RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 KRTAP13-1Q8IUC0 172 aa2.36□□□□□ -2.03
CTNNA1-202ENST00000517533 UQCR10Q9UDW1 63 aa2.36□□□□□ -2.03
CTNNA1-202ENST00000517533 CHD7Q9P2D1 2997 aa2.36□□□□□ -2.03
CTNNA1-202ENST00000517533 MED12Q93074 2177 aa2.36□□□□□ -2.03
CTNNA1-202ENST00000517533 C10orf142B7Z368 130 aa2.35□□□□□ -2.03
CTNNA1-202ENST00000517533 H7BZZ5 65 aa2.35□□□□□ -2.03
CTNNA1-202ENST00000517533 CCL22O00626 93 aa2.35□□□□□ -2.03
CTNNA1-202ENST00000517533 CAV3P56539 151 aa2.35□□□□□ -2.03
CTNNA1-202ENST00000517533 KLKP1Q107X0 134 aa2.35□□□□□ -2.03
CTNNA1-202ENST00000517533 DEFB123Q8N688 67 aa2.35□□□□□ -2.03
CTNNA1-202ENST00000517533 RANBP2P49792 3224 aaKnown RBP2.35□□□□□ -2.03
CTNNA1-202ENST00000517533 PDE4DIPQ5VU43 2346 aa2.35□□□□□ -2.03
CTNNA1-202ENST00000517533 EFNA4P52798 201 aa2.34□□□□□ -2.03
CTNNA1-202ENST00000517533 CCL18P55774 89 aa2.34□□□□□ -2.03
CTNNA1-202ENST00000517533 LCE1CQ5T751 118 aa2.34□□□□□ -2.03
CTNNA1-202ENST00000517533 LCE1BQ5T7P3 118 aa2.34□□□□□ -2.03
CTNNA1-202ENST00000517533 NXT2Q9NPJ8 142 aaKnown RBP2.34□□□□□ -2.03
CTNNA1-202ENST00000517533 V9GYH0 126 aa2.34□□□□□ -2.03
CTNNA1-202ENST00000517533 PRRC2BQ5JSZ5 2229 aaKnown RBP2.34□□□□□ -2.04
CTNNA1-202ENST00000517533 TNRC18O15417 2968 aaPredicted RBP2.33□□□□□ -2.04
CTNNA1-202ENST00000517533 LOC730098B7Z3J9 87 aa2.33□□□□□ -2.04
CTNNA1-202ENST00000517533 VMO1Q7Z5L0 202 aa2.33□□□□□ -2.04
CTNNA1-202ENST00000517533 PPP1R1CQ8WVI7 109 aa2.33□□□□□ -2.04
CTNNA1-202ENST00000517533 S100A16Q96FQ6 103 aaKnown RBP2.33□□□□□ -2.04
CTNNA1-202ENST00000517533 COX14Q96I36 57 aa2.33□□□□□ -2.04
CTNNA1-202ENST00000517533 Q96NJ1 140 aa2.33□□□□□ -2.04
CTNNA1-202ENST00000517533 SPTBP11277 2137 aa2.32□□□□□ -2.04
CTNNA1-202ENST00000517533 COX6CP09669 75 aa2.32□□□□□ -2.04
CTNNA1-202ENST00000517533 ANKRD36A6QL64 1941 aa2.32□□□□□ -2.04
CTNNA1-202ENST00000517533 BPTFQ12830 3046 aa2.32□□□□□ -2.04
CTNNA1-202ENST00000517533 LAMA3Q16787 3333 aa2.32□□□□□ -2.04
CTNNA1-202ENST00000517533 SDK1Q7Z5N4 2213 aa2.32□□□□□ -2.04
CTNNA1-202ENST00000517533 TRIOBPQ9H2D6 2365 aa2.31□□□□□ -2.04
CTNNA1-202ENST00000517533 SPTY2D1-AS1A0A0U1RR47 76 aa2.31□□□□□ -2.04
CTNNA1-202ENST00000517533 RPS27LQ71UM5 84 aaKnown RBP2.31□□□□□ -2.04
CTNNA1-202ENST00000517533 WFDC6Q9BQY6 131 aa2.31□□□□□ -2.04
CTNNA1-202ENST00000517533 TMEM14BQ9NUH8 114 aa2.31□□□□□ -2.04
CTNNA1-202ENST00000517533 HIGD1BQ9P298 99 aa2.31□□□□□ -2.04
CTNNA1-202ENST00000517533 C5orf42Q9H799 3197 aa2.31□□□□□ -2.04
CTNNA1-202ENST00000517533 HIVEP2P31629 2446 aa2.31□□□□□ -2.04
CTNNA1-202ENST00000517533 F5P12259 2224 aa2.3□□□□□ -2.04
CTNNA1-202ENST00000517533 REV3LO60673 3130 aa2.3□□□□□ -2.04
CTNNA1-202ENST00000517533 XIRP2A4UGR9 3374 aa2.3□□□□□ -2.04
CTNNA1-202ENST00000517533 CDH23Q9H251 3354 aa2.3□□□□□ -2.04
CTNNA1-202ENST00000517533 TMEM14DPA8MWL7 114 aa2.3□□□□□ -2.04
CTNNA1-202ENST00000517533 FAM223AQ8IWN6 122 aa2.3□□□□□ -2.04
CTNNA1-202ENST00000517533 R4GMQ9 66 aa2.3□□□□□ -2.04
CTNNA1-202ENST00000517533 TRGV1A0A0A0MS02 117 aa2.29□□□□□ -2.04
CTNNA1-202ENST00000517533 TRBV30A0A0K0K1B3 111 aa2.29□□□□□ -2.04
CTNNA1-202ENST00000517533 IGLC7A0M8Q6 106 aa2.29□□□□□ -2.04
CTNNA1-202ENST00000517533 NCR3O14931 201 aa2.29□□□□□ -2.04
CTNNA1-202ENST00000517533 S100A3P33764 101 aa2.29□□□□□ -2.04
CTNNA1-202ENST00000517533 RPL38P63173 70 aaKnown RBP2.29□□□□□ -2.04
CTNNA1-202ENST00000517533 DEFB107AQ8IZN7 70 aa2.29□□□□□ -2.04
CTNNA1-202ENST00000517533 DEFB119Q8N690 84 aa2.29□□□□□ -2.04
CTNNA1-202ENST00000517533 SZT2Q5T011 3432 aa2.29□□□□□ -2.04
CTNNA1-202ENST00000517533 M0R135 149 aa2.28□□□□□ -2.04
CTNNA1-202ENST00000517533 TMEM170BQ5T4T1 132 aa2.28□□□□□ -2.04
CTNNA1-202ENST00000517533 ARL2-SNX15V9GYD0 113 aa2.28□□□□□ -2.04
CTNNA1-202ENST00000517533 DOCK11Q5JSL3 2073 aa2.28□□□□□ -2.04
CTNNA1-202ENST00000517533 UNC80Q8N2C7 3258 aa2.27□□□□□ -2.05
CTNNA1-202ENST00000517533 DEFB133Q30KQ1 61 aa2.27□□□□□ -2.05
CTNNA1-202ENST00000517533 C6orf52Q5T4I8 152 aa2.27□□□□□ -2.05
CTNNA1-202ENST00000517533 CACNA1BQ00975 2339 aa2.26□□□□□ -2.05
CTNNA1-202ENST00000517533 TRIOO75962 3097 aa2.26□□□□□ -2.05
CTNNA1-202ENST00000517533 PRUNE2Q8WUY3 3088 aa2.26□□□□□ -2.05
CTNNA1-202ENST00000517533 TRBV25-1A0A075B6N4 114 aa2.26□□□□□ -2.05
CTNNA1-202ENST00000517533 TRAV1-2A0A0B4J238 106 aa2.26□□□□□ -2.05
CTNNA1-202ENST00000517533 F8VRH5 84 aa2.26□□□□□ -2.05
CTNNA1-202ENST00000517533 H0YGG7 62 aa2.26□□□□□ -2.05
CTNNA1-202ENST00000517533 ALKAL2Q6UX46 152 aa2.26□□□□□ -2.05
CTNNA1-202ENST00000517533 AMELXQ99217 191 aa2.26□□□□□ -2.05
CTNNA1-202ENST00000517533 SPTBN5Q9NRC6 3674 aaKnown RBP2.26□□□□□ -2.05
CTNNA1-202ENST00000517533 BDP1A6H8Y1 2624 aa2.25□□□□□ -2.05
CTNNA1-202ENST00000517533 EYSQ5T1H1 3165 aa2.25□□□□□ -2.05
CTNNA1-202ENST00000517533 KRTAP12-3P60328 96 aa2.25□□□□□ -2.05
CTNNA1-202ENST00000517533 C10orf99Q6UWK7 81 aa2.25□□□□□ -2.05
CTNNA1-202ENST00000517533 BAGE3Q86Y29 109 aa2.25□□□□□ -2.05
CTNNA1-202ENST00000517533 CTXND1A0A1B0GTU2 59 aa2.24□□□□□ -2.05
CTNNA1-202ENST00000517533 SMIM31A0A1B0GVY4 71 aa2.24□□□□□ -2.05
CTNNA1-202ENST00000517533 FAM223BA6NKX1 122 aa2.24□□□□□ -2.05
CTNNA1-202ENST00000517533 STATHP02808 62 aa2.24□□□□□ -2.05
CTNNA1-202ENST00000517533 IFI6P09912 130 aa2.24□□□□□ -2.05
CTNNA1-202ENST00000517533 ACYP2P14621 99 aa2.24□□□□□ -2.05
CTNNA1-202ENST00000517533 ETDBQ3ZM63 59 aa2.24□□□□□ -2.05
CTNNA1-202ENST00000517533 S100A13Q99584 98 aa2.24□□□□□ -2.05
CTNNA1-202ENST00000517533 LINC01558Q9Y6Z2 57 aa2.24□□□□□ -2.05
CTNNA1-202ENST00000517533 PI4KAP42356 2102 aa2.24□□□□□ -2.05
CTNNA1-202ENST00000517533 KNL1Q8NG31 2342 aa2.23□□□□□ -2.05
CTNNA1-202ENST00000517533 LY6G6CO95867 125 aa2.23□□□□□ -2.05
CTNNA1-202ENST00000517533 HMGN2P05204 90 aaKnown RBP2.23□□□□□ -2.05
CTNNA1-202ENST00000517533 ZNF137PP52743 207 aa2.23□□□□□ -2.05
CTNNA1-202ENST00000517533 SMIM11AP58511 58 aa2.23□□□□□ -2.05
CTNNA1-202ENST00000517533 PMCHL1Q16048 86 aa2.23□□□□□ -2.05
CTNNA1-202ENST00000517533 DEFB110Q30KQ9 67 aa2.23□□□□□ -2.05
CTNNA1-202ENST00000517533 LINC00575Q6W349 94 aa2.23□□□□□ -2.05
CTNNA1-202ENST00000517533 SPCS1Q9Y6A9 102 aa2.23□□□□□ -2.05
CTNNA1-202ENST00000517533 COL6A3P12111 3177 aa2.23□□□□□ -2.05
CTNNA1-202ENST00000517533 NCOR1O75376 2440 aa2.22□□□□□ -2.05
CTNNA1-202ENST00000517533 TECTAO75443 2155 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms