RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 RTL8BQ17RB0 113 aa0.87□□□□□ -2.27
LINC01088-211ENST00000515597 AADACL3Q5VUY0 350 aa0.87□□□□□ -2.27
LINC01088-211ENST00000515597 ENHOQ6UWT2 76 aa0.87□□□□□ -2.27
LINC01088-211ENST00000515597 TCTE3Q8IZS6 198 aa0.87□□□□□ -2.27
LINC01088-211ENST00000515597 HIST3H2BBQ8N257 126 aa0.87□□□□□ -2.27
LINC01088-211ENST00000515597 OR8J3Q8NGG0 315 aa0.87□□□□□ -2.27
LINC01088-211ENST00000515597 VSTM2AQ8TAG5 236 aa0.87□□□□□ -2.27
LINC01088-211ENST00000515597 TMEM167AQ8TBQ9 72 aa0.87□□□□□ -2.27
LINC01088-211ENST00000515597 CANT1Q8WVQ1 401 aa0.87□□□□□ -2.27
LINC01088-211ENST00000515597 AP1S3Q96PC3 154 aa0.87□□□□□ -2.27
LINC01088-211ENST00000515597 SCGB3A1Q96QR1 104 aa0.87□□□□□ -2.27
LINC01088-211ENST00000515597 SPRR2FQ96RM1 72 aa0.87□□□□□ -2.27
LINC01088-211ENST00000515597 SLC25A21Q9BQT8 299 aaPredicted RBP0.87□□□□□ -2.27
LINC01088-211ENST00000515597 IL36BQ9NZH7 164 aa0.87□□□□□ -2.27
LINC01088-211ENST00000515597 HSPB8Q9UJY1 196 aa0.87□□□□□ -2.27
LINC01088-211ENST00000515597 TRAPPC2LQ9UL33 140 aa0.87□□□□□ -2.27
LINC01088-211ENST00000515597 TIMM9Q9Y5J7 89 aa0.87□□□□□ -2.27
LINC01088-211ENST00000515597 TIMM8BQ9Y5J9 83 aaPredicted RBP0.87□□□□□ -2.27
LINC01088-211ENST00000515597 FAM24AA6NFZ4 105 aa0.86□□□□□ -2.27
LINC01088-211ENST00000515597 TMEM212A6NML5 194 aa0.86□□□□□ -2.27
LINC01088-211ENST00000515597 FABP5P3A8MUU1 101 aa0.86□□□□□ -2.27
LINC01088-211ENST00000515597 GABARAPH6UMI1 98 aa0.86□□□□□ -2.27
LINC01088-211ENST00000515597 M0R129 80 aa0.86□□□□□ -2.27
LINC01088-211ENST00000515597 SPINK4O60575 86 aa0.86□□□□□ -2.27
LINC01088-211ENST00000515597 PITX3O75364 302 aa0.86□□□□□ -2.27
LINC01088-211ENST00000515597 CST7O76096 145 aa0.86□□□□□ -2.27
LINC01088-211ENST00000515597 IGKV1-5P01602 117 aa0.86□□□□□ -2.27
LINC01088-211ENST00000515597 HIST1H1BP16401 226 aaKnown RBP0.86□□□□□ -2.27
LINC01088-211ENST00000515597 SDC2P34741 201 aa0.86□□□□□ -2.27
LINC01088-211ENST00000515597 EIF2B2P49770 351 aaKnown RBP0.86□□□□□ -2.27
LINC01088-211ENST00000515597 NCS1P62166 190 aa0.86□□□□□ -2.27
LINC01088-211ENST00000515597 RPS28P62857 69 aaKnown RBP0.86□□□□□ -2.27
LINC01088-211ENST00000515597 COX6A2Q02221 97 aa0.86□□□□□ -2.27
LINC01088-211ENST00000515597 ZNF846Q147U1 533 aa0.86□□□□□ -2.27
LINC01088-211ENST00000515597 MSMO1Q15800 293 aa0.86□□□□□ -2.27
LINC01088-211ENST00000515597 NDUFA5Q16718 116 aa0.86□□□□□ -2.27
LINC01088-211ENST00000515597 TDRG1Q3Y452 100 aa0.86□□□□□ -2.27
LINC01088-211ENST00000515597 VMA21Q3ZAQ7 101 aa0.86□□□□□ -2.27
LINC01088-211ENST00000515597 Q56UQ5 140 aa0.86□□□□□ -2.27
LINC01088-211ENST00000515597 KHDC3LQ587J8 217 aa0.86□□□□□ -2.27
LINC01088-211ENST00000515597 UNQ6190/PRO20217Q6UXQ8 127 aa0.86□□□□□ -2.27
LINC01088-211ENST00000515597 FOXI2Q6ZQN5 318 aa0.86□□□□□ -2.27
LINC01088-211ENST00000515597 LCA10Q71F78 164 aa0.86□□□□□ -2.27
LINC01088-211ENST00000515597 MIR17HGQ75NE6 70 aa0.86□□□□□ -2.27
LINC01088-211ENST00000515597 TMEM203Q969S6 136 aa0.86□□□□□ -2.27
LINC01088-211ENST00000515597 LINC00052Q96N35 136 aa0.86□□□□□ -2.27
LINC01088-211ENST00000515597 HIST1H2BLQ99880 126 aa0.86□□□□□ -2.27
LINC01088-211ENST00000515597 TCEAL7Q9BRU2 100 aa0.86□□□□□ -2.27
LINC01088-211ENST00000515597 DERL1Q9BUN8 251 aa0.86□□□□□ -2.27
LINC01088-211ENST00000515597 YIPF3Q9GZM5 350 aa0.86□□□□□ -2.27
LINC01088-211ENST00000515597 BANF2Q9H503 90 aa0.86□□□□□ -2.27
LINC01088-211ENST00000515597 CMC2Q9NRP2 79 aa0.86□□□□□ -2.27
LINC01088-211ENST00000515597 CCDC167Q9P0B6 97 aa0.86□□□□□ -2.27
LINC01088-211ENST00000515597 A0A096LNI7 61 aa0.85□□□□□ -2.27
LINC01088-211ENST00000515597 HMSDA8MTL9 139 aa0.85□□□□□ -2.27
LINC01088-211ENST00000515597 K7ERU9 68 aa0.85□□□□□ -2.27
LINC01088-211ENST00000515597 TAX1BP3O14907 124 aa0.85□□□□□ -2.27
LINC01088-211ENST00000515597 LEPROTO15243 131 aa0.85□□□□□ -2.27
LINC01088-211ENST00000515597 HIST1H2BKO60814 126 aa0.85□□□□□ -2.27
LINC01088-211ENST00000515597 TCL1BO95988 128 aa0.85□□□□□ -2.27
LINC01088-211ENST00000515597 CRPP02741 224 aa0.85□□□□□ -2.27
LINC01088-211ENST00000515597 HIST1H2BJP06899 126 aa0.85□□□□□ -2.27
LINC01088-211ENST00000515597 HTR1AP08908 422 aa0.85□□□□□ -2.27
LINC01088-211ENST00000515597 FABP2P12104 132 aa0.85□□□□□ -2.27
LINC01088-211ENST00000515597 RPL7P18124 248 aaKnown RBP0.85□□□□□ -2.27
LINC01088-211ENST00000515597 S100A11P31949 105 aa0.85□□□□□ -2.27
LINC01088-211ENST00000515597 RPL35P42766 123 aaKnown RBP0.85□□□□□ -2.27
LINC01088-211ENST00000515597 LSM3P62310 102 aaKnown RBP0.85□□□□□ -2.27
LINC01088-211ENST00000515597 MRPS10P82664 201 aaKnown RBP0.85□□□□□ -2.27
LINC01088-211ENST00000515597 MIAQ16674 131 aa0.85□□□□□ -2.27
LINC01088-211ENST00000515597 BPIFA4PQ86YQ2 179 aa0.85□□□□□ -2.27
LINC01088-211ENST00000515597 PRR15Q8IV56 129 aa0.85□□□□□ -2.27
LINC01088-211ENST00000515597 C12orf45Q8N5I9 185 aaPredicted RBP0.85□□□□□ -2.27
LINC01088-211ENST00000515597 TMEM229BQ8NBD8 167 aa0.85□□□□□ -2.27
LINC01088-211ENST00000515597 Q8TAT8 98 aa0.85□□□□□ -2.27
LINC01088-211ENST00000515597 TMEM263Q8WUH6 116 aaKnown RBP0.85□□□□□ -2.27
LINC01088-211ENST00000515597 SMIM3Q9BZL3 60 aa0.85□□□□□ -2.27
LINC01088-211ENST00000515597 OSTCQ9NRP0 149 aa0.85□□□□□ -2.27
LINC01088-211ENST00000515597 NDUFA4L2Q9NRX3 87 aa0.85□□□□□ -2.27
LINC01088-211ENST00000515597 NHP2Q9NX24 153 aaKnown RBP0.85□□□□□ -2.27
LINC01088-211ENST00000515597 PRO0255Q9UI72 69 aa0.85□□□□□ -2.27
LINC01088-211ENST00000515597 EPDR1Q9UM22 224 aa0.85□□□□□ -2.27
LINC01088-211ENST00000515597 RBM7Q9Y580 266 aaKnown RBP0.85□□□□□ -2.27
LINC01088-211ENST00000515597 MUC5BQ9HC84 5762 aaPredicted RBP0.85□□□□□ -2.27
LINC01088-211ENST00000515597 C7orf71A4D174 169 aa0.84□□□□□ -2.27
LINC01088-211ENST00000515597 C9JAW5 83 aa0.84□□□□□ -2.27
LINC01088-211ENST00000515597 MCRIP1C9JLW8 97 aa0.84□□□□□ -2.27
LINC01088-211ENST00000515597 TMEM256-PLSCR3K7ERE1 68 aa0.84□□□□□ -2.27
LINC01088-211ENST00000515597 MT-ND6P03923 174 aa0.84□□□□□ -2.27
LINC01088-211ENST00000515597 MT1BP07438 61 aa0.84□□□□□ -2.27
LINC01088-211ENST00000515597 DEFA4P12838 97 aa0.84□□□□□ -2.27
LINC01088-211ENST00000515597 SRIP30626 198 aa0.84□□□□□ -2.27
LINC01088-211ENST00000515597 ETV6P41212 452 aa0.84□□□□□ -2.27
LINC01088-211ENST00000515597 MT4P47944 62 aa0.84□□□□□ -2.27
LINC01088-211ENST00000515597 SNRPGP62308 76 aaKnown RBP0.84□□□□□ -2.27
LINC01088-211ENST00000515597 NEDD8Q15843 81 aa0.84□□□□□ -2.27
LINC01088-211ENST00000515597 MPV17LQ2QL34 196 aa0.84□□□□□ -2.27
LINC01088-211ENST00000515597 LINC01554Q52M75 96 aa0.84□□□□□ -2.27
LINC01088-211ENST00000515597 EIF5AL1Q6IS14 154 aaKnown RBP0.84□□□□□ -2.27
LINC01088-211ENST00000515597 FP248Q71RG6 208 aaPredicted RBP0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms