RNA–Protein interactions for RNA: ENST00000522348.1

SPARC-205, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-205ENST00000522348 CFC1BP0CG36 223 aa6.55□□□□□ -1.36
SPARC-205ENST00000522348 CFC1P0CG37 223 aa6.55□□□□□ -1.36
SPARC-205ENST00000522348 CKS1BP61024 79 aa6.55□□□□□ -1.36
SPARC-205ENST00000522348 LINC00588Q9Y4M8 146 aa6.55□□□□□ -1.36
SPARC-205ENST00000522348 K7ERJ3 54 aa6.54□□□□□ -1.36
SPARC-205ENST00000522348 FABP2P12104 132 aa6.54□□□□□ -1.36
SPARC-205ENST00000522348 UBE2V1Q13404 147 aa6.54□□□□□ -1.36
SPARC-205ENST00000522348 KIAA0087Q14695 138 aa6.54□□□□□ -1.36
SPARC-205ENST00000522348 LINC00308Q8TCZ7 52 aa6.54□□□□□ -1.36
SPARC-205ENST00000522348 PRO1854Q9UHT4 67 aa6.54□□□□□ -1.36
SPARC-205ENST00000522348 A0A0B4J2C4 111 aa6.53□□□□□ -1.36
SPARC-205ENST00000522348 A0A1W2PPM0 123 aa6.53□□□□□ -1.36
SPARC-205ENST00000522348 LINC00158P58513 81 aa6.53□□□□□ -1.36
SPARC-205ENST00000522348 UPK3BQ9BT76 320 aa6.53□□□□□ -1.36
SPARC-205ENST00000522348 A0A0U1RRA0 63 aa6.52□□□□□ -1.37
SPARC-205ENST00000522348 GAGE10A6NGK3 116 aa6.52□□□□□ -1.37
SPARC-205ENST00000522348 COX17Q14061 63 aa6.52□□□□□ -1.37
SPARC-205ENST00000522348 GTF2H5Q6ZYL4 71 aa6.52□□□□□ -1.37
SPARC-205ENST00000522348 C1orf43Q9BWL3 253 aa6.52□□□□□ -1.37
SPARC-205ENST00000522348 ERG28Q9UKR5 140 aa6.52□□□□□ -1.37
SPARC-205ENST00000522348 TENM3Q9P273 2699 aa6.51□□□□□ -1.37
SPARC-205ENST00000522348 KRTAP26-1Q6PEX3 210 aa6.51□□□□□ -1.37
SPARC-205ENST00000522348 DAND5Q8N907 189 aa6.51□□□□□ -1.37
SPARC-205ENST00000522348 PGPEP1Q9NXJ5 209 aa6.51□□□□□ -1.37
SPARC-205ENST00000522348 APLNQ9ULZ1 77 aa6.51□□□□□ -1.37
SPARC-205ENST00000522348 NUPR2A6NF83 97 aa6.5□□□□□ -1.37
SPARC-205ENST00000522348 F8WDY8 70 aa6.5□□□□□ -1.37
SPARC-205ENST00000522348 NPC2P61916 151 aa6.5□□□□□ -1.37
SPARC-205ENST00000522348 SPAG11BQ08648 103 aa6.5□□□□□ -1.37
SPARC-205ENST00000522348 MIR7-3HGQ8N6C7 128 aa6.5□□□□□ -1.37
SPARC-205ENST00000522348 MUC7Q8TAX7 377 aa6.5□□□□□ -1.37
SPARC-205ENST00000522348 RMI2Q96E14 147 aa6.5□□□□□ -1.37
SPARC-205ENST00000522348 IGKV2D-24A0A075B6R9 120 aa6.49□□□□□ -1.37
SPARC-205ENST00000522348 ZNF561-AS1K7EIQ3 104 aa6.49□□□□□ -1.37
SPARC-205ENST00000522348 TSPAN13O95857 204 aa6.49□□□□□ -1.37
SPARC-205ENST00000522348 PFN2P35080 140 aa6.49□□□□□ -1.37
SPARC-205ENST00000522348 LYRM7Q5U5X0 104 aa6.49□□□□□ -1.37
SPARC-205ENST00000522348 C2orf82Q6UX34 121 aa6.49□□□□□ -1.37
SPARC-205ENST00000522348 NAA38Q9BRA0 125 aaKnown RBP6.49□□□□□ -1.37
SPARC-205ENST00000522348 SPCS1Q9Y6A9 102 aa6.49□□□□□ -1.37
SPARC-205ENST00000522348 HUWE1Q7Z6Z7 4374 aaKnown RBP6.48□□□□□ -1.37
SPARC-205ENST00000522348 K7EP34 96 aa6.48□□□□□ -1.37
SPARC-205ENST00000522348 NTN5Q8WTR8 489 aaPredicted RBP6.48□□□□□ -1.37
SPARC-205ENST00000522348 C2orf48Q96LS8 159 aa6.48□□□□□ -1.37
SPARC-205ENST00000522348 GVQW2A0A096LPI5 108 aaPredicted RBP6.47□□□□□ -1.37
SPARC-205ENST00000522348 LOC107984156A0A0G2JMH3 177 aa6.47□□□□□ -1.37
SPARC-205ENST00000522348 EIF4EBP3O60516 100 aaPredicted RBP6.47□□□□□ -1.37
SPARC-205ENST00000522348 SCGB1C2P0DMR2 95 aa6.47□□□□□ -1.37
SPARC-205ENST00000522348 UNQ6190/PRO20217Q6UXQ8 127 aa6.47□□□□□ -1.37
SPARC-205ENST00000522348 SOSTDC1Q6X4U4 206 aa6.47□□□□□ -1.37
SPARC-205ENST00000522348 ARL17AQ8IVW1 177 aa6.47□□□□□ -1.37
SPARC-205ENST00000522348 UBE2DNLQ8IWF7 75 aa6.47□□□□□ -1.37
SPARC-205ENST00000522348 MEGF8Q7Z7M0 2845 aa6.46□□□□□ -1.37
SPARC-205ENST00000522348 TRAV13-2A0A0B4J235 113 aa6.46□□□□□ -1.38
SPARC-205ENST00000522348 PSMB2P49721 201 aa6.46□□□□□ -1.38
SPARC-205ENST00000522348 Q1RN00 199 aa6.46□□□□□ -1.38
SPARC-205ENST00000522348 C6orf223Q8N319 242 aa6.46□□□□□ -1.38
SPARC-205ENST00000522348 WWC2-AS2Q96NR7 200 aa6.46□□□□□ -1.38
SPARC-205ENST00000522348 SND1-IT1Q9HBX3 110 aa6.46□□□□□ -1.38
SPARC-205ENST00000522348 TRBV20-1A0A075B6N2 111 aa6.45□□□□□ -1.38
SPARC-205ENST00000522348 TRBV30A0A0K0K1B3 111 aa6.45□□□□□ -1.38
SPARC-205ENST00000522348 COX6CP09669 75 aa6.45□□□□□ -1.38
SPARC-205ENST00000522348 Q9HAA7 133 aa6.45□□□□□ -1.38
SPARC-205ENST00000522348 H7C2G1 150 aa6.44□□□□□ -1.38
SPARC-205ENST00000522348 C10orf25Q5T742 122 aa6.44□□□□□ -1.38
SPARC-205ENST00000522348 C15orf56Q8N910 161 aa6.44□□□□□ -1.38
SPARC-205ENST00000522348 CAMK2N2Q96S95 79 aa6.44□□□□□ -1.38
SPARC-205ENST00000522348 DNAH9Q9NYC9 4486 aa6.44□□□□□ -1.38
SPARC-205ENST00000522348 NDUFC2O95298 119 aa6.43□□□□□ -1.38
SPARC-205ENST00000522348 RPL13AP40429 203 aaKnown RBP6.43□□□□□ -1.38
SPARC-205ENST00000522348 C9orf116Q5BN46 136 aaPredicted RBP6.43□□□□□ -1.38
SPARC-205ENST00000522348 LINC00526Q96FQ7 95 aa6.43□□□□□ -1.38
SPARC-205ENST00000522348 HIGD2BQ4VC39 106 aa6.42□□□□□ -1.38
SPARC-205ENST00000522348 C6orf48Q9UBA6 75 aa6.42□□□□□ -1.38
SPARC-205ENST00000522348 F8W1H4 67 aa6.41□□□□□ -1.38
SPARC-205ENST00000522348 SYCNQ0VAF6 134 aa6.41□□□□□ -1.38
SPARC-205ENST00000522348 RNF151Q2KHN1 245 aa6.41□□□□□ -1.38
SPARC-205ENST00000522348 IGKV2-28A0A075B6P5 120 aa6.4□□□□□ -1.38
SPARC-205ENST00000522348 H3BMG7 143 aa6.4□□□□□ -1.38
SPARC-205ENST00000522348 TRIAP1O43715 76 aa6.4□□□□□ -1.38
SPARC-205ENST00000522348 IGKV2D-28P01615 120 aa6.4□□□□□ -1.38
SPARC-205ENST00000522348 TTC32Q5I0X7 151 aa6.4□□□□□ -1.38
SPARC-205ENST00000522348 USP17L23D6RBM5 183 aa6.39□□□□□ -1.39
SPARC-205ENST00000522348 TCL1BO95988 128 aa6.39□□□□□ -1.39
SPARC-205ENST00000522348 RPL28P46779 137 aaKnown RBP6.39□□□□□ -1.39
SPARC-205ENST00000522348 ATXN8Q156A1 80 aa6.39□□□□□ -1.39
SPARC-205ENST00000522348 Q6ZRU5 148 aa6.39□□□□□ -1.39
SPARC-205ENST00000522348 LINC00337Q8N6G1 96 aa6.39□□□□□ -1.39
SPARC-205ENST00000522348 NDUFC2-KCTD14E9PQ53 114 aa6.38□□□□□ -1.39
SPARC-205ENST00000522348 C3orf84H3BNL1 204 aa6.38□□□□□ -1.39
SPARC-205ENST00000522348 OR13C6PQ8NH95 151 aa6.38□□□□□ -1.39
SPARC-205ENST00000522348 NBDYA0A0U1RRE5 68 aa6.37□□□□□ -1.39
SPARC-205ENST00000522348 H0YGX0 51 aa6.37□□□□□ -1.39
SPARC-205ENST00000522348 PSCAO43653 123 aa6.37□□□□□ -1.39
SPARC-205ENST00000522348 TMEM126AQ9H061 195 aa6.37□□□□□ -1.39
SPARC-205ENST00000522348 COL7A1Q02388 2944 aa6.37□□□□□ -1.39
SPARC-205ENST00000522348 TRBV10-2A0A0K0K1G8 114 aa6.36□□□□□ -1.39
SPARC-205ENST00000522348 TLX1NBP0CAT3 122 aa6.36□□□□□ -1.39
SPARC-205ENST00000522348 C14orf177Q52M58 125 aa6.36□□□□□ -1.39
SPARC-205ENST00000522348 CASC10Q5T4H9 136 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms