RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 NDUFA4L2Q9NRX3 87 aa1.45□□□□□ -2.18
HERC4-215ENST00000515753 TAS2R8Q9NYW2 309 aa1.45□□□□□ -2.18
HERC4-215ENST00000515753 RABAC1Q9UI14 185 aa1.45□□□□□ -2.18
HERC4-215ENST00000515753 DNAH1Q9P2D7 4330 aa1.44□□□□□ -2.18
HERC4-215ENST00000515753 NOTCH1P46531 2555 aa1.44□□□□□ -2.18
HERC4-215ENST00000515753 WNK2Q9Y3S1 2297 aa1.44□□□□□ -2.18
HERC4-215ENST00000515753 TRAV3A0A0B4J244 114 aa1.44□□□□□ -2.18
HERC4-215ENST00000515753 TRAV1-1A0A0B4J248 108 aa1.44□□□□□ -2.18
HERC4-215ENST00000515753 PNMA8CA0A1B0GUJ8 204 aa1.44□□□□□ -2.18
HERC4-215ENST00000515753 SMIM31A0A1B0GVY4 71 aa1.44□□□□□ -2.18
HERC4-215ENST00000515753 OR2T8A6NH00 312 aa1.44□□□□□ -2.18
HERC4-215ENST00000515753 I3L2K1 104 aa1.44□□□□□ -2.18
HERC4-215ENST00000515753 K7EP13 123 aa1.44□□□□□ -2.18
HERC4-215ENST00000515753 SLC25A4P12235 298 aa1.44□□□□□ -2.18
HERC4-215ENST00000515753 ROMO1P60602 79 aa1.44□□□□□ -2.18
HERC4-215ENST00000515753 PRCDQ00LT1 54 aa1.44□□□□□ -2.18
HERC4-215ENST00000515753 WT1-ASQ06250 92 aa1.44□□□□□ -2.18
HERC4-215ENST00000515753 Q1T7F1 81 aa1.44□□□□□ -2.18
HERC4-215ENST00000515753 C10orf55Q5SWW7 151 aa1.44□□□□□ -2.18
HERC4-215ENST00000515753 Q5XG85 94 aa1.44□□□□□ -2.18
HERC4-215ENST00000515753 OR2T35Q8NGX2 323 aa1.44□□□□□ -2.18
HERC4-215ENST00000515753 TMEM203Q969S6 136 aa1.44□□□□□ -2.18
HERC4-215ENST00000515753 S100A16Q96FQ6 103 aaKnown RBP1.44□□□□□ -2.18
HERC4-215ENST00000515753 ZC2HC1AQ96GY0 325 aa1.44□□□□□ -2.18
HERC4-215ENST00000515753 RETNLBQ9BQ08 111 aa1.44□□□□□ -2.18
HERC4-215ENST00000515753 VWFP04275 2813 aa1.44□□□□□ -2.18
HERC4-215ENST00000515753 RYR2Q92736 4967 aa1.44□□□□□ -2.18
HERC4-215ENST00000515753 TENM1Q9UKZ4 2725 aa1.44□□□□□ -2.18
HERC4-215ENST00000515753 SACSQ9NZJ4 4579 aa1.43□□□□□ -2.18
HERC4-215ENST00000515753 PKD1L1Q8TDX9 2849 aa1.43□□□□□ -2.18
HERC4-215ENST00000515753 IGKV3-7A0A075B6H7 116 aa1.43□□□□□ -2.18
HERC4-215ENST00000515753 NBDYA0A0U1RRE5 68 aa1.43□□□□□ -2.18
HERC4-215ENST00000515753 SNRPGP15A8MWD9 76 aa1.43□□□□□ -2.18
HERC4-215ENST00000515753 E7EUB6 86 aa1.43□□□□□ -2.18
HERC4-215ENST00000515753 H3BNG1 76 aa1.43□□□□□ -2.18
HERC4-215ENST00000515753 K7EIM0 57 aa1.43□□□□□ -2.18
HERC4-215ENST00000515753 M0R2N4 97 aa1.43□□□□□ -2.18
HERC4-215ENST00000515753 MT-ND6P03923 174 aa1.43□□□□□ -2.18
HERC4-215ENST00000515753 HLA-DRB4P13762 266 aa1.43□□□□□ -2.18
HERC4-215ENST00000515753 ETV6P41212 452 aa1.43□□□□□ -2.18
HERC4-215ENST00000515753 FXYD4P59646 89 aa1.43□□□□□ -2.18
HERC4-215ENST00000515753 LSM3P62310 102 aaKnown RBP1.43□□□□□ -2.18
HERC4-215ENST00000515753 DEFA5Q01523 94 aa1.43□□□□□ -2.18
HERC4-215ENST00000515753 RNASE10Q5GAN6 216 aaKnown RBP1.43□□□□□ -2.18
HERC4-215ENST00000515753 PSMG4Q5JS54 123 aa1.43□□□□□ -2.18
HERC4-215ENST00000515753 TMEM91Q6ZNR0 172 aa1.43□□□□□ -2.18
HERC4-215ENST00000515753 FOXI2Q6ZQN5 318 aa1.43□□□□□ -2.18
HERC4-215ENST00000515753 RNASE11Q8TAA1 199 aaKnown RBP1.43□□□□□ -2.18
HERC4-215ENST00000515753 TMEM254Q8TBM7 123 aa1.43□□□□□ -2.18
HERC4-215ENST00000515753 SPACA4Q8TDM5 124 aa1.43□□□□□ -2.18
HERC4-215ENST00000515753 RPRMQ9NS64 109 aa1.43□□□□□ -2.18
HERC4-215ENST00000515753 HLA-DRB4X5D2U9 266 aa1.43□□□□□ -2.18
HERC4-215ENST00000515753 HUWE1Q7Z6Z7 4374 aaKnown RBP1.43□□□□□ -2.18
HERC4-215ENST00000515753 FCGBPQ9Y6R7 5405 aaPredicted RBP1.43□□□□□ -2.18
HERC4-215ENST00000515753 A0A087WSZ3 146 aa1.42□□□□□ -2.18
HERC4-215ENST00000515753 TRAV12-1A0A0B4J245 112 aa1.42□□□□□ -2.18
HERC4-215ENST00000515753 DEFB4AO15263 64 aa1.42□□□□□ -2.18
HERC4-215ENST00000515753 PDE6HQ13956 83 aa1.42□□□□□ -2.18
HERC4-215ENST00000515753 INSL4Q14641 139 aa1.42□□□□□ -2.18
HERC4-215ENST00000515753 KRTAP6-3Q3LI67 103 aa1.42□□□□□ -2.18
HERC4-215ENST00000515753 TDRG1Q3Y452 100 aa1.42□□□□□ -2.18
HERC4-215ENST00000515753 TMEM14EPQ6UXP3 125 aa1.42□□□□□ -2.18
HERC4-215ENST00000515753 ZNF818PQ6ZRF7 136 aa1.42□□□□□ -2.18
HERC4-215ENST00000515753 BRK1Q8WUW1 75 aa1.42□□□□□ -2.18
HERC4-215ENST00000515753 SFT2D1Q8WV19 159 aa1.42□□□□□ -2.18
HERC4-215ENST00000515753 HYLS1Q96M11 299 aa1.42□□□□□ -2.18
HERC4-215ENST00000515753 Q9H521 79 aa1.42□□□□□ -2.18
HERC4-215ENST00000515753 OR5AC2Q9NZP5 309 aa1.42□□□□□ -2.18
HERC4-215ENST00000515753 LSM2Q9Y333 95 aaKnown RBP1.42□□□□□ -2.18
HERC4-215ENST00000515753 U3KQ87 197 aa1.42□□□□□ -2.18
HERC4-215ENST00000515753 EPPK1P58107 5090 aaKnown RBP1.42□□□□□ -2.18
HERC4-215ENST00000515753 DYNC2H1Q8NCM8 4307 aaKnown RBP1.42□□□□□ -2.18
HERC4-215ENST00000515753 TENM2Q9NT68 2774 aa1.42□□□□□ -2.18
HERC4-215ENST00000515753 CMYA5Q8N3K9 4069 aa1.41□□□□□ -2.18
HERC4-215ENST00000515753 TGP01266 2768 aa1.41□□□□□ -2.18
HERC4-215ENST00000515753 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.41□□□□□ -2.18
HERC4-215ENST00000515753 C3orf85A0A1B0GTC6 90 aa1.41□□□□□ -2.18
HERC4-215ENST00000515753 hDV103S1A0JD37 113 aa1.41□□□□□ -2.18
HERC4-215ENST00000515753 UQCRQO14949 82 aa1.41□□□□□ -2.18
HERC4-215ENST00000515753 IGLC1P0CG04 106 aa1.41□□□□□ -2.18
HERC4-215ENST00000515753 TPT1P13693 172 aaKnown RBP1.41□□□□□ -2.18
HERC4-215ENST00000515753 FABP4P15090 132 aa1.41□□□□□ -2.18
HERC4-215ENST00000515753 HTN3P15516 51 aa1.41□□□□□ -2.18
HERC4-215ENST00000515753 FOXA3P55318 350 aaPredicted RBP1.41□□□□□ -2.18
HERC4-215ENST00000515753 KRTAP12-3P60328 96 aa1.41□□□□□ -2.18
HERC4-215ENST00000515753 MRPS10P82664 201 aaKnown RBP1.41□□□□□ -2.18
HERC4-215ENST00000515753 HIST1H1AQ02539 215 aaPredicted RBP1.41□□□□□ -2.18
HERC4-215ENST00000515753 SSBP1Q04837 148 aaKnown RBP1.41□□□□□ -2.18
HERC4-215ENST00000515753 Q8N814 137 aa1.41□□□□□ -2.18
HERC4-215ENST00000515753 ZCCHC13Q8WW36 166 aaKnown RBP1.41□□□□□ -2.18
HERC4-215ENST00000515753 LINC00052Q96N35 136 aa1.41□□□□□ -2.18
HERC4-215ENST00000515753 AP1S3Q96PC3 154 aa1.41□□□□□ -2.18
HERC4-215ENST00000515753 CIB3Q96Q77 187 aaPredicted RBP1.41□□□□□ -2.18
HERC4-215ENST00000515753 TP53RKQ96S44 253 aa1.41□□□□□ -2.18
HERC4-215ENST00000515753 TIMM8BQ9Y5J9 83 aaPredicted RBP1.41□□□□□ -2.18
HERC4-215ENST00000515753 TENM3Q9P273 2699 aa1.41□□□□□ -2.18
HERC4-215ENST00000515753 HERC2O95714 4834 aa1.41□□□□□ -2.18
HERC4-215ENST00000515753 NBEAL2Q6ZNJ1 2754 aa1.4□□□□□ -2.19
HERC4-215ENST00000515753 DNAH3Q8TD57 4116 aa1.4□□□□□ -2.19
HERC4-215ENST00000515753 CEBPZOSA8MTT3 80 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms