 aa1.2□□□□□ -2.22
USP47-206ENST00000525367 IFI27P40305 119 aaPredicted RBP1.2□□□□□ -2.22
USP47-206ENST00000525367 LRRC7Q96NW7 1537 aa1.2□□□□□ -2.22
USP47-206ENST00000525367 LRRC37AA6NMS7 1700 aa1.19□□□□□ -2.22
USP47-206ENST00000525367 I3L3M4 83 aa1.19□□□□□ -2.22
USP47-206ENST00000525367 TENM1Q9UKZ4 2725 aa1.18□□□□□ -2.22
USP47-206ENST00000525367 CCDC88BA6NC98 1476 aa1.18□□□□□ -2.22
USP47-206ENST00000525367 PKD1L3Q7Z443 1732 aa1.17□□□□□ -2.22
USP47-206ENST00000525367 SPINK6Q6UWN8 80 aa1.16□□□□□ -2.22
USP47-206ENST00000525367 ABCA8O94911 1581 aa1.16□□□□□ -2.22
USP47-206ENST00000525367 IFI6P09912 130 aa1.15□□□□□ -2.23
USP47-206ENST00000525367 Q5VSD8 79 aa1.15□□□□□ -2.23
USP47-206ENST00000525367 ANKRD17O75179 2603 aaKnown RBP1.15□□□□□ -2.23
USP47-206ENST00000525367 BIVM-ERCC5R4GMW8 1640 aa1.15□□□□□ -2.23
USP47-206ENST00000525367 CACNA1HO95180 2353 aa1.14□□□□□ -2.23
USP47-206ENST00000525367 UGGT2Q9NYU1 1516 aa1.14□□□□□ -2.23
USP47-206ENST00000525367 CPSF4LA6NMK7 179 aaKnown RBP1.13□□□□□ -2.23
USP47-206ENST00000525367 PIK3C2BO00750 1634 aa1.13□□□□□ -2.23
USP47-206ENST00000525367 DUOX2Q9NRD8 1548 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms