RNA–Protein interactions for RNA: ENST00000515365.1

HERC6-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 638 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-208ENST00000515365 G3V318 75 aa2.43□□□□□ -2.02
HERC6-208ENST00000515365 K7EP34 96 aa2.43□□□□□ -2.02
HERC6-208ENST00000515365 NCR2O95944 276 aa2.43□□□□□ -2.02
HERC6-208ENST00000515365 TRGV3P03979 118 aa2.43□□□□□ -2.02
HERC6-208ENST00000515365 APELAP0DMC3 54 aa2.43□□□□□ -2.02
HERC6-208ENST00000515365 SCGB1A1P11684 91 aa2.43□□□□□ -2.02
HERC6-208ENST00000515365 FABP2P12104 132 aa2.43□□□□□ -2.02
HERC6-208ENST00000515365 RNASE3P12724 160 aaKnown RBP2.43□□□□□ -2.02
HERC6-208ENST00000515365 CD24P25063 80 aa2.43□□□□□ -2.02
HERC6-208ENST00000515365 PSMB2P49721 201 aa2.43□□□□□ -2.02
HERC6-208ENST00000515365 SNRPD3P62318 126 aaKnown RBP2.43□□□□□ -2.02
HERC6-208ENST00000515365 AMMECR1LQ6DCA0 310 aa2.43□□□□□ -2.02
HERC6-208ENST00000515365 ATOH7Q8N100 152 aa2.43□□□□□ -2.02
HERC6-208ENST00000515365 AP1S3Q96PC3 154 aa2.43□□□□□ -2.02
HERC6-208ENST00000515365 RHPN1-AS1Q9BWJ2 59 aa2.43□□□□□ -2.02
HERC6-208ENST00000515365 PHLDA3Q9Y5J5 127 aa2.43□□□□□ -2.02
HERC6-208ENST00000515365 YLPM1P49750 1951 aaKnown RBP2.43□□□□□ -2.02
HERC6-208ENST00000515365 MYCBP2O75592 4640 aa2.43□□□□□ -2.02
HERC6-208ENST00000515365 HUWE1Q7Z6Z7 4374 aaKnown RBP2.42□□□□□ -2.02
HERC6-208ENST00000515365 STARD9Q9P2P6 4700 aa2.42□□□□□ -2.02
HERC6-208ENST00000515365 TRBV7-3A0A075B6L6 115 aa2.42□□□□□ -2.02
HERC6-208ENST00000515365 TRAV40A0A0B4J280 105 aa2.42□□□□□ -2.02
HERC6-208ENST00000515365 LOC389332A0A1B0GUA5 103 aa2.42□□□□□ -2.02
HERC6-208ENST00000515365 J3QR89 54 aa2.42□□□□□ -2.02
HERC6-208ENST00000515365 LY6HO94772 140 aa2.42□□□□□ -2.02
HERC6-208ENST00000515365 CRYGDP07320 174 aa2.42□□□□□ -2.02
HERC6-208ENST00000515365 S100A4P26447 101 aaKnown RBP2.42□□□□□ -2.02
HERC6-208ENST00000515365 RNASE4P34096 147 aaKnown RBP2.42□□□□□ -2.02
HERC6-208ENST00000515365 UBE2D1P51668 147 aa2.42□□□□□ -2.02
HERC6-208ENST00000515365 KRTAP12-2P59991 146 aa2.42□□□□□ -2.02
HERC6-208ENST00000515365 PMVKQ15126 192 aa2.42□□□□□ -2.02
HERC6-208ENST00000515365 BATFQ16520 125 aa2.42□□□□□ -2.02
HERC6-208ENST00000515365 LYRM7Q5U5X0 104 aa2.42□□□□□ -2.02
HERC6-208ENST00000515365 SLC25A29Q8N8R3 303 aa2.42□□□□□ -2.02
HERC6-208ENST00000515365 DNAJC30Q96LL9 226 aa2.42□□□□□ -2.02
HERC6-208ENST00000515365 SCGB3A1Q96QR1 104 aa2.42□□□□□ -2.02
HERC6-208ENST00000515365 TIMM21Q9BVV7 248 aa2.42□□□□□ -2.02
HERC6-208ENST00000515365 MRPL35Q9NZE8 188 aaKnown RBP2.42□□□□□ -2.02
HERC6-208ENST00000515365 CYSLTR1Q9Y271 337 aa2.42□□□□□ -2.02
HERC6-208ENST00000515365 DNAH9Q9NYC9 4486 aa2.42□□□□□ -2.02
HERC6-208ENST00000515365 PLXNB1O43157 2135 aa2.42□□□□□ -2.02
HERC6-208ENST00000515365 FAT2Q9NYQ8 4349 aa2.41□□□□□ -2.02
HERC6-208ENST00000515365 IGLV4-60A0A075B6I1 120 aa2.41□□□□□ -2.02
HERC6-208ENST00000515365 TRAV26-2A0A0B4J265 109 aa2.41□□□□□ -2.02
HERC6-208ENST00000515365 SDHAF1A6NFY7 115 aa2.41□□□□□ -2.02
HERC6-208ENST00000515365 A8MWV9 139 aa2.41□□□□□ -2.02
HERC6-208ENST00000515365 OR11H12B2RN74 326 aa2.41□□□□□ -2.02
HERC6-208ENST00000515365 C3orf84H3BNL1 204 aa2.41□□□□□ -2.02
HERC6-208ENST00000515365 M0QY20 66 aa2.41□□□□□ -2.02
HERC6-208ENST00000515365 TIMM17BO60830 172 aa2.41□□□□□ -2.02
HERC6-208ENST00000515365 LGALS1P09382 135 aaKnown RBP2.41□□□□□ -2.02
HERC6-208ENST00000515365 HLA-DMBP28068 263 aa2.41□□□□□ -2.02
HERC6-208ENST00000515365 BLCAPP62952 87 aa2.41□□□□□ -2.02
HERC6-208ENST00000515365 C12orf74Q32Q52 190 aa2.41□□□□□ -2.02
HERC6-208ENST00000515365 AMTNQ6UX39 209 aa2.41□□□□□ -2.02
HERC6-208ENST00000515365 UNQ9165/PRO28630Q6UXU0 137 aa2.41□□□□□ -2.02
HERC6-208ENST00000515365 FAM19A3Q7Z5A8 133 aa2.41□□□□□ -2.02
HERC6-208ENST00000515365 SBSPONQ8IVN8 264 aa2.41□□□□□ -2.02
HERC6-208ENST00000515365 RNF182Q8N6D2 247 aa2.41□□□□□ -2.02
HERC6-208ENST00000515365 LINC00337Q8N6G1 96 aa2.41□□□□□ -2.02
HERC6-208ENST00000515365 OR11H1Q8NG94 326 aa2.41□□□□□ -2.02
HERC6-208ENST00000515365 OR11H2Q8NH07 326 aa2.41□□□□□ -2.02
HERC6-208ENST00000515365 ATP6V0E2Q8NHE4 81 aa2.41□□□□□ -2.02
HERC6-208ENST00000515365 Q8TAT8 98 aa2.41□□□□□ -2.02
HERC6-208ENST00000515365 CCL19Q99731 98 aa2.41□□□□□ -2.02
HERC6-208ENST00000515365 SPANXDQ9BXN6 97 aa2.41□□□□□ -2.02
HERC6-208ENST00000515365 SPANXA1Q9NS26 97 aa2.41□□□□□ -2.02
HERC6-208ENST00000515365 PRO0628Q9UI54 55 aa2.41□□□□□ -2.02
HERC6-208ENST00000515365 GPR98Q8WXG9 6306 aa2.41□□□□□ -2.02
HERC6-208ENST00000515365 SSPOA2VEC9 5147 aa2.4□□□□□ -2.02
HERC6-208ENST00000515365 TMSB15BA0A087X1C1 80 aa2.4□□□□□ -2.03
HERC6-208ENST00000515365 IGKV2D-26A0A0A0MRZ7 120 aa2.4□□□□□ -2.03
HERC6-208ENST00000515365 TRBV10-1A0A0K0K1A3 114 aa2.4□□□□□ -2.03
HERC6-208ENST00000515365 IGLL5B9A064 214 aa2.4□□□□□ -2.03
HERC6-208ENST00000515365 H3BMG7 143 aa2.4□□□□□ -2.03
HERC6-208ENST00000515365 H3BUX3 64 aa2.4□□□□□ -2.03
HERC6-208ENST00000515365 I3L3M4 83 aa2.4□□□□□ -2.03
HERC6-208ENST00000515365 CD7P09564 240 aa2.4□□□□□ -2.03
HERC6-208ENST00000515365 AZU1P20160 251 aa2.4□□□□□ -2.03
HERC6-208ENST00000515365 UBE2D3P61077 147 aa2.4□□□□□ -2.03
HERC6-208ENST00000515365 UBE2D2P62837 147 aa2.4□□□□□ -2.03
HERC6-208ENST00000515365 MRPS36P82909 103 aaKnown RBP2.4□□□□□ -2.03
HERC6-208ENST00000515365 SMAGPQ0VAQ4 97 aa2.4□□□□□ -2.03
HERC6-208ENST00000515365 RRN3P1Q2M238 152 aa2.4□□□□□ -2.03
HERC6-208ENST00000515365 FAM222AQ5U5X8 452 aa2.4□□□□□ -2.03
HERC6-208ENST00000515365 SPANXA2-OT1Q8N9U9 137 aa2.4□□□□□ -2.03
HERC6-208ENST00000515365 PLEKHB2Q96CS7 222 aa2.4□□□□□ -2.03
HERC6-208ENST00000515365 AMELXQ99217 191 aa2.4□□□□□ -2.03
HERC6-208ENST00000515365 VPREB3Q9UKI3 123 aa2.4□□□□□ -2.03
HERC6-208ENST00000515365 S4R3C0 116 aa2.4□□□□□ -2.03
HERC6-208ENST00000515365 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.39□□□□□ -2.03
HERC6-208ENST00000515365 TRAV4A0A0B4J268 109 aa2.39□□□□□ -2.03
HERC6-208ENST00000515365 A0A0B4J2C4 111 aa2.39□□□□□ -2.03
HERC6-208ENST00000515365 A0A0J9YY99 117 aa2.39□□□□□ -2.03
HERC6-208ENST00000515365 H3BMM0 161 aa2.39□□□□□ -2.03
HERC6-208ENST00000515365 H3BUT2 72 aa2.39□□□□□ -2.03
HERC6-208ENST00000515365 H3BVH4 76 aa2.39□□□□□ -2.03
HERC6-208ENST00000515365 M0R2P5 195 aa2.39□□□□□ -2.03
HERC6-208ENST00000515365 LEPROTO15243 131 aa2.39□□□□□ -2.03
HERC6-208ENST00000515365 GNRH2O43555 120 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 213.6 ms