RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 A0A0U1RRA0 63 aa10.34□□□□□ -0.75
CTNNA1-236ENST00000522792 TMEM238C9JI98 176 aa10.34□□□□□ -0.75
CTNNA1-236ENST00000522792 ADAMTSL4-AS1Q5T5F5 129 aa10.34□□□□□ -0.75
CTNNA1-236ENST00000522792 KRTAP26-1Q6PEX3 210 aa10.34□□□□□ -0.75
CTNNA1-236ENST00000522792 Q8IZM0 81 aa10.34□□□□□ -0.75
CTNNA1-236ENST00000522792 TM2D2Q9BX73 214 aa10.34□□□□□ -0.75
CTNNA1-236ENST00000522792 IBA57-AS1B1ANH7 110 aa10.33□□□□□ -0.76
CTNNA1-236ENST00000522792 MEIG1Q5JSS6 88 aa10.33□□□□□ -0.76
CTNNA1-236ENST00000522792 HERV-K104P63124 156 aa10.33□□□□□ -0.76
CTNNA1-236ENST00000522792 VAMP3Q15836 100 aa10.33□□□□□ -0.76
CTNNA1-236ENST00000522792 RNF151Q2KHN1 245 aa10.33□□□□□ -0.76
CTNNA1-236ENST00000522792 C2orf82Q6UX34 121 aa10.33□□□□□ -0.76
CTNNA1-236ENST00000522792 DAND5Q8N907 189 aa10.33□□□□□ -0.76
CTNNA1-236ENST00000522792 LYSTQ99698 3801 aa10.32□□□□□ -0.76
CTNNA1-236ENST00000522792 APOMO95445 188 aa10.32□□□□□ -0.76
CTNNA1-236ENST00000522792 NPC2P61916 151 aa10.32□□□□□ -0.76
CTNNA1-236ENST00000522792 KIAA0087Q14695 138 aa10.32□□□□□ -0.76
CTNNA1-236ENST00000522792 CFAP161Q6P656 301 aa10.32□□□□□ -0.76
CTNNA1-236ENST00000522792 LINC00526Q96FQ7 95 aa10.32□□□□□ -0.76
CTNNA1-236ENST00000522792 VPS25Q9BRG1 176 aa10.31□□□□□ -0.76
CTNNA1-236ENST00000522792 SPAG11BQ08648 103 aa10.31□□□□□ -0.76
CTNNA1-236ENST00000522792 STARD9Q9P2P6 4700 aa10.31□□□□□ -0.76
CTNNA1-236ENST00000522792 PLECQ15149 4684 aaKnown RBP10.3□□□□□ -0.76
CTNNA1-236ENST00000522792 TIMM17BO60830 172 aa10.3□□□□□ -0.76
CTNNA1-236ENST00000522792 SMIM13P0DJ93 91 aa10.3□□□□□ -0.76
CTNNA1-236ENST00000522792 CKS1BP61024 79 aa10.3□□□□□ -0.76
CTNNA1-236ENST00000522792 CIRBPQ14011 172 aaKnown RBP10.3□□□□□ -0.76
CTNNA1-236ENST00000522792 MUSTN1Q8IVN3 82 aa10.3□□□□□ -0.76
CTNNA1-236ENST00000522792 C6orf223Q8N319 242 aa10.3□□□□□ -0.76
CTNNA1-236ENST00000522792 NHP2Q9NX24 153 aaKnown RBP10.3□□□□□ -0.76
CTNNA1-236ENST00000522792 A6NDN8 102 aa10.29□□□□□ -0.76
CTNNA1-236ENST00000522792 K7ERJ3 54 aa10.29□□□□□ -0.76
CTNNA1-236ENST00000522792 SPANXDQ9BXN6 97 aa10.29□□□□□ -0.76
CTNNA1-236ENST00000522792 KRTAP1-5Q9BYS1 174 aa10.29□□□□□ -0.76
CTNNA1-236ENST00000522792 SPANXCQ9NY87 97 aa10.29□□□□□ -0.76
CTNNA1-236ENST00000522792 DNAH1Q9P2D7 4330 aa10.29□□□□□ -0.76
CTNNA1-236ENST00000522792 HIGD2BQ4VC39 106 aa10.28□□□□□ -0.76
CTNNA1-236ENST00000522792 MUC7Q8TAX7 377 aa10.28□□□□□ -0.76
CTNNA1-236ENST00000522792 TMEM238LA0A1B0GVL6 79 aa10.28□□□□□ -0.76
CTNNA1-236ENST00000522792 OCIAD2Q56VL3 154 aa10.28□□□□□ -0.76
CTNNA1-236ENST00000522792 PFN2P35080 140 aa10.27□□□□□ -0.77
CTNNA1-236ENST00000522792 RAB37Q96AX2 223 aa10.27□□□□□ -0.77
CTNNA1-236ENST00000522792 EIF4EBP3O60516 100 aaPredicted RBP10.26□□□□□ -0.77
CTNNA1-236ENST00000522792 CASC10Q5T4H9 136 aa10.26□□□□□ -0.77
CTNNA1-236ENST00000522792 SFTA2Q6UW10 78 aa10.26□□□□□ -0.77
CTNNA1-236ENST00000522792 C15orf56Q8N910 161 aa10.26□□□□□ -0.77
CTNNA1-236ENST00000522792 CXCL5P42830 114 aa10.26□□□□□ -0.77
CTNNA1-236ENST00000522792 LINC00158P58513 81 aa10.26□□□□□ -0.77
CTNNA1-236ENST00000522792 ERG28Q9UKR5 140 aa10.26□□□□□ -0.77
CTNNA1-236ENST00000522792 A4D1N5 150 aa10.25□□□□□ -0.77
CTNNA1-236ENST00000522792 A6NJY4 79 aa10.25□□□□□ -0.77
CTNNA1-236ENST00000522792 C10orf25Q5T742 122 aa10.25□□□□□ -0.77
CTNNA1-236ENST00000522792 UNQ6190/PRO20217Q6UXQ8 127 aa10.25□□□□□ -0.77
CTNNA1-236ENST00000522792 K7ERU9 68 aa10.24□□□□□ -0.77
CTNNA1-236ENST00000522792 MIR7-3HGQ8N6C7 128 aa10.24□□□□□ -0.77
CTNNA1-236ENST00000522792 RMI2Q96E14 147 aa10.24□□□□□ -0.77
CTNNA1-236ENST00000522792 RPL24P83731 157 aaKnown RBP10.24□□□□□ -0.77
CTNNA1-236ENST00000522792 C9orf116Q5BN46 136 aaPredicted RBP10.24□□□□□ -0.77
CTNNA1-236ENST00000522792 LINC00308Q8TCZ7 52 aa10.24□□□□□ -0.77
CTNNA1-236ENST00000522792 TENM2Q9NT68 2774 aa10.24□□□□□ -0.77
CTNNA1-236ENST00000522792 ZNF561-AS1K7EIQ3 104 aa10.23□□□□□ -0.77
CTNNA1-236ENST00000522792 SOSTDC1Q6X4U4 206 aa10.23□□□□□ -0.77
CTNNA1-236ENST00000522792 NTN5Q8WTR8 489 aaPredicted RBP10.23□□□□□ -0.77
CTNNA1-236ENST00000522792 WWC2-AS2Q96NR7 200 aa10.23□□□□□ -0.77
CTNNA1-236ENST00000522792 IFITM1P13164 125 aa10.22□□□□□ -0.77
CTNNA1-236ENST00000522792 NAA38Q9BRA0 125 aaKnown RBP10.22□□□□□ -0.77
CTNNA1-236ENST00000522792 TGP01266 2768 aa10.21□□□□□ -0.77
CTNNA1-236ENST00000522792 CFC1BP0CG36 223 aa10.21□□□□□ -0.77
CTNNA1-236ENST00000522792 CFC1P0CG37 223 aa10.21□□□□□ -0.77
CTNNA1-236ENST00000522792 A0A1B0GWB2 263 aa10.21□□□□□ -0.78
CTNNA1-236ENST00000522792 CAMK2N2Q96S95 79 aa10.21□□□□□ -0.78
CTNNA1-236ENST00000522792 NBDYA0A0U1RRE5 68 aa10.2□□□□□ -0.78
CTNNA1-236ENST00000522792 LECT2O14960 151 aa10.2□□□□□ -0.78
CTNNA1-236ENST00000522792 GVQW2A0A096LPI5 108 aaPredicted RBP10.19□□□□□ -0.78
CTNNA1-236ENST00000522792 USP17L23D6RBM5 183 aa10.19□□□□□ -0.78
CTNNA1-236ENST00000522792 VPS13DQ5THJ4 4388 aa10.19□□□□□ -0.78
CTNNA1-236ENST00000522792 TTC32Q5I0X7 151 aa10.19□□□□□ -0.78
CTNNA1-236ENST00000522792 C6orf48Q9UBA6 75 aa10.19□□□□□ -0.78
CTNNA1-236ENST00000522792 M0R2N4 97 aa10.18□□□□□ -0.78
CTNNA1-236ENST00000522792 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.17□□□□□ -0.78
CTNNA1-236ENST00000522792 C9orf118A6NHY6 69 aa10.17□□□□□ -0.78
CTNNA1-236ENST00000522792 H3BUT2 72 aa10.17□□□□□ -0.78
CTNNA1-236ENST00000522792 Q6ZRU5 148 aa10.17□□□□□ -0.78
CTNNA1-236ENST00000522792 PSCAO43653 123 aa10.17□□□□□ -0.78
CTNNA1-236ENST00000522792 COPS9Q8WXC6 57 aa10.17□□□□□ -0.78
CTNNA1-236ENST00000522792 COX17Q14061 63 aa10.16□□□□□ -0.78
CTNNA1-236ENST00000522792 C2orf48Q96LS8 159 aa10.16□□□□□ -0.78
CTNNA1-236ENST00000522792 A0A0B4J2C4 111 aa10.16□□□□□ -0.78
CTNNA1-236ENST00000522792 GAGE10A6NGK3 116 aa10.16□□□□□ -0.78
CTNNA1-236ENST00000522792 PRO1854Q9UHT4 67 aa10.15□□□□□ -0.78
CTNNA1-236ENST00000522792 WFDC2Q14508 124 aa10.14□□□□□ -0.79
CTNNA1-236ENST00000522792 GTF2H5Q6ZYL4 71 aa10.14□□□□□ -0.79
CTNNA1-236ENST00000522792 H7C2G1 150 aa10.14□□□□□ -0.79
CTNNA1-236ENST00000522792 SYCNQ0VAF6 134 aa10.14□□□□□ -0.79
CTNNA1-236ENST00000522792 SND1-IT1Q9HBX3 110 aa10.14□□□□□ -0.79
CTNNA1-236ENST00000522792 DNAH10Q8IVF4 4471 aa10.14□□□□□ -0.79
CTNNA1-236ENST00000522792 TRBV30A0A0K0K1B3 111 aa10.13□□□□□ -0.79
CTNNA1-236ENST00000522792 K7EP34 96 aa10.13□□□□□ -0.79
CTNNA1-236ENST00000522792 TSPAN13O95857 204 aa10.13□□□□□ -0.79
CTNNA1-236ENST00000522792 LY6G6CO95867 125 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms