RNA–Protein interactions for RNA: ENST00000515815.5

SDHA-219, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 704 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-219ENST00000515815 SCGB3A1Q96QR1 104 aa7.43□□□□□ -1.22
SDHA-219ENST00000515815 MRPL18Q9H0U6 180 aaKnown RBP7.43□□□□□ -1.22
SDHA-219ENST00000515815 RPS10P5Q9NQ39 176 aa7.43□□□□□ -1.22
SDHA-219ENST00000515815 CARHSP1Q9Y2V2 147 aaKnown RBP7.43□□□□□ -1.22
SDHA-219ENST00000515815 UBE2BP63146 152 aa7.42□□□□□ -1.22
SDHA-219ENST00000515815 LINC00469Q8N7U9 141 aa7.42□□□□□ -1.22
SDHA-219ENST00000515815 ALKBH7Q9BT30 221 aaPredicted RBP7.42□□□□□ -1.22
SDHA-219ENST00000515815 CDKN2A-AS1Q9UH64 79 aa7.42□□□□□ -1.22
SDHA-219ENST00000515815 C10orf91Q5T1B1 145 aa7.41□□□□□ -1.22
SDHA-219ENST00000515815 F8VRH5 84 aa7.4□□□□□ -1.22
SDHA-219ENST00000515815 FABP9Q0Z7S8 132 aa7.4□□□□□ -1.22
SDHA-219ENST00000515815 NDUFA5Q16718 116 aa7.4□□□□□ -1.22
SDHA-219ENST00000515815 C6orf226Q5I0X4 101 aa7.4□□□□□ -1.22
SDHA-219ENST00000515815 LINC01546A6NGU7 62 aa7.39□□□□□ -1.23
SDHA-219ENST00000515815 SMIM1B2RUZ4 78 aa7.39□□□□□ -1.23
SDHA-219ENST00000515815 C9orf129Q5T035 196 aaKnown RBP7.39□□□□□ -1.23
SDHA-219ENST00000515815 IGLV5-45A0A087WSX0 123 aa7.38□□□□□ -1.23
SDHA-219ENST00000515815 TINCRA0A1B0GVN0 87 aa7.38□□□□□ -1.23
SDHA-219ENST00000515815 IGLV7-43P04211 117 aa7.38□□□□□ -1.23
SDHA-219ENST00000515815 SRSF9Q13242 221 aaKnown RBP eCLIP7.38□□□□□ -1.23
SDHA-219ENST00000515815 PMVKQ15126 192 aa7.38□□□□□ -1.23
SDHA-219ENST00000515815 DIRC1Q969H9 104 aa7.38□□□□□ -1.23
SDHA-219ENST00000515815 SNAPINO95295 136 aa7.37□□□□□ -1.23
SDHA-219ENST00000515815 PDZD11Q5EBL8 140 aa7.37□□□□□ -1.23
SDHA-219ENST00000515815 COX7B2Q8TF08 81 aa7.37□□□□□ -1.23
SDHA-219ENST00000515815 H0Y9J4 135 aa7.36□□□□□ -1.23
SDHA-219ENST00000515815 H3BRM9 83 aa7.36□□□□□ -1.23
SDHA-219ENST00000515815 HBDP02042 147 aa7.36□□□□□ -1.23
SDHA-219ENST00000515815 APOC3P02656 99 aa7.36□□□□□ -1.23
SDHA-219ENST00000515815 SPINK8P0C7L1 97 aa7.36□□□□□ -1.23
SDHA-219ENST00000515815 KRTAP7-1Q8IUC3 87 aa7.36□□□□□ -1.23
SDHA-219ENST00000515815 SVBPQ8N300 66 aa7.36□□□□□ -1.23
SDHA-219ENST00000515815 XAGE1AQ9HD64 81 aa7.36□□□□□ -1.23
SDHA-219ENST00000515815 TRAPPC1Q9Y5R8 145 aa7.36□□□□□ -1.23
SDHA-219ENST00000515815 HMCN2Q8NDA2 5059 aa7.35□□□□□ -1.23
SDHA-219ENST00000515815 KRTAP11-1Q8IUC1 163 aa7.35□□□□□ -1.23
SDHA-219ENST00000515815 C18orf32Q8TCD1 76 aa7.35□□□□□ -1.23
SDHA-219ENST00000515815 CST9LQ9H4G1 147 aa7.35□□□□□ -1.23
SDHA-219ENST00000515815 A0A096LNJ9 63 aa7.33□□□□□ -1.24
SDHA-219ENST00000515815 ATP5LO75964 103 aa7.33□□□□□ -1.24
SDHA-219ENST00000515815 IGLC3P0DOY3 106 aa7.33□□□□□ -1.24
SDHA-219ENST00000515815 NDUFA6P56556 154 aa7.33□□□□□ -1.24
SDHA-219ENST00000515815 NUPR1O60356 82 aa7.32□□□□□ -1.24
SDHA-219ENST00000515815 ODF1Q14990 250 aa7.32□□□□□ -1.24
SDHA-219ENST00000515815 PMCHL1Q16048 86 aa7.32□□□□□ -1.24
SDHA-219ENST00000515815 LBHQ53QV2 105 aaPredicted RBP7.32□□□□□ -1.24
SDHA-219ENST00000515815 TNXBP22105 4242 aa7.31□□□□□ -1.24
SDHA-219ENST00000515815 KRTAP10-8P60410 259 aa7.31□□□□□ -1.24
SDHA-219ENST00000515815 RAB5BP61020 215 aa7.31□□□□□ -1.24
SDHA-219ENST00000515815 MRPL55Q7Z7F7 128 aaKnown RBP7.31□□□□□ -1.24
SDHA-219ENST00000515815 URB1-AS1Q96HZ7 61 aa7.31□□□□□ -1.24
SDHA-219ENST00000515815 TP73-AS1Q9UF72 201 aa7.31□□□□□ -1.24
SDHA-219ENST00000515815 LINC00614P0C842 121 aa7.3□□□□□ -1.24
SDHA-219ENST00000515815 ZNF22P17026 224 aaPredicted RBP7.3□□□□□ -1.24
SDHA-219ENST00000515815 C22orf24Q9Y442 160 aa7.3□□□□□ -1.24
SDHA-219ENST00000515815 NKAPP1Q8N9T2 125 aa7.29□□□□□ -1.24
SDHA-219ENST00000515815 IGLV1-50A0A075B6I6 118 aa7.28□□□□□ -1.24
SDHA-219ENST00000515815 SFTA2Q6UW10 78 aa7.28□□□□□ -1.24
SDHA-219ENST00000515815 PRR26Q8N8Z3 221 aa7.28□□□□□ -1.24
SDHA-219ENST00000515815 IGLV5-39A0A0G2JS06 123 aa7.27□□□□□ -1.25
SDHA-219ENST00000515815 RPL13AP40429 203 aaKnown RBP7.27□□□□□ -1.25
SDHA-219ENST00000515815 TMEM170BQ5T4T1 132 aa7.27□□□□□ -1.25
SDHA-219ENST00000515815 C11orf86A6NJI1 115 aa7.26□□□□□ -1.25
SDHA-219ENST00000515815 BCE1O60756 84 aa7.26□□□□□ -1.25
SDHA-219ENST00000515815 KRTAP1-4P0C5Y4 121 aa7.26□□□□□ -1.25
SDHA-219ENST00000515815 PFN2P35080 140 aa7.26□□□□□ -1.25
SDHA-219ENST00000515815 RPL28P46779 137 aaKnown RBP7.26□□□□□ -1.25
SDHA-219ENST00000515815 CHCHD1Q96BP2 118 aaKnown RBP7.26□□□□□ -1.25
SDHA-219ENST00000515815 ERG28Q9UKR5 140 aa7.26□□□□□ -1.25
SDHA-219ENST00000515815 IGLV5-37A0A075B6J1 123 aa7.25□□□□□ -1.25
SDHA-219ENST00000515815 GAGE10A6NGK3 116 aa7.25□□□□□ -1.25
SDHA-219ENST00000515815 ZNF861PO60384 105 aa7.25□□□□□ -1.25
SDHA-219ENST00000515815 BAGE3Q86Y29 109 aa7.25□□□□□ -1.25
SDHA-219ENST00000515815 CHTOPQ9Y3Y2 248 aaKnown RBP7.25□□□□□ -1.25
SDHA-219ENST00000515815 RPL37AP8A6NKH3 93 aa7.24□□□□□ -1.25
SDHA-219ENST00000515815 CBLN2Q8IUK8 224 aa7.24□□□□□ -1.25
SDHA-219ENST00000515815 YPEL4Q96NS1 127 aa7.24□□□□□ -1.25
SDHA-219ENST00000515815 HSBP1O75506 76 aa7.23□□□□□ -1.25
SDHA-219ENST00000515815 COX17Q14061 63 aa7.23□□□□□ -1.25
SDHA-219ENST00000515815 IFI27L1Q96BM0 104 aa7.23□□□□□ -1.25
SDHA-219ENST00000515815 LINC00167Q96N53 147 aa7.23□□□□□ -1.25
SDHA-219ENST00000515815 UBR4Q5T4S7 5183 aa7.23□□□□□ -1.25
SDHA-219ENST00000515815 IGKV2-28A0A075B6P5 120 aa7.22□□□□□ -1.25
SDHA-219ENST00000515815 TRAV12-1A0A0B4J245 112 aa7.22□□□□□ -1.25
SDHA-219ENST00000515815 IGKV2D-28P01615 120 aa7.22□□□□□ -1.25
SDHA-219ENST00000515815 UBE2AP49459 152 aa7.22□□□□□ -1.25
SDHA-219ENST00000515815 ZNF625Q96I27 306 aaPredicted RBP7.22□□□□□ -1.25
SDHA-219ENST00000515815 SND1-IT1Q9HBX3 110 aa7.22□□□□□ -1.25
SDHA-219ENST00000515815 RPL24P83731 157 aaKnown RBP7.2□□□□□ -1.26
SDHA-219ENST00000515815 TMEM223A0PJW6 202 aa7.19□□□□□ -1.26
SDHA-219ENST00000515815 H0Y8G0 127 aa7.19□□□□□ -1.26
SDHA-219ENST00000515815 SCO1O75880 301 aa7.19□□□□□ -1.26
SDHA-219ENST00000515815 VPREB1P12018 145 aa7.19□□□□□ -1.26
SDHA-219ENST00000515815 PRLHP81277 87 aa7.17□□□□□ -1.26
SDHA-219ENST00000515815 MEIG1Q5JSS6 88 aa7.17□□□□□ -1.26
SDHA-219ENST00000515815 FAM19A1Q7Z5A9 133 aa7.17□□□□□ -1.26
SDHA-219ENST00000515815 KRTAP13-1Q8IUC0 172 aa7.17□□□□□ -1.26
SDHA-219ENST00000515815 FAM19A2Q8N3H0 131 aa7.17□□□□□ -1.26
SDHA-219ENST00000515815 TMEM126AQ9H061 195 aa7.17□□□□□ -1.26
SDHA-219ENST00000515815 TRGC2P03986 189 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms