RNA–Protein interactions for RNA: ENST00000514934.1

SGCA-211, Transcript of sarcoglycan alpha, humanhuman

TSL 4

Gene SGCA, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-211ENST00000514934 C6orf48Q9UBA6 75 aa9.03□□□□□ -0.96
SGCA-211ENST00000514934 LOC389332A0A1B0GUA5 103 aa9.02□□□□□ -0.97
SGCA-211ENST00000514934 TLX1NBP0CAT3 122 aa9.02□□□□□ -0.97
SGCA-211ENST00000514934 ODF1Q14990 250 aa9.02□□□□□ -0.97
SGCA-211ENST00000514934 C9orf116Q5BN46 136 aaPredicted RBP9.02□□□□□ -0.97
SGCA-211ENST00000514934 PDZD11Q5EBL8 140 aa9.02□□□□□ -0.97
SGCA-211ENST00000514934 UNQ6190/PRO20217Q6UXQ8 127 aa9.02□□□□□ -0.97
SGCA-211ENST00000514934 KRTAP11-1Q8IUC1 163 aa9.02□□□□□ -0.97
SGCA-211ENST00000514934 MAP1LC3AQ9H492 121 aa9.02□□□□□ -0.97
SGCA-211ENST00000514934 F8WDY8 70 aa9.01□□□□□ -0.97
SGCA-211ENST00000514934 IFI27P40305 119 aaPredicted RBP9.01□□□□□ -0.97
SGCA-211ENST00000514934 JOSD1Q15040 202 aaPredicted RBP9.01□□□□□ -0.97
SGCA-211ENST00000514934 FAM19A3Q7Z5A8 133 aa9.01□□□□□ -0.97
SGCA-211ENST00000514934 TMEM141Q96I45 108 aa9.01□□□□□ -0.97
SGCA-211ENST00000514934 ALKBH7Q9BT30 221 aaPredicted RBP9.01□□□□□ -0.97
SGCA-211ENST00000514934 KRTAP10-8P60410 259 aa9□□□□□ -0.97
SGCA-211ENST00000514934 CTAG1AP78358 180 aa9□□□□□ -0.97
SGCA-211ENST00000514934 C2orf66Q6UXQ4 117 aa9□□□□□ -0.97
SGCA-211ENST00000514934 Q6ZRP5 223 aa9□□□□□ -0.97
SGCA-211ENST00000514934 BAGE3Q86Y29 109 aa9□□□□□ -0.97
SGCA-211ENST00000514934 PLA2G2DQ9UNK4 145 aa9□□□□□ -0.97
SGCA-211ENST00000514934 FAM168BA1KXE4 195 aa8.99□□□□□ -0.97
SGCA-211ENST00000514934 SPINK6Q6UWN8 80 aa8.99□□□□□ -0.97
SGCA-211ENST00000514934 CHCHD1Q96BP2 118 aaKnown RBP8.99□□□□□ -0.97
SGCA-211ENST00000514934 PSORS1C2Q9UIG4 136 aa8.99□□□□□ -0.97
SGCA-211ENST00000514934 K7EMI3 77 aa8.98□□□□□ -0.97
SGCA-211ENST00000514934 NDUFA1O15239 70 aa8.98□□□□□ -0.97
SGCA-211ENST00000514934 NPSP0C0P6 89 aa8.98□□□□□ -0.97
SGCA-211ENST00000514934 RPL18AQ02543 176 aaKnown RBP8.98□□□□□ -0.97
SGCA-211ENST00000514934 PHF5AQ7RTV0 110 aaKnown RBP8.98□□□□□ -0.97
SGCA-211ENST00000514934 LINC01561Q8N1V8 128 aa8.98□□□□□ -0.97
SGCA-211ENST00000514934 CYSLTR1Q9Y271 337 aa8.98□□□□□ -0.97
SGCA-211ENST00000514934 LINC01546A6NGU7 62 aa8.97□□□□□ -0.97
SGCA-211ENST00000514934 C2orf82Q6UX34 121 aa8.97□□□□□ -0.97
SGCA-211ENST00000514934 C18orf32Q8TCD1 76 aa8.97□□□□□ -0.97
SGCA-211ENST00000514934 LINC00587B1AMM8 73 aa8.96□□□□□ -0.98
SGCA-211ENST00000514934 TSTD3H0UI37 97 aa8.96□□□□□ -0.98
SGCA-211ENST00000514934 KIAA1644Q3SXP7 199 aa8.96□□□□□ -0.98
SGCA-211ENST00000514934 ORMDL2Q53FV1 153 aa8.96□□□□□ -0.98
SGCA-211ENST00000514934 TEX43Q6ZNM6 134 aa8.96□□□□□ -0.98
SGCA-211ENST00000514934 NXT2Q9NPJ8 142 aaKnown RBP8.95□□□□□ -0.98
SGCA-211ENST00000514934 RNF213Q63HN8 5207 aa8.95□□□□□ -0.98
SGCA-211ENST00000514934 TRBV30A0A0K0K1B3 111 aa8.94□□□□□ -0.98
SGCA-211ENST00000514934 C9orf129Q5T035 196 aaKnown RBP8.94□□□□□ -0.98
SGCA-211ENST00000514934 TOMM6Q96B49 74 aa8.94□□□□□ -0.98
SGCA-211ENST00000514934 TIMM17AQ99595 171 aa8.94□□□□□ -0.98
SGCA-211ENST00000514934 LINC00614P0C842 121 aa8.93□□□□□ -0.98
SGCA-211ENST00000514934 LINC01549A6NIU2 74 aa8.92□□□□□ -0.98
SGCA-211ENST00000514934 SERF1AO75920 110 aa8.92□□□□□ -0.98
SGCA-211ENST00000514934 C2orf88Q9BSF0 95 aa8.92□□□□□ -0.98
SGCA-211ENST00000514934 VCX2Q9H322 139 aa8.92□□□□□ -0.98
SGCA-211ENST00000514934 CDKN2A-AS1Q9UH64 79 aa8.92□□□□□ -0.98
SGCA-211ENST00000514934 NDUFC2-KCTD14E9PQ53 114 aa8.91□□□□□ -0.98
SGCA-211ENST00000514934 HSBP1O75506 76 aa8.91□□□□□ -0.98
SGCA-211ENST00000514934 IGLV5-45A0A087WSX0 123 aa8.9□□□□□ -0.98
SGCA-211ENST00000514934 G0S2P27469 103 aa8.9□□□□□ -0.98
SGCA-211ENST00000514934 GAGE2EQ4V326 116 aa8.9□□□□□ -0.98
SGCA-211ENST00000514934 REG3GQ6UW15 175 aa8.9□□□□□ -0.98
SGCA-211ENST00000514934 Q6ZN92 141 aa8.9□□□□□ -0.98
SGCA-211ENST00000514934 Q8IZM0 81 aa8.9□□□□□ -0.98
SGCA-211ENST00000514934 GAGE2DQ9UEU5 116 aa8.9□□□□□ -0.98
SGCA-211ENST00000514934 LPAP08519 4548 aa8.9□□□□□ -0.99
SGCA-211ENST00000514934 IGLV7-43P04211 117 aa8.89□□□□□ -0.99
SGCA-211ENST00000514934 LINC00310P59036 64 aa8.89□□□□□ -0.99
SGCA-211ENST00000514934 C1orf137Q5JT78 98 aa8.89□□□□□ -0.99
SGCA-211ENST00000514934 FA2HQ7L5A8 372 aa8.89□□□□□ -0.99
SGCA-211ENST00000514934 FAM19A5Q7Z5A7 132 aaPredicted RBP8.89□□□□□ -0.99
SGCA-211ENST00000514934 A0A096LNJ9 63 aa8.88□□□□□ -0.99
SGCA-211ENST00000514934 SCGB1D1O95968 90 aa8.88□□□□□ -0.99
SGCA-211ENST00000514934 DDTP30046 118 aa8.88□□□□□ -0.99
SGCA-211ENST00000514934 ERASQ7Z444 233 aa8.88□□□□□ -0.99
SGCA-211ENST00000514934 URB1-AS1Q96HZ7 61 aa8.88□□□□□ -0.99
SGCA-211ENST00000514934 SMIM1B2RUZ4 78 aa8.87□□□□□ -0.99
SGCA-211ENST00000514934 NUPR1O60356 82 aa8.87□□□□□ -0.99
SGCA-211ENST00000514934 HERVK_113P63121 156 aa8.87□□□□□ -0.99
SGCA-211ENST00000514934 HSPB8Q9UJY1 196 aa8.87□□□□□ -0.99
SGCA-211ENST00000514934 M0QXV9 152 aa8.86□□□□□ -0.99
SGCA-211ENST00000514934 KRTAP1-4P0C5Y4 121 aa8.86□□□□□ -0.99
SGCA-211ENST00000514934 LBHQ53QV2 105 aaPredicted RBP8.86□□□□□ -0.99
SGCA-211ENST00000514934 TINCRA0A1B0GVN0 87 aa8.84□□□□□ -0.99
SGCA-211ENST00000514934 SEC11AP67812 179 aa8.84□□□□□ -0.99
SGCA-211ENST00000514934 PAPPA-AS1Q5QFB9 102 aa8.84□□□□□ -0.99
SGCA-211ENST00000514934 SCGB3A1Q96QR1 104 aa8.84□□□□□ -0.99
SGCA-211ENST00000514934 PRO1933Q9H354 126 aa8.84□□□□□ -0.99
SGCA-211ENST00000514934 CST9LQ9H4G1 147 aa8.84□□□□□ -0.99
SGCA-211ENST00000514934 TOMM7Q9P0U1 55 aa8.84□□□□□ -0.99
SGCA-211ENST00000514934 F8VRH5 84 aa8.83□□□□□ -1
SGCA-211ENST00000514934 H0Y9J4 135 aa8.83□□□□□ -1
SGCA-211ENST00000514934 LEPROTL1O95214 131 aa8.83□□□□□ -1
SGCA-211ENST00000514934 LINC00469Q8N7U9 141 aa8.83□□□□□ -1
SGCA-211ENST00000514934 HBDP02042 147 aa8.82□□□□□ -1
SGCA-211ENST00000514934 PMCHL1Q16048 86 aa8.82□□□□□ -1
SGCA-211ENST00000514934 C6orf226Q5I0X4 101 aa8.82□□□□□ -1
SGCA-211ENST00000514934 C14orf144Q96I85 54 aa8.82□□□□□ -1
SGCA-211ENST00000514934 GEMIN7Q9H840 131 aaKnown RBP8.82□□□□□ -1
SGCA-211ENST00000514934 XAGE1AQ9HD64 81 aa8.82□□□□□ -1
SGCA-211ENST00000514934 PRSS2P07478 247 aa8.81□□□□□ -1
SGCA-211ENST00000514934 CKS1BP61024 79 aa8.81□□□□□ -1
SGCA-211ENST00000514934 PET117Q6UWS5 81 aa8.81□□□□□ -1
SGCA-211ENST00000514934 DIRC1Q969H9 104 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms