RNA–Protein interactions for RNA: ENST00000517276.1

SCARNA11.3-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 130 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.3-201ENST00000517276 LINC00959A0A1B0GUT2 108 aa0.86□□□□□ -2.27
SCARNA11.3-201ENST00000517276 A0A1B0GUT8 65 aa0.86□□□□□ -2.27
SCARNA11.3-201ENST00000517276 S100A3P33764 101 aa0.86□□□□□ -2.27
SCARNA11.3-201ENST00000517276 HELZ2Q9BYK8 2649 aaKnown RBP0.86□□□□□ -2.27
SCARNA11.3-201ENST00000517276 PLXNB2O15031 1838 aa0.86□□□□□ -2.27
SCARNA11.3-201ENST00000517276 ABCA8O94911 1581 aa0.86□□□□□ -2.27
SCARNA11.3-201ENST00000517276 CFAP74Q9C0B2 1584 aa0.86□□□□□ -2.27
SCARNA11.3-201ENST00000517276 LAMC1P11047 1609 aa0.86□□□□□ -2.27
SCARNA11.3-201ENST00000517276 TARBP1Q13395 1621 aaKnown RBP0.86□□□□□ -2.27
SCARNA11.3-201ENST00000517276 IQGAP3Q86VI3 1631 aa0.86□□□□□ -2.27
SCARNA11.3-201ENST00000517276 GOLGA4Q13439 2230 aaKnown RBP0.85□□□□□ -2.27
SCARNA11.3-201ENST00000517276 ABCC1P33527 1531 aa0.85□□□□□ -2.27
SCARNA11.3-201ENST00000517276 C5P01031 1676 aa0.85□□□□□ -2.27
SCARNA11.3-201ENST00000517276 AHCTF1Q8WYP5 2266 aa0.85□□□□□ -2.27
SCARNA11.3-201ENST00000517276 TRBV7-4A0A0J9YYF1 115 aa0.85□□□□□ -2.27
SCARNA11.3-201ENST00000517276 SMIM31A0A1B0GVY4 71 aa0.85□□□□□ -2.27
SCARNA11.3-201ENST00000517276 ANKRD17O75179 2603 aaKnown RBP0.85□□□□□ -2.27
SCARNA11.3-201ENST00000517276 CLIP1P30622 1438 aa0.85□□□□□ -2.27
SCARNA11.3-201ENST00000517276 DEFB112Q30KQ8 113 aa0.85□□□□□ -2.27
SCARNA11.3-201ENST00000517276 ATP7BP35670 1465 aa0.85□□□□□ -2.27
SCARNA11.3-201ENST00000517276 NCOA2Q15596 1464 aa0.85□□□□□ -2.27
SCARNA11.3-201ENST00000517276 MUC6Q6W4X9 2439 aa0.85□□□□□ -2.27
SCARNA11.3-201ENST00000517276 SHPRHQ149N8 1683 aa0.84□□□□□ -2.27
SCARNA11.3-201ENST00000517276 PPRC1Q5VV67 1664 aaKnown RBP0.84□□□□□ -2.27
SCARNA11.3-201ENST00000517276 ADAMTS12P58397 1594 aa0.84□□□□□ -2.27
SCARNA11.3-201ENST00000517276 A0A087WXM4 84 aa0.84□□□□□ -2.27
SCARNA11.3-201ENST00000517276 TRAV21A0A0B4J279 112 aa0.84□□□□□ -2.27
SCARNA11.3-201ENST00000517276 FAM103A1Q9BTL3 118 aaKnown RBP0.84□□□□□ -2.27
SCARNA11.3-201ENST00000517276 ASH1LQ9NR48 2969 aaKnown RBP0.84□□□□□ -2.27
SCARNA11.3-201ENST00000517276 CCDC141Q6ZP82 1450 aa0.84□□□□□ -2.28
SCARNA11.3-201ENST00000517276 ZNF462Q96JM2 2506 aa0.84□□□□□ -2.28
SCARNA11.3-201ENST00000517276 SLIT1O75093 1534 aa0.84□□□□□ -2.28
SCARNA11.3-201ENST00000517276 XRN1Q8IZH2 1706 aaKnown RBP0.84□□□□□ -2.28
SCARNA11.3-201ENST00000517276 MYO5CQ9NQX4 1742 aa0.84□□□□□ -2.28
SCARNA11.3-201ENST00000517276 SAMD9Q5K651 1589 aa0.83□□□□□ -2.28
SCARNA11.3-201ENST00000517276 UMAD1C9J7I0 102 aa0.83□□□□□ -2.28
SCARNA11.3-201ENST00000517276 KRTAP21-3Q3LHN1 58 aa0.83□□□□□ -2.28
SCARNA11.3-201ENST00000517276 HEPN1Q6WQI6 88 aa0.83□□□□□ -2.28
SCARNA11.3-201ENST00000517276 CRIPTQ9P021 101 aa0.83□□□□□ -2.28
SCARNA11.3-201ENST00000517276 ZNF831Q5JPB2 1677 aa0.83□□□□□ -2.28
SCARNA11.3-201ENST00000517276 ANKRD36A6QL64 1941 aa0.83□□□□□ -2.28
SCARNA11.3-201ENST00000517276 KIF20BQ96Q89 1820 aa0.82□□□□□ -2.28
SCARNA11.3-201ENST00000517276 I3L2K1 104 aa0.82□□□□□ -2.28
SCARNA11.3-201ENST00000517276 IFI6P09912 130 aa0.82□□□□□ -2.28
SCARNA11.3-201ENST00000517276 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.82□□□□□ -2.28
SCARNA11.3-201ENST00000517276 WFDC9Q8NEX5 89 aa0.82□□□□□ -2.28
SCARNA11.3-201ENST00000517276 GAFA1Q96PS6 74 aa0.82□□□□□ -2.28
SCARNA11.3-201ENST00000517276 HILPDAQ9Y5L2 63 aa0.82□□□□□ -2.28
SCARNA11.3-201ENST00000517276 LTN1O94822 1766 aa0.82□□□□□ -2.28
SCARNA11.3-201ENST00000517276 FAM208BQ5VWN6 2430 aa0.81□□□□□ -2.28
SCARNA11.3-201ENST00000517276 KMT2BQ9UMN6 2715 aaPredicted RBP0.81□□□□□ -2.28
SCARNA11.3-201ENST00000517276 NOTCH2Q04721 2471 aa0.81□□□□□ -2.28
SCARNA11.3-201ENST00000517276 RGPD1P0DJD0 1748 aa0.81□□□□□ -2.28
SCARNA11.3-201ENST00000517276 LRRC9Q6ZRR7 1453 aa0.81□□□□□ -2.28
SCARNA11.3-201ENST00000517276 LRRC7Q96NW7 1537 aa0.81□□□□□ -2.28
SCARNA11.3-201ENST00000517276 DUOX2Q9NRD8 1548 aa0.81□□□□□ -2.28
SCARNA11.3-201ENST00000517276 A0A0D9SFI3 127 aa0.81□□□□□ -2.28
SCARNA11.3-201ENST00000517276 H3BVH4 76 aa0.81□□□□□ -2.28
SCARNA11.3-201ENST00000517276 IFI27P40305 119 aaPredicted RBP0.81□□□□□ -2.28
SCARNA11.3-201ENST00000517276 TP53AIP1Q9HCN2 124 aa0.81□□□□□ -2.28
SCARNA11.3-201ENST00000517276 CEP170BQ9Y4F5 1589 aaPredicted RBP0.81□□□□□ -2.28
SCARNA11.3-201ENST00000517276 PTPN23Q9H3S7 1636 aa0.81□□□□□ -2.28
SCARNA11.3-201ENST00000517276 ALKQ9UM73 1620 aa0.81□□□□□ -2.28
SCARNA11.3-201ENST00000517276 OTOGLQ3ZCN5 2332 aa0.81□□□□□ -2.28
SCARNA11.3-201ENST00000517276 RGPD2P0DJD1 1756 aa0.8□□□□□ -2.28
SCARNA11.3-201ENST00000517276 MADDQ8WXG6 1647 aa0.8□□□□□ -2.28
SCARNA11.3-201ENST00000517276 ARL14EPLP0DKL9 152 aa0.8□□□□□ -2.28
SCARNA11.3-201ENST00000517276 LCE1CQ5T751 118 aa0.8□□□□□ -2.28
SCARNA11.3-201ENST00000517276 LCE1BQ5T7P3 118 aa0.8□□□□□ -2.28
SCARNA11.3-201ENST00000517276 ATP5EP2Q5VTU8 51 aa0.8□□□□□ -2.28
SCARNA11.3-201ENST00000517276 PRO0255Q9UI72 69 aa0.8□□□□□ -2.28
SCARNA11.3-201ENST00000517276 ZC3H13Q5T200 1668 aaKnown RBP0.8□□□□□ -2.28
SCARNA11.3-201ENST00000517276 RGPD8O14715 1765 aaPredicted RBP0.8□□□□□ -2.28
SCARNA11.3-201ENST00000517276 RGPD5Q99666 1765 aa0.8□□□□□ -2.28
SCARNA11.3-201ENST00000517276 URB1O60287 2271 aaKnown RBP0.8□□□□□ -2.28
SCARNA11.3-201ENST00000517276 URB2Q14146 1524 aaKnown RBP0.79□□□□□ -2.28
SCARNA11.3-201ENST00000517276 ERICH3Q5RHP9 1530 aa0.79□□□□□ -2.28
SCARNA11.3-201ENST00000517276 TULP4Q9NRJ4 1543 aa0.79□□□□□ -2.28
SCARNA11.3-201ENST00000517276 PIK3C2BO00750 1634 aa0.79□□□□□ -2.28
SCARNA11.3-201ENST00000517276 KIAA0556O60303 1618 aa0.79□□□□□ -2.28
SCARNA11.3-201ENST00000517276 USP32Q8NFA0 1604 aa0.79□□□□□ -2.28
SCARNA11.3-201ENST00000517276 FXYD6-FXYD2A0A087WZ82 144 aa0.79□□□□□ -2.28
SCARNA11.3-201ENST00000517276 COX6A2Q02221 97 aa0.79□□□□□ -2.28
SCARNA11.3-201ENST00000517276 PLCE1Q9P212 2302 aa0.79□□□□□ -2.28
SCARNA11.3-201ENST00000517276 A0A0G2JMZ2 1700 aa0.78□□□□□ -2.28
SCARNA11.3-201ENST00000517276 PKD1L3Q7Z443 1732 aa0.78□□□□□ -2.28
SCARNA11.3-201ENST00000517276 SCN11AQ9UI33 1791 aa0.78□□□□□ -2.28
SCARNA11.3-201ENST00000517276 ARFGEF2Q9Y6D5 1785 aa0.78□□□□□ -2.28
SCARNA11.3-201ENST00000517276 COX7BP24311 80 aa0.78□□□□□ -2.28
SCARNA11.3-201ENST00000517276 CNFNQ9BYD5 112 aa0.78□□□□□ -2.28
SCARNA11.3-201ENST00000517276 CACNA1HO95180 2353 aa0.78□□□□□ -2.28
SCARNA11.3-201ENST00000517276 NKTRP30414 1462 aaKnown RBP0.78□□□□□ -2.28
SCARNA11.3-201ENST00000517276 HMGA1P17096 107 aaKnown RBP0.77□□□□□ -2.29
SCARNA11.3-201ENST00000517276 NREPQ16612 68 aa0.77□□□□□ -2.29
SCARNA11.3-201ENST00000517276 PIGYQ3MUY2 71 aa0.77□□□□□ -2.29
SCARNA11.3-201ENST00000517276 PAPPAQ13219 1627 aa0.77□□□□□ -2.29
SCARNA11.3-201ENST00000517276 DOPEY2Q9Y3R5 2298 aa0.77□□□□□ -2.29
SCARNA11.3-201ENST00000517276 SETBP1Q9Y6X0 1596 aa0.76□□□□□ -2.29
SCARNA11.3-201ENST00000517276 MAGI3Q5TCQ9 1506 aa0.76□□□□□ -2.29
SCARNA11.3-201ENST00000517276 CD163L1Q9NR16 1453 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms