RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 TNRC6CQ9HCJ0 1690 aaKnown RBP-4.32□□□□□ -3.1
RNU6-542P-201ENST00000516405 MKI67P46013 3256 aaKnown RBP-4.33□□□□□ -3.1
RNU6-542P-201ENST00000516405 LOC100506127A0A0U1RQW1 187 aa-4.33□□□□□ -3.1
RNU6-542P-201ENST00000516405 CETN3O15182 167 aa-4.33□□□□□ -3.1
RNU6-542P-201ENST00000516405 MYOZ3Q8TDC0 251 aa-4.33□□□□□ -3.1
RNU6-542P-201ENST00000516405 AQP10Q96PS8 301 aa-4.33□□□□□ -3.1
RNU6-542P-201ENST00000516405 DYNLRB1Q9NP97 96 aa-4.33□□□□□ -3.1
RNU6-542P-201ENST00000516405 USP32Q8NFA0 1604 aa-4.33□□□□□ -3.1
RNU6-542P-201ENST00000516405 TOGARAM1Q9Y4F4 1720 aa-4.33□□□□□ -3.1
RNU6-542P-201ENST00000516405 RGPD8O14715 1765 aaPredicted RBP-4.34□□□□□ -3.1
RNU6-542P-201ENST00000516405 RGPD5Q99666 1765 aa-4.34□□□□□ -3.1
RNU6-542P-201ENST00000516405 CRYBG1Q9Y4K1 1723 aa-4.34□□□□□ -3.1
RNU6-542P-201ENST00000516405 CUX1P39880 1505 aa-4.34□□□□□ -3.1
RNU6-542P-201ENST00000516405 FAM107AO95990 144 aa-4.34□□□□□ -3.1
RNU6-542P-201ENST00000516405 HIST1H1DP16402 221 aaKnown RBP-4.34□□□□□ -3.1
RNU6-542P-201ENST00000516405 PSPHP78330 225 aa-4.34□□□□□ -3.1
RNU6-542P-201ENST00000516405 LIN52Q52LA3 116 aa-4.34□□□□□ -3.1
RNU6-542P-201ENST00000516405 TMEM78Q5T7P6 136 aa-4.34□□□□□ -3.1
RNU6-542P-201ENST00000516405 AGPAT3Q9NRZ7 376 aa-4.34□□□□□ -3.1
RNU6-542P-201ENST00000516405 FAIMQ9NVQ4 179 aa-4.34□□□□□ -3.1
RNU6-542P-201ENST00000516405 DNAH14Q0VDD8 3507 aa-4.34□□□□□ -3.1
RNU6-542P-201ENST00000516405 QSER1Q2KHR3 1735 aa-4.35□□□□□ -3.11
RNU6-542P-201ENST00000516405 MAP3K5Q99683 1374 aa-4.35□□□□□ -3.11
RNU6-542P-201ENST00000516405 LINC01546A6NGU7 62 aa-4.35□□□□□ -3.11
RNU6-542P-201ENST00000516405 MIC13Q5XKP0 118 aa-4.35□□□□□ -3.11
RNU6-542P-201ENST00000516405 COX6B2Q6YFQ2 88 aa-4.35□□□□□ -3.11
RNU6-542P-201ENST00000516405 SEC11CQ9BY50 192 aa-4.35□□□□□ -3.11
RNU6-542P-201ENST00000516405 SS18L2Q9UHA2 77 aa-4.35□□□□□ -3.11
RNU6-542P-201ENST00000516405 SPEF2Q9C093 1822 aa-4.35□□□□□ -3.11
RNU6-542P-201ENST00000516405 TARBP1Q13395 1621 aaKnown RBP-4.35□□□□□ -3.11
RNU6-542P-201ENST00000516405 IFT140Q96RY7 1462 aa-4.36□□□□□ -3.11
RNU6-542P-201ENST00000516405 C6orf201Q7Z4U5 140 aa-4.36□□□□□ -3.11
RNU6-542P-201ENST00000516405 C9orf16Q9BUW7 83 aa-4.36□□□□□ -3.11
RNU6-542P-201ENST00000516405 NXT2Q9NPJ8 142 aaKnown RBP-4.36□□□□□ -3.11
RNU6-542P-201ENST00000516405 LY75O60449 1722 aa-4.36□□□□□ -3.11
RNU6-542P-201ENST00000516405 ZFYVE9O95405 1425 aa-4.37□□□□□ -3.11
RNU6-542P-201ENST00000516405 HLA-DRB4P13762 266 aa-4.37□□□□□ -3.11
RNU6-542P-201ENST00000516405 MRPL54Q6P161 138 aaKnown RBP-4.37□□□□□ -3.11
RNU6-542P-201ENST00000516405 HLA-DRB4X5D2U9 266 aa-4.37□□□□□ -3.11
RNU6-542P-201ENST00000516405 CDK5RAP2Q96SN8 1893 aa-4.37□□□□□ -3.11
RNU6-542P-201ENST00000516405 ATP7BP35670 1465 aa-4.37□□□□□ -3.11
RNU6-542P-201ENST00000516405 SMARCA2P51531 1590 aa-4.38□□□□□ -3.11
RNU6-542P-201ENST00000516405 TRAV13-2A0A0B4J235 113 aa-4.38□□□□□ -3.11
RNU6-542P-201ENST00000516405 E7EQ34 232 aa-4.38□□□□□ -3.11
RNU6-542P-201ENST00000516405 MGST2Q99735 147 aa-4.38□□□□□ -3.11
RNU6-542P-201ENST00000516405 TRAPPC2LQ9UL33 140 aa-4.38□□□□□ -3.11
RNU6-542P-201ENST00000516405 CEBPGP53567 150 aa-4.39□□□□□ -3.11
RNU6-542P-201ENST00000516405 LAMTOR2Q9Y2Q5 125 aa-4.39□□□□□ -3.11
RNU6-542P-201ENST00000516405 UBR3Q6ZT12 1888 aa-4.4□□□□□ -3.11
RNU6-542P-201ENST00000516405 WIZO95785 1651 aa-4.4□□□□□ -3.11
RNU6-542P-201ENST00000516405 ADGRL2O95490 1459 aa-4.4□□□□□ -3.11
RNU6-542P-201ENST00000516405 WHAMMP3Q1A5X7 153 aa-4.4□□□□□ -3.11
RNU6-542P-201ENST00000516405 MED31Q9Y3C7 131 aa-4.4□□□□□ -3.11
RNU6-542P-201ENST00000516405 CAMSAP1Q5T5Y3 1602 aa-4.41□□□□□ -3.12
RNU6-542P-201ENST00000516405 TRBV7-7A0A0K0K1E9 115 aa-4.41□□□□□ -3.12
RNU6-542P-201ENST00000516405 LOC285095A0A1B0GVY8 99 aa-4.41□□□□□ -3.12
RNU6-542P-201ENST00000516405 FAM9CQ8IZT9 166 aa-4.41□□□□□ -3.12
RNU6-542P-201ENST00000516405 TSLPQ969D9 159 aa-4.41□□□□□ -3.12
RNU6-542P-201ENST00000516405 TMEM191AQ9H0A3 160 aa-4.41□□□□□ -3.12
RNU6-542P-201ENST00000516405 ARMC1Q9NVT9 282 aa-4.41□□□□□ -3.12
RNU6-542P-201ENST00000516405 PARP4Q9UKK3 1724 aaKnown RBP-4.41□□□□□ -3.12
RNU6-542P-201ENST00000516405 IL5P05113 134 aa-4.42□□□□□ -3.12
RNU6-542P-201ENST00000516405 CDKN2CP42773 168 aa-4.42□□□□□ -3.12
RNU6-542P-201ENST00000516405 PSENENQ9NZ42 101 aa-4.42□□□□□ -3.12
RNU6-542P-201ENST00000516405 V9GYQ6 96 aa-4.42□□□□□ -3.12
RNU6-542P-201ENST00000516405 CFAP47Q6ZTR5 3102 aa-4.43□□□□□ -3.12
RNU6-542P-201ENST00000516405 MON2Q7Z3U7 1717 aa-4.43□□□□□ -3.12
RNU6-542P-201ENST00000516405 IFNA1P01562 189 aa-4.43□□□□□ -3.12
RNU6-542P-201ENST00000516405 LINC00158P58513 81 aa-4.43□□□□□ -3.12
RNU6-542P-201ENST00000516405 LSM6P62312 80 aaKnown RBP-4.43□□□□□ -3.12
RNU6-542P-201ENST00000516405 SIKE1Q9BRV8 207 aa-4.43□□□□□ -3.12
RNU6-542P-201ENST00000516405 BANF2Q9H503 90 aa-4.43□□□□□ -3.12
RNU6-542P-201ENST00000516405 ARL2-SNX15V9GYD0 113 aa-4.43□□□□□ -3.12
RNU6-542P-201ENST00000516405 ANKRD30AQ9BXX3 1397 aa-4.43□□□□□ -3.12
RNU6-542P-201ENST00000516405 MAST1Q9Y2H9 1570 aa-4.44□□□□□ -3.12
RNU6-542P-201ENST00000516405 SHPRHQ149N8 1683 aa-4.44□□□□□ -3.12
RNU6-542P-201ENST00000516405 IGLV5-48A0A075B6I7 105 aa-4.44□□□□□ -3.12
RNU6-542P-201ENST00000516405 UBE2L5PA0A1B0GUS4 154 aa-4.44□□□□□ -3.12
RNU6-542P-201ENST00000516405 NIPSNAP2O75323 286 aa-4.44□□□□□ -3.12
RNU6-542P-201ENST00000516405 DEFB130BP0DP73 79 aa-4.44□□□□□ -3.12
RNU6-542P-201ENST00000516405 DEFB130AP0DP74 79 aa-4.44□□□□□ -3.12
RNU6-542P-201ENST00000516405 TMEM2Q9UHN6 1383 aa-4.44□□□□□ -3.12
RNU6-542P-201ENST00000516405 TRBV20-1A0A075B6N2 111 aa-4.45□□□□□ -3.12
RNU6-542P-201ENST00000516405 ATG12O94817 140 aa-4.45□□□□□ -3.12
RNU6-542P-201ENST00000516405 TAC4Q86UU9 113 aa-4.45□□□□□ -3.12
RNU6-542P-201ENST00000516405 DYDC1Q8WWB3 177 aa-4.45□□□□□ -3.12
RNU6-542P-201ENST00000516405 CCDC42Q96M95 316 aa-4.45□□□□□ -3.12
RNU6-542P-201ENST00000516405 MAGI3Q5TCQ9 1506 aa-4.46□□□□□ -3.12
RNU6-542P-201ENST00000516405 EHBP1L1Q8N3D4 1523 aa-4.46□□□□□ -3.12
RNU6-542P-201ENST00000516405 DEPDC5O75140 1603 aa-4.46□□□□□ -3.12
RNU6-542P-201ENST00000516405 SMIM24O75264 130 aa-4.46□□□□□ -3.12
RNU6-542P-201ENST00000516405 SYNJ1O43426 1573 aa-4.46□□□□□ -3.12
RNU6-542P-201ENST00000516405 A0A0G2JND7 137 aa-4.47□□□□□ -3.13
RNU6-542P-201ENST00000516405 A0A1B0GWA3 101 aa-4.47□□□□□ -3.13
RNU6-542P-201ENST00000516405 K7EP13 123 aa-4.47□□□□□ -3.13
RNU6-542P-201ENST00000516405 M0R129 80 aa-4.47□□□□□ -3.13
RNU6-542P-201ENST00000516405 C3orf79P0CE67 100 aa-4.47□□□□□ -3.13
RNU6-542P-201ENST00000516405 POLR2HP52434 150 aaKnown RBP-4.47□□□□□ -3.13
RNU6-542P-201ENST00000516405 PPP1R2P3Q6NXS1 205 aa-4.47□□□□□ -3.13
RNU6-542P-201ENST00000516405 DHRS4L2Q6PKH6 230 aa-4.47□□□□□ -3.13
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms