RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 TRGV2A0A075B6R0 118 aa8.81□□□□□ -1
SMAD1-215ENST00000515385 IGHV4-28A0A0C4DH34 117 aa8.81□□□□□ -1
SMAD1-215ENST00000515385 M0R2N4 97 aa8.81□□□□□ -1
SMAD1-215ENST00000515385 MRPL55Q7Z7F7 128 aaKnown RBP8.81□□□□□ -1
SMAD1-215ENST00000515385 MGAQ8IWI9 3026 aa8.81□□□□□ -1
SMAD1-215ENST00000515385 TRGV4A0A0C4DH28 118 aa8.81□□□□□ -1
SMAD1-215ENST00000515385 B4DSR2 109 aa8.81□□□□□ -1
SMAD1-215ENST00000515385 LRBAP50851 2863 aa8.8□□□□□ -1
SMAD1-215ENST00000515385 OTOGLQ3ZCN5 2332 aa8.8□□□□□ -1
SMAD1-215ENST00000515385 LOC100131303A0A0U1RQF7 123 aa8.8□□□□□ -1
SMAD1-215ENST00000515385 PRYO14603 147 aa8.8□□□□□ -1
SMAD1-215ENST00000515385 FUSP35637 526 aaKnown RBP eCLIP8.8□□□□□ -1
SMAD1-215ENST00000515385 ZNF843Q8N446 348 aa8.8□□□□□ -1
SMAD1-215ENST00000515385 SPATA3Q8NHX4 192 aa8.8□□□□□ -1
SMAD1-215ENST00000515385 MPLKIPQ8TAP9 179 aa8.8□□□□□ -1
SMAD1-215ENST00000515385 BSNQ9UPA5 3926 aa8.8□□□□□ -1
SMAD1-215ENST00000515385 COL6A6A6NMZ7 2263 aa8.8□□□□□ -1
SMAD1-215ENST00000515385 ACACAQ13085 2346 aa8.79□□□□□ -1
SMAD1-215ENST00000515385 A0A1B0GUV1 79 aa8.79□□□□□ -1
SMAD1-215ENST00000515385 GNLYP22749 145 aa8.79□□□□□ -1
SMAD1-215ENST00000515385 ZNF702PQ9H963 129 aa8.79□□□□□ -1
SMAD1-215ENST00000515385 PTPRQQ9UMZ3 2332 aa8.79□□□□□ -1
SMAD1-215ENST00000515385 SPTBN1Q01082 2364 aaKnown RBP8.79□□□□□ -1
SMAD1-215ENST00000515385 ODF3L2Q3SX64 289 aa8.79□□□□□ -1
SMAD1-215ENST00000515385 PLA2G2AP14555 144 aa8.78□□□□□ -1
SMAD1-215ENST00000515385 FAM229BQ4G0N7 80 aa8.78□□□□□ -1
SMAD1-215ENST00000515385 C4orf48Q5BLP8 95 aa8.78□□□□□ -1
SMAD1-215ENST00000515385 C4orf3Q8WVX3 66 aa8.78□□□□□ -1
SMAD1-215ENST00000515385 IGHV4-31P0DP07 118 aa8.77□□□□□ -1
SMAD1-215ENST00000515385 ZNF292O60281 2723 aa8.77□□□□□ -1.01
SMAD1-215ENST00000515385 KIAA0087Q14695 138 aa8.77□□□□□ -1.01
SMAD1-215ENST00000515385 Q1T7F1 81 aa8.77□□□□□ -1.01
SMAD1-215ENST00000515385 DEFB136Q30KP8 78 aa8.77□□□□□ -1.01
SMAD1-215ENST00000515385 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.77□□□□□ -1.01
SMAD1-215ENST00000515385 Q6ZQY7 126 aa8.76□□□□□ -1.01
SMAD1-215ENST00000515385 SORL1Q92673 2214 aa8.76□□□□□ -1.01
SMAD1-215ENST00000515385 IGLV6-57P01721 117 aa8.76□□□□□ -1.01
SMAD1-215ENST00000515385 CMC4P56277 68 aaPredicted RBP8.76□□□□□ -1.01
SMAD1-215ENST00000515385 DAD1P61803 113 aa8.76□□□□□ -1.01
SMAD1-215ENST00000515385 Q6ZTC4 211 aa8.76□□□□□ -1.01
SMAD1-215ENST00000515385 HRNRQ86YZ3 2850 aaPredicted RBP8.75□□□□□ -1.01
SMAD1-215ENST00000515385 IGHV4-30-2A0A087WSY4 118 aa8.75□□□□□ -1.01
SMAD1-215ENST00000515385 CCL24O00175 119 aa8.75□□□□□ -1.01
SMAD1-215ENST00000515385 CCL19Q99731 98 aa8.74□□□□□ -1.01
SMAD1-215ENST00000515385 OCR1Q9BZK8 76 aa8.74□□□□□ -1.01
SMAD1-215ENST00000515385 ABCA2Q9BZC7 2435 aa8.74□□□□□ -1.01
SMAD1-215ENST00000515385 ANKRD11Q6UB99 2663 aaPredicted RBP8.74□□□□□ -1.01
SMAD1-215ENST00000515385 CD164L2Q6UWJ8 174 aa8.74□□□□□ -1.01
SMAD1-215ENST00000515385 C18orf65Q6ZTR6 163 aa8.74□□□□□ -1.01
SMAD1-215ENST00000515385 COX7BP24311 80 aa8.73□□□□□ -1.01
SMAD1-215ENST00000515385 CACNA1AO00555 2505 aa8.73□□□□□ -1.01
SMAD1-215ENST00000515385 KHDC1LQ5JSQ8 128 aa8.73□□□□□ -1.01
SMAD1-215ENST00000515385 SCXQ7RTU7 201 aa8.73□□□□□ -1.01
SMAD1-215ENST00000515385 Q6YL49 198 aa8.71□□□□□ -1.01
SMAD1-215ENST00000515385 DIRC1Q969H9 104 aa8.71□□□□□ -1.01
SMAD1-215ENST00000515385 IGKV4-1P06312 121 aa8.71□□□□□ -1.02
SMAD1-215ENST00000515385 DSCR9P59020 149 aa8.71□□□□□ -1.02
SMAD1-215ENST00000515385 LYRM9A8MSI8 78 aa8.7□□□□□ -1.02
SMAD1-215ENST00000515385 Q8NDZ9 215 aa8.7□□□□□ -1.02
SMAD1-215ENST00000515385 LINC01356Q8N9X3 169 aa8.69□□□□□ -1.02
SMAD1-215ENST00000515385 DMXL1Q9Y485 3027 aa8.69□□□□□ -1.02
SMAD1-215ENST00000515385 KTN1-AS1Q86SY8 53 aa8.69□□□□□ -1.02
SMAD1-215ENST00000515385 NCOR2Q9Y618 2525 aa8.68□□□□□ -1.02
SMAD1-215ENST00000515385 hDV103S1A0JD37 113 aa8.68□□□□□ -1.02
SMAD1-215ENST00000515385 LINC00269Q8N2A0 174 aa8.68□□□□□ -1.02
SMAD1-215ENST00000515385 RBM12B-AS1Q9P1G2 102 aa8.68□□□□□ -1.02
SMAD1-215ENST00000515385 C19orf84I3L1E1 186 aa8.67□□□□□ -1.02
SMAD1-215ENST00000515385 GIG44P09565 113 aaPredicted RBP8.67□□□□□ -1.02
SMAD1-215ENST00000515385 C9orf116Q5BN46 136 aaPredicted RBP8.67□□□□□ -1.02
SMAD1-215ENST00000515385 BBC3Q96PG8 261 aaPredicted RBP8.67□□□□□ -1.02
SMAD1-215ENST00000515385 A0A0J9YWU9 116 aa8.66□□□□□ -1.02
SMAD1-215ENST00000515385 IGHV4-30-4P0DP06 118 aa8.66□□□□□ -1.02
SMAD1-215ENST00000515385 CHCHD10Q8WYQ3 142 aaPredicted RBP8.66□□□□□ -1.02
SMAD1-215ENST00000515385 ELOF1P60002 83 aaKnown RBP8.65□□□□□ -1.02
SMAD1-215ENST00000515385 HIGD2AQ9BW72 106 aa8.65□□□□□ -1.02
SMAD1-215ENST00000515385 SPTAN1Q13813 2472 aaKnown RBP8.65□□□□□ -1.03
SMAD1-215ENST00000515385 LCE6AA0A183 80 aa8.65□□□□□ -1.03
SMAD1-215ENST00000515385 GYPEP15421 78 aa8.65□□□□□ -1.03
SMAD1-215ENST00000515385 CLPSL2Q6UWE3 100 aa8.65□□□□□ -1.03
SMAD1-215ENST00000515385 ZNF73O43830 326 aaPredicted RBP8.64□□□□□ -1.03
SMAD1-215ENST00000515385 ESM1Q9NQ30 184 aa8.64□□□□□ -1.03
SMAD1-215ENST00000515385 CELA1Q9UNI1 258 aa8.64□□□□□ -1.03
SMAD1-215ENST00000515385 CSNK1G2-AS1Q8NCQ2 148 aa8.63□□□□□ -1.03
SMAD1-215ENST00000515385 ACACBO00763 2458 aa8.63□□□□□ -1.03
SMAD1-215ENST00000515385 AKAP13Q12802 2813 aa8.63□□□□□ -1.03
SMAD1-215ENST00000515385 GVQW2A0A096LPI5 108 aaPredicted RBP8.63□□□□□ -1.03
SMAD1-215ENST00000515385 A0A1B0GW54 56 aa8.63□□□□□ -1.03
SMAD1-215ENST00000515385 NDUFS5O43920 106 aa8.63□□□□□ -1.03
SMAD1-215ENST00000515385 FSHBP01225 129 aa8.63□□□□□ -1.03
SMAD1-215ENST00000515385 ATMQ13315 3056 aa8.63□□□□□ -1.03
SMAD1-215ENST00000515385 SVEP1Q4LDE5 3571 aa8.63□□□□□ -1.03
SMAD1-215ENST00000515385 Q6ZRP5 223 aa8.62□□□□□ -1.03
SMAD1-215ENST00000515385 LINC01006Q8NI28 216 aa8.62□□□□□ -1.03
SMAD1-215ENST00000515385 UBE2BP63146 152 aa8.61□□□□□ -1.03
SMAD1-215ENST00000515385 REG3AQ06141 175 aa8.61□□□□□ -1.03
SMAD1-215ENST00000515385 SPAG11BQ08648 103 aa8.61□□□□□ -1.03
SMAD1-215ENST00000515385 HIGD2BQ4VC39 106 aa8.61□□□□□ -1.03
SMAD1-215ENST00000515385 LINC00612Q8N6U2 182 aa8.61□□□□□ -1.03
SMAD1-215ENST00000515385 LINC00588Q9Y4M8 146 aa8.61□□□□□ -1.03
SMAD1-215ENST00000515385 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.61□□□□□ -1.037e-8■■■□□ 16.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms