RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 SEC11AP67812 179 aa7.97□□□□□ -1.13
TRAPPC4-205ENST00000525079 C6orf226Q5I0X4 101 aa7.97□□□□□ -1.13
TRAPPC4-205ENST00000525079 PACRGQ96M98 296 aaPredicted RBP7.97□□□□□ -1.13
TRAPPC4-205ENST00000525079 TRBV30A0A0K0K1B3 111 aa7.96□□□□□ -1.14
TRAPPC4-205ENST00000525079 CKS1BP61024 79 aa7.96□□□□□ -1.14
TRAPPC4-205ENST00000525079 LINC00469Q8N7U9 141 aa7.96□□□□□ -1.14
TRAPPC4-205ENST00000525079 C18orf32Q8TCD1 76 aa7.96□□□□□ -1.14
TRAPPC4-205ENST00000525079 URB1-AS1Q96HZ7 61 aa7.96□□□□□ -1.14
TRAPPC4-205ENST00000525079 CST9LQ9H4G1 147 aa7.96□□□□□ -1.14
TRAPPC4-205ENST00000525079 FAM19A5Q7Z5A7 132 aaPredicted RBP7.95□□□□□ -1.14
TRAPPC4-205ENST00000525079 TINCRA0A1B0GVN0 87 aa7.94□□□□□ -1.14
TRAPPC4-205ENST00000525079 LINC01549A6NIU2 74 aa7.94□□□□□ -1.14
TRAPPC4-205ENST00000525079 LINC00614P0C842 121 aa7.94□□□□□ -1.14
TRAPPC4-205ENST00000525079 MT1HL1P0DM35 61 aa7.94□□□□□ -1.14
TRAPPC4-205ENST00000525079 PMVKQ15126 192 aa7.94□□□□□ -1.14
TRAPPC4-205ENST00000525079 PMCHL1Q16048 86 aa7.94□□□□□ -1.14
TRAPPC4-205ENST00000525079 Q8IZM0 81 aa7.94□□□□□ -1.14
TRAPPC4-205ENST00000525079 PSORS1C2Q9UIG4 136 aa7.94□□□□□ -1.14
TRAPPC4-205ENST00000525079 A0A096LNJ9 63 aa7.93□□□□□ -1.14
TRAPPC4-205ENST00000525079 NDUFC2-KCTD14E9PQ53 114 aa7.93□□□□□ -1.14
TRAPPC4-205ENST00000525079 NDUFA6P56556 154 aa7.93□□□□□ -1.14
TRAPPC4-205ENST00000525079 SMIM1B2RUZ4 78 aa7.92□□□□□ -1.14
TRAPPC4-205ENST00000525079 SPINK8P0C7L1 97 aa7.92□□□□□ -1.14
TRAPPC4-205ENST00000525079 SRSF9Q13242 221 aaKnown RBP eCLIP7.92□□□□□ -1.14
TRAPPC4-205ENST00000525079 C9orf129Q5T035 196 aaKnown RBP7.92□□□□□ -1.14
TRAPPC4-205ENST00000525079 SPINK6Q6UWN8 80 aa7.92□□□□□ -1.14
TRAPPC4-205ENST00000525079 KRTAP11-1Q8IUC1 163 aa7.92□□□□□ -1.14
TRAPPC4-205ENST00000525079 KRTAP7-1Q8IUC3 87 aa7.92□□□□□ -1.14
TRAPPC4-205ENST00000525079 YPEL4Q96NS1 127 aa7.92□□□□□ -1.14
TRAPPC4-205ENST00000525079 C1orf137Q5JT78 98 aa7.91□□□□□ -1.14
TRAPPC4-205ENST00000525079 IGLV5-45A0A087WSX0 123 aa7.9□□□□□ -1.14
TRAPPC4-205ENST00000525079 F8VRH5 84 aa7.9□□□□□ -1.14
TRAPPC4-205ENST00000525079 HBDP02042 147 aa7.9□□□□□ -1.14
TRAPPC4-205ENST00000525079 PDZD11Q5EBL8 140 aa7.9□□□□□ -1.14
TRAPPC4-205ENST00000525079 COX7B2Q8TF08 81 aa7.9□□□□□ -1.14
TRAPPC4-205ENST00000525079 M0QXV9 152 aa7.89□□□□□ -1.15
TRAPPC4-205ENST00000525079 SERTAD4-AS1Q5TG53 156 aa7.89□□□□□ -1.15
TRAPPC4-205ENST00000525079 CBLN2Q8IUK8 224 aa7.89□□□□□ -1.15
TRAPPC4-205ENST00000525079 SLC7A5P1Q8MH63 180 aa7.89□□□□□ -1.15
TRAPPC4-205ENST00000525079 XAGE1AQ9HD64 81 aa7.89□□□□□ -1.15
TRAPPC4-205ENST00000525079 RAB5BP61020 215 aa7.88□□□□□ -1.15
TRAPPC4-205ENST00000525079 LINC01600Q96MT4 127 aa7.88□□□□□ -1.15
TRAPPC4-205ENST00000525079 H3BRM9 83 aa7.87□□□□□ -1.15
TRAPPC4-205ENST00000525079 IGLC3P0DOY3 106 aa7.87□□□□□ -1.15
TRAPPC4-205ENST00000525079 CXCL5P42830 114 aa7.87□□□□□ -1.15
TRAPPC4-205ENST00000525079 UBE2BP63146 152 aa7.87□□□□□ -1.15
TRAPPC4-205ENST00000525079 REG3GQ6UW15 175 aa7.87□□□□□ -1.15
TRAPPC4-205ENST00000525079 ZNF22P17026 224 aaPredicted RBP7.86□□□□□ -1.15
TRAPPC4-205ENST00000525079 ODF1Q14990 250 aa7.86□□□□□ -1.15
TRAPPC4-205ENST00000525079 BAGE3Q86Y29 109 aa7.86□□□□□ -1.15
TRAPPC4-205ENST00000525079 ATP5LO75964 103 aa7.85□□□□□ -1.15
TRAPPC4-205ENST00000525079 IGLV7-43P04211 117 aa7.85□□□□□ -1.15
TRAPPC4-205ENST00000525079 C22orf24Q9Y442 160 aa7.85□□□□□ -1.15
TRAPPC4-205ENST00000525079 C11orf86A6NJI1 115 aa7.84□□□□□ -1.15
TRAPPC4-205ENST00000525079 CHCHD1Q96BP2 118 aaKnown RBP7.83□□□□□ -1.16
TRAPPC4-205ENST00000525079 PLA2G2DQ9UNK4 145 aa7.83□□□□□ -1.16
TRAPPC4-205ENST00000525079 IGLV5-39A0A0G2JS06 123 aa7.82□□□□□ -1.16
TRAPPC4-205ENST00000525079 TRGC2P03986 189 aa7.82□□□□□ -1.16
TRAPPC4-205ENST00000525079 KRTAP10-8P60410 259 aa7.82□□□□□ -1.16
TRAPPC4-205ENST00000525079 TMEM170BQ5T4T1 132 aa7.82□□□□□ -1.16
TRAPPC4-205ENST00000525079 FAM19A2Q8N3H0 131 aa7.82□□□□□ -1.16
TRAPPC4-205ENST00000525079 CHTOPQ9Y3Y2 248 aaKnown RBP7.82□□□□□ -1.16
TRAPPC4-205ENST00000525079 PFN2P35080 140 aa7.81□□□□□ -1.16
TRAPPC4-205ENST00000525079 IFI27L1Q96BM0 104 aa7.81□□□□□ -1.16
TRAPPC4-205ENST00000525079 LBHQ53QV2 105 aaPredicted RBP7.8□□□□□ -1.16
TRAPPC4-205ENST00000525079 DIRC1Q969H9 104 aa7.8□□□□□ -1.16
TRAPPC4-205ENST00000525079 ZNF625Q96I27 306 aaPredicted RBP7.8□□□□□ -1.16
TRAPPC4-205ENST00000525079 HSBP1O75506 76 aa7.79□□□□□ -1.16
TRAPPC4-205ENST00000525079 MRPL55Q7Z7F7 128 aaKnown RBP7.79□□□□□ -1.16
TRAPPC4-205ENST00000525079 GAGE10A6NGK3 116 aa7.78□□□□□ -1.16
TRAPPC4-205ENST00000525079 RPL37AP8A6NKH3 93 aa7.78□□□□□ -1.16
TRAPPC4-205ENST00000525079 H0Y9J4 135 aa7.78□□□□□ -1.16
TRAPPC4-205ENST00000525079 ATP6V1G1O75348 118 aa7.78□□□□□ -1.16
TRAPPC4-205ENST00000525079 LINC00167Q96N53 147 aa7.78□□□□□ -1.16
TRAPPC4-205ENST00000525079 TNXBP22105 4242 aa7.77□□□□□ -1.17
TRAPPC4-205ENST00000525079 TRAV12-1A0A0B4J245 112 aa7.77□□□□□ -1.17
TRAPPC4-205ENST00000525079 COLCA2A8K830 154 aa7.77□□□□□ -1.17
TRAPPC4-205ENST00000525079 H0Y8G0 127 aa7.77□□□□□ -1.17
TRAPPC4-205ENST00000525079 TP73-AS1Q9UF72 201 aa7.77□□□□□ -1.17
TRAPPC4-205ENST00000525079 ERG28Q9UKR5 140 aa7.77□□□□□ -1.17
TRAPPC4-205ENST00000525079 TMEM223A0PJW6 202 aa7.76□□□□□ -1.17
TRAPPC4-205ENST00000525079 SCO1O75880 301 aa7.76□□□□□ -1.17
TRAPPC4-205ENST00000525079 SERF1AO75920 110 aa7.76□□□□□ -1.17
TRAPPC4-205ENST00000525079 LINC00310P59036 64 aa7.76□□□□□ -1.17
TRAPPC4-205ENST00000525079 PRR26Q8N8Z3 221 aa7.76□□□□□ -1.17
TRAPPC4-205ENST00000525079 HMCN2Q8NDA2 5059 aa7.76□□□□□ -1.17
TRAPPC4-205ENST00000525079 NUPR1O60356 82 aa7.75□□□□□ -1.17
TRAPPC4-205ENST00000525079 NKAPP1Q8N9T2 125 aa7.75□□□□□ -1.17
TRAPPC4-205ENST00000525079 SND1-IT1Q9HBX3 110 aa7.75□□□□□ -1.17
TRAPPC4-205ENST00000525079 A0A0U1RRA0 63 aa7.74□□□□□ -1.17
TRAPPC4-205ENST00000525079 ZNF861PO60384 105 aa7.74□□□□□ -1.17
TRAPPC4-205ENST00000525079 IGLV5-37A0A075B6J1 123 aa7.73□□□□□ -1.17
TRAPPC4-205ENST00000525079 LEPROTL1O95214 131 aa7.73□□□□□ -1.17
TRAPPC4-205ENST00000525079 FABP4P15090 132 aa7.73□□□□□ -1.17
TRAPPC4-205ENST00000525079 BCE1O60756 84 aa7.72□□□□□ -1.17
TRAPPC4-205ENST00000525079 KRTAP1-4P0C5Y4 121 aa7.72□□□□□ -1.17
TRAPPC4-205ENST00000525079 LINC00158P58513 81 aa7.72□□□□□ -1.17
TRAPPC4-205ENST00000525079 COX17Q14061 63 aa7.72□□□□□ -1.17
TRAPPC4-205ENST00000525079 IGKV2-28A0A075B6P5 120 aa7.71□□□□□ -1.18
TRAPPC4-205ENST00000525079 IGKV2D-28P01615 120 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms