RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-238ENST00000523298 CACNA1GO43497 2377 aa2.35□□□□□ -2.03
CTNNA1-238ENST00000523298 MED12Q93074 2177 aa2.34□□□□□ -2.03
CTNNA1-238ENST00000523298 PCNX1Q96RV3 2341 aa2.34□□□□□ -2.03
CTNNA1-238ENST00000523298 IGLV10-54A0A075B6I4 117 aa2.34□□□□□ -2.03
CTNNA1-238ENST00000523298 IGKV3D-11A0A0A0MRZ8 115 aa2.34□□□□□ -2.03
CTNNA1-238ENST00000523298 TMEM30CPA0ZSE6 113 aa2.34□□□□□ -2.03
CTNNA1-238ENST00000523298 COX6CP09669 75 aa2.34□□□□□ -2.03
CTNNA1-238ENST00000523298 EDDM3BP56851 147 aa2.34□□□□□ -2.03
CTNNA1-238ENST00000523298 DEFB113Q30KQ7 82 aa2.34□□□□□ -2.03
CTNNA1-238ENST00000523298 KPRPQ5T749 579 aaPredicted RBP2.34□□□□□ -2.03
CTNNA1-238ENST00000523298 MYO7BQ6PIF6 2116 aa2.34□□□□□ -2.03
CTNNA1-238ENST00000523298 ZNF818PQ6ZRF7 136 aa2.34□□□□□ -2.03
CTNNA1-238ENST00000523298 NDUFA11Q86Y39 141 aa2.34□□□□□ -2.03
CTNNA1-238ENST00000523298 ST20-AS1Q8NBB2 130 aa2.34□□□□□ -2.03
CTNNA1-238ENST00000523298 KLF14Q8TD94 323 aaPredicted RBP2.34□□□□□ -2.03
CTNNA1-238ENST00000523298 ACACBO00763 2458 aa2.34□□□□□ -2.04
CTNNA1-238ENST00000523298 DIDO1Q9BTC0 2240 aaKnown RBP2.34□□□□□ -2.04
CTNNA1-238ENST00000523298 DCHS1Q96JQ0 3298 aa2.34□□□□□ -2.04
CTNNA1-238ENST00000523298 CACNA1AO00555 2505 aa2.33□□□□□ -2.04
CTNNA1-238ENST00000523298 CEP295Q9C0D2 2601 aa2.33□□□□□ -2.04
CTNNA1-238ENST00000523298 ANKRD11Q6UB99 2663 aaPredicted RBP2.33□□□□□ -2.04
CTNNA1-238ENST00000523298 TMSB15BA0A087X1C1 80 aa2.33□□□□□ -2.04
CTNNA1-238ENST00000523298 TRAV10A0A0B4J240 114 aa2.33□□□□□ -2.04
CTNNA1-238ENST00000523298 CEBPZOSA8MTT3 80 aa2.33□□□□□ -2.04
CTNNA1-238ENST00000523298 TMEM14DPA8MWL7 114 aa2.33□□□□□ -2.04
CTNNA1-238ENST00000523298 ODF3BA8MYP8 253 aa2.33□□□□□ -2.04
CTNNA1-238ENST00000523298 CHKB-CPT1BH3BT56 60 aa2.33□□□□□ -2.04
CTNNA1-238ENST00000523298 IGHV3-53P01767 116 aa2.33□□□□□ -2.04
CTNNA1-238ENST00000523298 PLGLAQ15195 96 aa2.33□□□□□ -2.04
CTNNA1-238ENST00000523298 SPANXN5Q5MJ07 72 aa2.33□□□□□ -2.04
CTNNA1-238ENST00000523298 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.33□□□□□ -2.04
CTNNA1-238ENST00000523298 Q8NAQ8 132 aa2.33□□□□□ -2.04
CTNNA1-238ENST00000523298 LIMD2Q9BT23 127 aa2.33□□□□□ -2.04
CTNNA1-238ENST00000523298 CDC42SE2Q9NRR3 84 aa2.33□□□□□ -2.04
CTNNA1-238ENST00000523298 PSENENQ9NZ42 101 aa2.33□□□□□ -2.04
CTNNA1-238ENST00000523298 C22orf24Q9Y442 160 aa2.33□□□□□ -2.04
CTNNA1-238ENST00000523298 MINOS1-NBL1R4GNA1 71 aa2.33□□□□□ -2.04
CTNNA1-238ENST00000523298 ESPL1Q14674 2120 aa2.33□□□□□ -2.04
CTNNA1-238ENST00000523298 TRAV12-3A0A0B4J271 114 aa2.32□□□□□ -2.04
CTNNA1-238ENST00000523298 H0YGG7 62 aa2.32□□□□□ -2.04
CTNNA1-238ENST00000523298 ERC2-IT1O76042 136 aa2.32□□□□□ -2.04
CTNNA1-238ENST00000523298 BAALC-AS2P0C853 105 aa2.32□□□□□ -2.04
CTNNA1-238ENST00000523298 UBE2D1P51668 147 aa2.32□□□□□ -2.04
CTNNA1-238ENST00000523298 KRTAP10-1P60331 282 aa2.32□□□□□ -2.04
CTNNA1-238ENST00000523298 C10orf128Q5T292 105 aa2.32□□□□□ -2.04
CTNNA1-238ENST00000523298 PRR9Q5T870 116 aa2.32□□□□□ -2.04
CTNNA1-238ENST00000523298 TOMM5Q8N4H5 51 aa2.32□□□□□ -2.04
CTNNA1-238ENST00000523298 TMEM254Q8TBM7 123 aa2.32□□□□□ -2.04
CTNNA1-238ENST00000523298 TMEM14BQ9NUH8 114 aa2.32□□□□□ -2.04
CTNNA1-238ENST00000523298 NBASA2RRP1 2371 aa2.32□□□□□ -2.04
CTNNA1-238ENST00000523298 RP1L1Q8IWN7 2480 aaPredicted RBP2.32□□□□□ -2.04
CTNNA1-238ENST00000523298 WDFY3Q8IZQ1 3526 aa2.31□□□□□ -2.04
CTNNA1-238ENST00000523298 ZFHX4Q86UP3 3567 aa2.31□□□□□ -2.04
CTNNA1-238ENST00000523298 PIEZO2Q9H5I5 2752 aa2.31□□□□□ -2.04
CTNNA1-238ENST00000523298 TRAV23DV6A0A075B6W5 121 aa2.31□□□□□ -2.04
CTNNA1-238ENST00000523298 IGHV3OR16-8A0A075B7F1 116 aa2.31□□□□□ -2.04
CTNNA1-238ENST00000523298 A0A1B0GU33 70 aa2.31□□□□□ -2.04
CTNNA1-238ENST00000523298 LOC101927531A0A1B0GV80 90 aa2.31□□□□□ -2.04
CTNNA1-238ENST00000523298 A0A1W2PNM2 257 aa2.31□□□□□ -2.04
CTNNA1-238ENST00000523298 ZNF815PA8K554 130 aa2.31□□□□□ -2.04
CTNNA1-238ENST00000523298 H3BVH4 76 aa2.31□□□□□ -2.04
CTNNA1-238ENST00000523298 IGLV7-43P04211 117 aa2.31□□□□□ -2.04
CTNNA1-238ENST00000523298 IFI27P40305 119 aaPredicted RBP2.31□□□□□ -2.04
CTNNA1-238ENST00000523298 DEFB134Q4QY38 66 aa2.31□□□□□ -2.04
CTNNA1-238ENST00000523298 KRTAP26-1Q6PEX3 210 aa2.31□□□□□ -2.04
CTNNA1-238ENST00000523298 HEATR1Q9H583 2144 aaKnown RBP2.31□□□□□ -2.04
CTNNA1-238ENST00000523298 GNG13Q9P2W3 67 aa2.31□□□□□ -2.04
CTNNA1-238ENST00000523298 UBE2D4Q9Y2X8 147 aa2.31□□□□□ -2.04
CTNNA1-238ENST00000523298 INTS1Q8N201 2190 aaKnown RBP2.31□□□□□ -2.04
CTNNA1-238ENST00000523298 USP24Q9UPU5 2620 aa2.31□□□□□ -2.04
CTNNA1-238ENST00000523298 ASPMQ8IZT6 3477 aa2.3□□□□□ -2.04
CTNNA1-238ENST00000523298 FREM1Q5H8C1 2179 aa2.3□□□□□ -2.04
CTNNA1-238ENST00000523298 CACNA1CQ13936 2221 aa2.3□□□□□ -2.04
CTNNA1-238ENST00000523298 FRYQ5TBA9 3013 aa2.3□□□□□ -2.04
CTNNA1-238ENST00000523298 CELSR3Q9NYQ7 3312 aa2.3□□□□□ -2.04
CTNNA1-238ENST00000523298 RPL38P63173 70 aaKnown RBP2.3□□□□□ -2.04
CTNNA1-238ENST00000523298 DEFB109BQ30KR1 87 aa2.3□□□□□ -2.04
CTNNA1-238ENST00000523298 ZNF833PQ6ZTB9 187 aa2.3□□□□□ -2.04
CTNNA1-238ENST00000523298 LYPD6Q86Y78 171 aa2.3□□□□□ -2.04
CTNNA1-238ENST00000523298 CLECL1Q8IZS7 167 aa2.3□□□□□ -2.04
CTNNA1-238ENST00000523298 NDUFA4L2Q9NRX3 87 aa2.3□□□□□ -2.04
CTNNA1-238ENST00000523298 PKD1L2Q7Z442 2459 aa2.3□□□□□ -2.04
CTNNA1-238ENST00000523298 IGHV3-64A0A075B6Q5 118 aa2.29□□□□□ -2.04
CTNNA1-238ENST00000523298 CLPSL1A2RUU4 121 aa2.29□□□□□ -2.04
CTNNA1-238ENST00000523298 PSCAO43653 123 aa2.29□□□□□ -2.04
CTNNA1-238ENST00000523298 IGKV1-17P01599 117 aa2.29□□□□□ -2.04
CTNNA1-238ENST00000523298 ATP5EP2Q5VTU8 51 aa2.29□□□□□ -2.04
CTNNA1-238ENST00000523298 CSAG1Q6PB30 78 aa2.29□□□□□ -2.04
CTNNA1-238ENST00000523298 HIVEP3Q5T1R4 2406 aa2.29□□□□□ -2.04
CTNNA1-238ENST00000523298 FAM208BQ5VWN6 2430 aa2.29□□□□□ -2.04
CTNNA1-238ENST00000523298 SPTBN1Q01082 2364 aaKnown RBP2.29□□□□□ -2.04
CTNNA1-238ENST00000523298 DOPEY2Q9Y3R5 2298 aa2.29□□□□□ -2.04
CTNNA1-238ENST00000523298 LAMA5O15230 3695 aa2.28□□□□□ -2.04
CTNNA1-238ENST00000523298 EPG5Q9HCE0 2579 aa2.28□□□□□ -2.04
CTNNA1-238ENST00000523298 ZFYVE26Q68DK2 2539 aa2.28□□□□□ -2.04
CTNNA1-238ENST00000523298 MGAQ8IWI9 3026 aa2.28□□□□□ -2.04
CTNNA1-238ENST00000523298 TRBV6-8A0A0A6YYG3 113 aa2.28□□□□□ -2.04
CTNNA1-238ENST00000523298 TRAV12-1A0A0B4J245 112 aa2.28□□□□□ -2.04
CTNNA1-238ENST00000523298 TRBV10-1A0A0K0K1A3 114 aa2.28□□□□□ -2.04
CTNNA1-238ENST00000523298 IGHV3-33P01772 117 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms