RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 PPDPFQ9H3Y8 114 aa10.09□□□□□ -0.79
TRAPPC9-205ENST00000518839 COX11Q9Y6N1 276 aa10.09□□□□□ -0.79
TRAPPC9-205ENST00000518839 NHP2Q9NX24 153 aaKnown RBP10.08□□□□□ -0.8
TRAPPC9-205ENST00000518839 COL7A1Q02388 2944 aa10.08□□□□□ -0.8
TRAPPC9-205ENST00000518839 DNHD1Q96M86 4753 aa10.07□□□□□ -0.8
TRAPPC9-205ENST00000518839 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC9-205ENST00000518839 A0A1B0GWB2 263 aa10.07□□□□□ -0.8
TRAPPC9-205ENST00000518839 F8WDY8 70 aa10.07□□□□□ -0.8
TRAPPC9-205ENST00000518839 ADAMTSL4-AS1Q5T5F5 129 aa10.07□□□□□ -0.8
TRAPPC9-205ENST00000518839 MUSTN1Q8IVN3 82 aa10.07□□□□□ -0.8
TRAPPC9-205ENST00000518839 Q9HAA7 133 aa10.07□□□□□ -0.8
TRAPPC9-205ENST00000518839 ERG28Q9UKR5 140 aa10.06□□□□□ -0.8
TRAPPC9-205ENST00000518839 ZNF561-AS1K7EIQ3 104 aa10.05□□□□□ -0.8
TRAPPC9-205ENST00000518839 TAX1BP3O14907 124 aa10.05□□□□□ -0.8
TRAPPC9-205ENST00000518839 COX17Q14061 63 aa10.05□□□□□ -0.8
TRAPPC9-205ENST00000518839 TTC32Q5I0X7 151 aa10.05□□□□□ -0.8
TRAPPC9-205ENST00000518839 MUC7Q8TAX7 377 aa10.05□□□□□ -0.8
TRAPPC9-205ENST00000518839 LINC00158P58513 81 aa10.04□□□□□ -0.8
TRAPPC9-205ENST00000518839 A4D1N5 150 aa10.03□□□□□ -0.8
TRAPPC9-205ENST00000518839 C2orf82Q6UX34 121 aa10.03□□□□□ -0.8
TRAPPC9-205ENST00000518839 LINC00308Q8TCZ7 52 aa10.03□□□□□ -0.8
TRAPPC9-205ENST00000518839 NTN5Q8WTR8 489 aaPredicted RBP10.03□□□□□ -0.8
TRAPPC9-205ENST00000518839 C2orf48Q96LS8 159 aa10.03□□□□□ -0.8
TRAPPC9-205ENST00000518839 WWC2-AS2Q96NR7 200 aa10.03□□□□□ -0.8
TRAPPC9-205ENST00000518839 GVQW2A0A096LPI5 108 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC9-205ENST00000518839 A0A0B4J2C4 111 aa10.02□□□□□ -0.81
TRAPPC9-205ENST00000518839 A0A0U1RRA0 63 aa10.02□□□□□ -0.81
TRAPPC9-205ENST00000518839 MEGF8Q7Z7M0 2845 aa10.02□□□□□ -0.81
TRAPPC9-205ENST00000518839 A0A1B0GV90 55 aa10.01□□□□□ -0.81
TRAPPC9-205ENST00000518839 C9orf118A6NHY6 69 aa10.01□□□□□ -0.81
TRAPPC9-205ENST00000518839 MIR7-3HGQ8N6C7 128 aa10.01□□□□□ -0.81
TRAPPC9-205ENST00000518839 DAND5Q8N907 189 aa10.01□□□□□ -0.81
TRAPPC9-205ENST00000518839 C15orf56Q8N910 161 aa10.01□□□□□ -0.81
TRAPPC9-205ENST00000518839 TRBV30A0A0K0K1B3 111 aa10□□□□□ -0.81
TRAPPC9-205ENST00000518839 CFC1BP0CG36 223 aa10□□□□□ -0.81
TRAPPC9-205ENST00000518839 CFC1P0CG37 223 aa10□□□□□ -0.81
TRAPPC9-205ENST00000518839 PFN2P35080 140 aa10□□□□□ -0.81
TRAPPC9-205ENST00000518839 RAB37Q96AX2 223 aa10□□□□□ -0.81
TRAPPC9-205ENST00000518839 CAMK2N2Q96S95 79 aa10□□□□□ -0.81
TRAPPC9-205ENST00000518839 K7ERJ3 54 aa9.99□□□□□ -0.81
TRAPPC9-205ENST00000518839 NPC2P61916 151 aa9.99□□□□□ -0.81
TRAPPC9-205ENST00000518839 HIGD2BQ4VC39 106 aa9.99□□□□□ -0.81
TRAPPC9-205ENST00000518839 C6orf223Q8N319 242 aa9.99□□□□□ -0.81
TRAPPC9-205ENST00000518839 PRKDCP78527 4128 aaKnown RBP9.99□□□□□ -0.81
TRAPPC9-205ENST00000518839 NBDYA0A0U1RRE5 68 aa9.98□□□□□ -0.81
TRAPPC9-205ENST00000518839 UNQ6190/PRO20217Q6UXQ8 127 aa9.98□□□□□ -0.81
TRAPPC9-205ENST00000518839 PRO1854Q9UHT4 67 aa9.98□□□□□ -0.81
TRAPPC9-205ENST00000518839 SOSTDC1Q6X4U4 206 aa9.97□□□□□ -0.81
TRAPPC9-205ENST00000518839 DYNC2H1Q8NCM8 4307 aaKnown RBP9.97□□□□□ -0.81
TRAPPC9-205ENST00000518839 LOC107984156A0A0G2JMH3 177 aa9.96□□□□□ -0.82
TRAPPC9-205ENST00000518839 ARL17AQ8IVW1 177 aa9.96□□□□□ -0.82
TRAPPC9-205ENST00000518839 LINC00526Q96FQ7 95 aa9.96□□□□□ -0.82
TRAPPC9-205ENST00000518839 KRTAP1-5Q9BYS1 174 aa9.96□□□□□ -0.82
TRAPPC9-205ENST00000518839 USP17L23D6RBM5 183 aa9.95□□□□□ -0.82
TRAPPC9-205ENST00000518839 H3BUT2 72 aa9.95□□□□□ -0.82
TRAPPC9-205ENST00000518839 C10orf25Q5T742 122 aa9.95□□□□□ -0.82
TRAPPC9-205ENST00000518839 PGPEP1Q9NXJ5 209 aa9.95□□□□□ -0.82
TRAPPC9-205ENST00000518839 C6orf48Q9UBA6 75 aa9.95□□□□□ -0.82
TRAPPC9-205ENST00000518839 PSCAO43653 123 aa9.94□□□□□ -0.82
TRAPPC9-205ENST00000518839 SYCNQ0VAF6 134 aa9.94□□□□□ -0.82
TRAPPC9-205ENST00000518839 SND1-IT1Q9HBX3 110 aa9.94□□□□□ -0.82
TRAPPC9-205ENST00000518839 C3orf84H3BNL1 204 aa9.93□□□□□ -0.82
TRAPPC9-205ENST00000518839 EIF4EBP3O60516 100 aaPredicted RBP9.93□□□□□ -0.82
TRAPPC9-205ENST00000518839 RNF151Q2KHN1 245 aa9.93□□□□□ -0.82
TRAPPC9-205ENST00000518839 C14orf177Q52M58 125 aa9.93□□□□□ -0.82
TRAPPC9-205ENST00000518839 LYRM7Q5U5X0 104 aa9.93□□□□□ -0.82
TRAPPC9-205ENST00000518839 A0A1W2PPM0 123 aa9.92□□□□□ -0.82
TRAPPC9-205ENST00000518839 FABP2P12104 132 aa9.92□□□□□ -0.82
TRAPPC9-205ENST00000518839 VAMP3Q15836 100 aa9.92□□□□□ -0.82
TRAPPC9-205ENST00000518839 C9orf116Q5BN46 136 aaPredicted RBP9.92□□□□□ -0.82
TRAPPC9-205ENST00000518839 Q6ZRU5 148 aa9.92□□□□□ -0.82
TRAPPC9-205ENST00000518839 TRAV13-2A0A0B4J235 113 aa9.91□□□□□ -0.82
TRAPPC9-205ENST00000518839 NDUFC2O95298 119 aa9.91□□□□□ -0.82
TRAPPC9-205ENST00000518839 TSPAN13O95857 204 aa9.91□□□□□ -0.82
TRAPPC9-205ENST00000518839 CASC10Q5T4H9 136 aa9.91□□□□□ -0.82
TRAPPC9-205ENST00000518839 CARD19Q96LW7 228 aa9.91□□□□□ -0.82
TRAPPC9-205ENST00000518839 Q1RN00 199 aa9.9□□□□□ -0.82
TRAPPC9-205ENST00000518839 GTF2H5Q6ZYL4 71 aa9.89□□□□□ -0.83
TRAPPC9-205ENST00000518839 NAA38Q9BRA0 125 aaKnown RBP9.89□□□□□ -0.83
TRAPPC9-205ENST00000518839 FBN3Q75N90 2809 aa9.89□□□□□ -0.83
TRAPPC9-205ENST00000518839 NDUFC2-KCTD14E9PQ53 114 aa9.88□□□□□ -0.83
TRAPPC9-205ENST00000518839 RPL13AP40429 203 aaKnown RBP9.88□□□□□ -0.83
TRAPPC9-205ENST00000518839 TLX1NBP0CAT3 122 aa9.87□□□□□ -0.83
TRAPPC9-205ENST00000518839 GAGE10A6NGK3 116 aa9.86□□□□□ -0.83
TRAPPC9-205ENST00000518839 H7C2G1 150 aa9.86□□□□□ -0.83
TRAPPC9-205ENST00000518839 PSMB2P49721 201 aa9.86□□□□□ -0.83
TRAPPC9-205ENST00000518839 SPCS1Q9Y6A9 102 aa9.86□□□□□ -0.83
TRAPPC9-205ENST00000518839 DNAH7Q8WXX0 4024 aa9.85□□□□□ -0.83
TRAPPC9-205ENST00000518839 IGKV2-28A0A075B6P5 120 aa9.85□□□□□ -0.83
TRAPPC9-205ENST00000518839 K7EP34 96 aa9.85□□□□□ -0.83
TRAPPC9-205ENST00000518839 IGKV2D-28P01615 120 aa9.85□□□□□ -0.83
TRAPPC9-205ENST00000518839 COX6CP09669 75 aa9.85□□□□□ -0.83
TRAPPC9-205ENST00000518839 UBE2V1Q13404 147 aa9.85□□□□□ -0.83
TRAPPC9-205ENST00000518839 Q6ZR54 194 aa9.85□□□□□ -0.83
TRAPPC9-205ENST00000518839 LECT2O14960 151 aa9.84□□□□□ -0.83
TRAPPC9-205ENST00000518839 LINC00476Q8WZB0 136 aa9.84□□□□□ -0.83
TRAPPC9-205ENST00000518839 M0R2N4 97 aa9.83□□□□□ -0.84
TRAPPC9-205ENST00000518839 LY6G6CO95867 125 aa9.83□□□□□ -0.84
TRAPPC9-205ENST00000518839 SCGB1C2P0DMR2 95 aa9.83□□□□□ -0.84
TRAPPC9-205ENST00000518839 CNBPP62633 177 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms