RNA–Protein interactions for RNA: ENST00000515533.1

CDC42SE2-212, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-212ENST00000515533 RPL13AP40429 203 aaKnown RBP5.36□□□□□ -1.55
CDC42SE2-212ENST00000515533 RPL23P62829 140 aaKnown RBP5.36□□□□□ -1.55
CDC42SE2-212ENST00000515533 MRPS36P82909 103 aaKnown RBP5.36□□□□□ -1.55
CDC42SE2-212ENST00000515533 SMDT1Q9H4I9 107 aa5.36□□□□□ -1.55
CDC42SE2-212ENST00000515533 SMIM27A0A1W2PRY6 76 aa5.35□□□□□ -1.55
CDC42SE2-212ENST00000515533 F8W036 122 aa5.35□□□□□ -1.55
CDC42SE2-212ENST00000515533 RAB5AP20339 215 aa5.35□□□□□ -1.55
CDC42SE2-212ENST00000515533 PRR4Q16378 134 aa5.35□□□□□ -1.55
CDC42SE2-212ENST00000515533 KRTAP11-1Q8IUC1 163 aa5.35□□□□□ -1.55
CDC42SE2-212ENST00000515533 URB1-AS1Q96HZ7 61 aa5.35□□□□□ -1.55
CDC42SE2-212ENST00000515533 PACRGQ96M98 296 aaPredicted RBP5.35□□□□□ -1.55
CDC42SE2-212ENST00000515533 NAT8Q9UHE5 227 aa5.35□□□□□ -1.55
CDC42SE2-212ENST00000515533 TRBV30A0A0K0K1B3 111 aa5.34□□□□□ -1.55
CDC42SE2-212ENST00000515533 NDUFC2-KCTD14E9PQ53 114 aa5.34□□□□□ -1.55
CDC42SE2-212ENST00000515533 NPYP01303 97 aa5.34□□□□□ -1.55
CDC42SE2-212ENST00000515533 KRTAP1-4P0C5Y4 121 aa5.34□□□□□ -1.55
CDC42SE2-212ENST00000515533 MRPL54Q6P161 138 aaKnown RBP5.34□□□□□ -1.55
CDC42SE2-212ENST00000515533 FAM104AQ969W3 186 aa5.34□□□□□ -1.55
CDC42SE2-212ENST00000515533 PPBPP02775 128 aa5.33□□□□□ -1.56
CDC42SE2-212ENST00000515533 KIAA0087Q14695 138 aa5.33□□□□□ -1.56
CDC42SE2-212ENST00000515533 ORMDL3Q8N138 153 aa5.33□□□□□ -1.56
CDC42SE2-212ENST00000515533 C2orf88Q9BSF0 95 aa5.33□□□□□ -1.56
CDC42SE2-212ENST00000515533 IGLV4-3A0A075B6K6 122 aa5.32□□□□□ -1.56
CDC42SE2-212ENST00000515533 A0A0U1RQV1 116 aa5.32□□□□□ -1.56
CDC42SE2-212ENST00000515533 PRSS2P07478 247 aa5.32□□□□□ -1.56
CDC42SE2-212ENST00000515533 LINC00242Q5T6M2 205 aa5.32□□□□□ -1.56
CDC42SE2-212ENST00000515533 C2orf82Q6UX34 121 aa5.32□□□□□ -1.56
CDC42SE2-212ENST00000515533 TEX43Q6ZNM6 134 aa5.32□□□□□ -1.56
CDC42SE2-212ENST00000515533 KRTAP7-1Q8IUC3 87 aa5.32□□□□□ -1.56
CDC42SE2-212ENST00000515533 TMEM141Q96I45 108 aa5.32□□□□□ -1.56
CDC42SE2-212ENST00000515533 PYGO1Q9Y3Y4 419 aa5.32□□□□□ -1.56
CDC42SE2-212ENST00000515533 CKS1BP61024 79 aa5.31□□□□□ -1.56
CDC42SE2-212ENST00000515533 C9orf129Q5T035 196 aaKnown RBP5.31□□□□□ -1.56
CDC42SE2-212ENST00000515533 Q6ZN92 141 aa5.31□□□□□ -1.56
CDC42SE2-212ENST00000515533 TMEM136Q6ZRR5 245 aa5.31□□□□□ -1.56
CDC42SE2-212ENST00000515533 TOMM7Q9P0U1 55 aa5.31□□□□□ -1.56
CDC42SE2-212ENST00000515533 CARHSP1Q9Y2V2 147 aaKnown RBP5.31□□□□□ -1.56
CDC42SE2-212ENST00000515533 A0A1B0GXF2 115 aa5.3□□□□□ -1.56
CDC42SE2-212ENST00000515533 NUPR1O60356 82 aa5.3□□□□□ -1.56
CDC42SE2-212ENST00000515533 ZNF861PO60384 105 aa5.3□□□□□ -1.56
CDC42SE2-212ENST00000515533 PEA15Q15121 130 aa5.3□□□□□ -1.56
CDC42SE2-212ENST00000515533 LINC01561Q8N1V8 128 aa5.3□□□□□ -1.56
CDC42SE2-212ENST00000515533 PRELID3AQ96N28 172 aa5.3□□□□□ -1.56
CDC42SE2-212ENST00000515533 LBHQ53QV2 105 aaPredicted RBP5.29□□□□□ -1.56
CDC42SE2-212ENST00000515533 C6orf226Q5I0X4 101 aa5.29□□□□□ -1.56
CDC42SE2-212ENST00000515533 ATP5L2Q7Z4Y8 100 aa5.29□□□□□ -1.56
CDC42SE2-212ENST00000515533 LINC00469Q8N7U9 141 aa5.29□□□□□ -1.56
CDC42SE2-212ENST00000515533 MAP1LC3AQ9H492 121 aa5.29□□□□□ -1.56
CDC42SE2-212ENST00000515533 CYSLTR1Q9Y271 337 aa5.29□□□□□ -1.56
CDC42SE2-212ENST00000515533 LOC389332A0A1B0GUA5 103 aa5.28□□□□□ -1.56
CDC42SE2-212ENST00000515533 C9JQL5 133 aa5.28□□□□□ -1.56
CDC42SE2-212ENST00000515533 TSPAN13O95857 204 aa5.28□□□□□ -1.56
CDC42SE2-212ENST00000515533 C2orf66Q6UXQ4 117 aa5.28□□□□□ -1.56
CDC42SE2-212ENST00000515533 Q8IZM0 81 aa5.28□□□□□ -1.56
CDC42SE2-212ENST00000515533 MPLKIPQ8TAP9 179 aa5.28□□□□□ -1.56
CDC42SE2-212ENST00000515533 ALKBH7Q9BT30 221 aaPredicted RBP5.28□□□□□ -1.56
CDC42SE2-212ENST00000515533 KRTAP2-2Q9BYT5 123 aa5.28□□□□□ -1.56
CDC42SE2-212ENST00000515533 VCX2Q9H322 139 aa5.28□□□□□ -1.56
CDC42SE2-212ENST00000515533 XAGE1AQ9HD64 81 aa5.28□□□□□ -1.56
CDC42SE2-212ENST00000515533 LAMTOR2Q9Y2Q5 125 aa5.28□□□□□ -1.56
CDC42SE2-212ENST00000515533 C22orf24Q9Y442 160 aa5.28□□□□□ -1.56
CDC42SE2-212ENST00000515533 RPL28P46779 137 aaKnown RBP5.27□□□□□ -1.57
CDC42SE2-212ENST00000515533 ORMDL2Q53FV1 153 aa5.27□□□□□ -1.57
CDC42SE2-212ENST00000515533 ZC2HC1BQ5TFG8 222 aa5.27□□□□□ -1.57
CDC42SE2-212ENST00000515533 FAT4Q6V0I7 4981 aa5.26□□□□□ -1.57
CDC42SE2-212ENST00000515533 F8VRH5 84 aa5.26□□□□□ -1.57
CDC42SE2-212ENST00000515533 HERVK_113P63121 156 aa5.26□□□□□ -1.57
CDC42SE2-212ENST00000515533 SEC11AP67812 179 aa5.26□□□□□ -1.57
CDC42SE2-212ENST00000515533 PAPPA-AS1Q5QFB9 102 aa5.26□□□□□ -1.57
CDC42SE2-212ENST00000515533 MRPL55Q7Z7F7 128 aaKnown RBP5.26□□□□□ -1.57
CDC42SE2-212ENST00000515533 Q8N8P6 123 aa5.26□□□□□ -1.57
CDC42SE2-212ENST00000515533 TYMSOSQ8TAI1 123 aa5.26□□□□□ -1.57
CDC42SE2-212ENST00000515533 AMELXQ99217 191 aa5.26□□□□□ -1.57
CDC42SE2-212ENST00000515533 GEMIN7Q9H840 131 aaKnown RBP5.26□□□□□ -1.57
CDC42SE2-212ENST00000515533 TP73-AS1Q9UF72 201 aa5.26□□□□□ -1.57
CDC42SE2-212ENST00000515533 A0A087X002 238 aa5.25□□□□□ -1.57
CDC42SE2-212ENST00000515533 K7EMI3 77 aa5.25□□□□□ -1.57
CDC42SE2-212ENST00000515533 CRYGAP11844 174 aa5.25□□□□□ -1.57
CDC42SE2-212ENST00000515533 CXCL5P42830 114 aa5.25□□□□□ -1.57
CDC42SE2-212ENST00000515533 LINC00173Q6ZV60 143 aa5.25□□□□□ -1.57
CDC42SE2-212ENST00000515533 BCE1O60756 84 aa5.24□□□□□ -1.57
CDC42SE2-212ENST00000515533 FAM19A3Q7Z5A8 133 aa5.24□□□□□ -1.57
CDC42SE2-212ENST00000515533 CDKN2A-AS1Q9UH64 79 aa5.24□□□□□ -1.57
CDC42SE2-212ENST00000515533 MUC17Q685J3 4493 aa5.23□□□□□ -1.57
CDC42SE2-212ENST00000515533 IGIPA6NJ69 53 aa5.23□□□□□ -1.57
CDC42SE2-212ENST00000515533 RPL37AP8A6NKH3 93 aa5.23□□□□□ -1.57
CDC42SE2-212ENST00000515533 G0S2P27469 103 aa5.23□□□□□ -1.57
CDC42SE2-212ENST00000515533 NXT2Q9NPJ8 142 aaKnown RBP5.23□□□□□ -1.57
CDC42SE2-212ENST00000515533 IGLV5-39A0A0G2JS06 123 aa5.22□□□□□ -1.57
CDC42SE2-212ENST00000515533 UBE2AP49459 152 aa5.22□□□□□ -1.57
CDC42SE2-212ENST00000515533 PNRC1Q12796 327 aaPredicted RBP5.22□□□□□ -1.57
CDC42SE2-212ENST00000515533 KRTAP5-1Q6L8H4 278 aa5.22□□□□□ -1.57
CDC42SE2-212ENST00000515533 NKAPP1Q8N9T2 125 aa5.22□□□□□ -1.57
CDC42SE2-212ENST00000515533 LINC00167Q96N53 147 aa5.22□□□□□ -1.57
CDC42SE2-212ENST00000515533 TIMM17AQ99595 171 aa5.22□□□□□ -1.57
CDC42SE2-212ENST00000515533 A0A1B0GVG6 124 aa5.21□□□□□ -1.58
CDC42SE2-212ENST00000515533 MT-ND4LP03901 98 aa5.21□□□□□ -1.58
CDC42SE2-212ENST00000515533 Q75L30 129 aa5.21□□□□□ -1.58
CDC42SE2-212ENST00000515533 COX7B2Q8TF08 81 aa5.21□□□□□ -1.58
CDC42SE2-212ENST00000515533 SMIM1B2RUZ4 78 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms