RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 DPH3P1Q9H4G8 78 aa-0.37□□□□□ -2.47
NEDD4-211ENST00000514893 CNOT1A5YKK6 2376 aaKnown RBP-0.37□□□□□ -2.47
NEDD4-211ENST00000514893 URB1O60287 2271 aaKnown RBP-0.38□□□□□ -2.47
NEDD4-211ENST00000514893 SETD2Q9BYW2 2564 aaPredicted RBP-0.38□□□□□ -2.47
NEDD4-211ENST00000514893 GOLGA4Q13439 2230 aaKnown RBP-0.38□□□□□ -2.47
NEDD4-211ENST00000514893 CREBBPQ92793 2442 aa-0.38□□□□□ -2.47
NEDD4-211ENST00000514893 A0A1B0GU69 56 aa-0.38□□□□□ -2.47
NEDD4-211ENST00000514893 A0A1B0GV90 55 aa-0.38□□□□□ -2.47
NEDD4-211ENST00000514893 PPP3R1P63098 170 aa-0.38□□□□□ -2.47
NEDD4-211ENST00000514893 DEFB135Q30KP9 77 aa-0.38□□□□□ -2.47
NEDD4-211ENST00000514893 SPRR4Q96PI1 79 aa-0.38□□□□□ -2.47
NEDD4-211ENST00000514893 CRIPTQ9P021 101 aa-0.38□□□□□ -2.47
NEDD4-211ENST00000514893 A0A0G2JMZ2 1700 aa-0.38□□□□□ -2.47
NEDD4-211ENST00000514893 NF1P21359 2839 aa-0.39□□□□□ -2.47
NEDD4-211ENST00000514893 NRKQ7Z2Y5 1582 aa-0.39□□□□□ -2.47
NEDD4-211ENST00000514893 ADGRL2O95490 1459 aa-0.39□□□□□ -2.47
NEDD4-211ENST00000514893 PLEKHH2Q8IVE3 1493 aa-0.39□□□□□ -2.47
NEDD4-211ENST00000514893 GNG4P50150 75 aa-0.39□□□□□ -2.47
NEDD4-211ENST00000514893 UBE2D3P61077 147 aa-0.39□□□□□ -2.47
NEDD4-211ENST00000514893 UBE2D2P62837 147 aa-0.39□□□□□ -2.47
NEDD4-211ENST00000514893 VAMP8Q9BV40 100 aa-0.39□□□□□ -2.47
NEDD4-211ENST00000514893 ARHGAP5Q13017 1502 aa-0.39□□□□□ -2.47
NEDD4-211ENST00000514893 PRKDCP78527 4128 aaKnown RBP-0.4□□□□□ -2.47
NEDD4-211ENST00000514893 EIF4G3O43432 1585 aaKnown RBP-0.4□□□□□ -2.47
NEDD4-211ENST00000514893 CCDC141Q6ZP82 1450 aa-0.4□□□□□ -2.47
NEDD4-211ENST00000514893 I3L3M4 83 aa-0.4□□□□□ -2.47
NEDD4-211ENST00000514893 SAA2P0DJI9 122 aaPredicted RBP-0.4□□□□□ -2.47
NEDD4-211ENST00000514893 ASIPP42127 132 aa-0.4□□□□□ -2.47
NEDD4-211ENST00000514893 GNGT1P63211 74 aa-0.4□□□□□ -2.47
NEDD4-211ENST00000514893 HSD52Q0P140 79 aa-0.4□□□□□ -2.47
NEDD4-211ENST00000514893 GTF2H5Q6ZYL4 71 aa-0.4□□□□□ -2.47
NEDD4-211ENST00000514893 C6orf201Q7Z4U5 140 aa-0.4□□□□□ -2.47
NEDD4-211ENST00000514893 DEFB107AQ8IZN7 70 aa-0.4□□□□□ -2.47
NEDD4-211ENST00000514893 GNG8Q9UK08 70 aa-0.4□□□□□ -2.47
NEDD4-211ENST00000514893 DIP2CQ9Y2E4 1556 aa-0.4□□□□□ -2.47
NEDD4-211ENST00000514893 DNAJC13O75165 2243 aa-0.41□□□□□ -2.47
NEDD4-211ENST00000514893 PAPPA2Q9BXP8 1791 aa-0.41□□□□□ -2.47
NEDD4-211ENST00000514893 KRTDAPP60985 99 aa-0.41□□□□□ -2.48
NEDD4-211ENST00000514893 KRTAP19-8Q3LI54 63 aa-0.41□□□□□ -2.48
NEDD4-211ENST00000514893 H1FX-AS1Q4G0G2 97 aa-0.41□□□□□ -2.48
NEDD4-211ENST00000514893 HEPN1Q6WQI6 88 aa-0.41□□□□□ -2.48
NEDD4-211ENST00000514893 KNDC1Q76NI1 1749 aa-0.41□□□□□ -2.48
NEDD4-211ENST00000514893 MARF1Q9Y4F3 1742 aaKnown RBP-0.41□□□□□ -2.48
NEDD4-211ENST00000514893 PKHD1P08F94 4074 aa-0.42□□□□□ -2.48
NEDD4-211ENST00000514893 TOPAZ1Q8N9V7 1692 aa-0.42□□□□□ -2.48
NEDD4-211ENST00000514893 A0A0G2JND7 137 aa-0.42□□□□□ -2.48
NEDD4-211ENST00000514893 C7orf77A4D0Y5 90 aa-0.42□□□□□ -2.48
NEDD4-211ENST00000514893 H3BQF6 201 aa-0.42□□□□□ -2.48
NEDD4-211ENST00000514893 DLEU1O43261 78 aa-0.42□□□□□ -2.48
NEDD4-211ENST00000514893 TMEM203Q969S6 136 aa-0.42□□□□□ -2.48
NEDD4-211ENST00000514893 FLGP20930 4061 aaPredicted RBP-0.42□□□□□ -2.48
NEDD4-211ENST00000514893 PZPP20742 1482 aa-0.42□□□□□ -2.48
NEDD4-211ENST00000514893 MXRA5Q9NR99 2828 aa-0.42□□□□□ -2.48
NEDD4-211ENST00000514893 PDCD11Q14690 1871 aaKnown RBP-0.43□□□□□ -2.48
NEDD4-211ENST00000514893 TRAV30A0A087WSZ9 112 aa-0.43□□□□□ -2.48
NEDD4-211ENST00000514893 TMEM262E9PQX1 116 aa-0.43□□□□□ -2.48
NEDD4-211ENST00000514893 PSMG4Q5JS54 123 aa-0.43□□□□□ -2.48
NEDD4-211ENST00000514893 IER3IP1Q9Y5U9 82 aa-0.43□□□□□ -2.48
NEDD4-211ENST00000514893 CHD1O14646 1710 aa-0.44□□□□□ -2.48
NEDD4-211ENST00000514893 SPHKAPQ2M3C7 1700 aa-0.44□□□□□ -2.48
NEDD4-211ENST00000514893 hADV29S1A0JD25 119 aa-0.44□□□□□ -2.48
NEDD4-211ENST00000514893 H0Y9P7 68 aa-0.44□□□□□ -2.48
NEDD4-211ENST00000514893 CORTO00230 105 aa-0.44□□□□□ -2.48
NEDD4-211ENST00000514893 CGREF1Q99674 301 aa-0.44□□□□□ -2.48
NEDD4-211ENST00000514893 NKTRP30414 1462 aaKnown RBP-0.44□□□□□ -2.48
NEDD4-211ENST00000514893 CUX1P39880 1505 aa-0.44□□□□□ -2.48
NEDD4-211ENST00000514893 ABCA3Q99758 1704 aa-0.44□□□□□ -2.48
NEDD4-211ENST00000514893 PCNX1Q96RV3 2341 aa-0.44□□□□□ -2.48
NEDD4-211ENST00000514893 GNGT2O14610 69 aa-0.45□□□□□ -2.48
NEDD4-211ENST00000514893 DEFB112Q30KQ8 113 aa-0.45□□□□□ -2.48
NEDD4-211ENST00000514893 AKAP13Q12802 2813 aa-0.45□□□□□ -2.48
NEDD4-211ENST00000514893 COL14A1Q05707 1796 aaKnown RBP-0.45□□□□□ -2.48
NEDD4-211ENST00000514893 SPTBN4Q9H254 2564 aa-0.46□□□□□ -2.48
NEDD4-211ENST00000514893 EDC4Q6P2E9 1401 aaKnown RBP-0.46□□□□□ -2.48
NEDD4-211ENST00000514893 MON2Q7Z3U7 1717 aa-0.46□□□□□ -2.48
NEDD4-211ENST00000514893 LRP1BQ9NZR2 4599 aa-0.46□□□□□ -2.48
NEDD4-211ENST00000514893 MAPKBP1O60336 1514 aa-0.46□□□□□ -2.48
NEDD4-211ENST00000514893 SPTY2D1-AS1A0A0U1RR47 76 aa-0.46□□□□□ -2.48
NEDD4-211ENST00000514893 EFCAB10A6NFE3 127 aa-0.46□□□□□ -2.48
NEDD4-211ENST00000514893 UQCRHP07919 91 aa-0.46□□□□□ -2.48
NEDD4-211ENST00000514893 MRPS10P82664 201 aaKnown RBP-0.46□□□□□ -2.48
NEDD4-211ENST00000514893 PMCHL1Q16048 86 aa-0.46□□□□□ -2.48
NEDD4-211ENST00000514893 LINC00846Q9NV44 126 aa-0.46□□□□□ -2.48
NEDD4-211ENST00000514893 CACFD1Q9UGQ2 172 aa-0.46□□□□□ -2.48
NEDD4-211ENST00000514893 TARBP1Q13395 1621 aaKnown RBP-0.46□□□□□ -2.48
NEDD4-211ENST00000514893 SVEP1Q4LDE5 3571 aa-0.46□□□□□ -2.48
NEDD4-211ENST00000514893 TMEM218A2RU14 115 aa-0.47□□□□□ -2.48
NEDD4-211ENST00000514893 H0YGG7 62 aa-0.47□□□□□ -2.48
NEDD4-211ENST00000514893 KRTAP6-2Q3LI66 62 aa-0.47□□□□□ -2.48
NEDD4-211ENST00000514893 C9orf62Q8N4C0 152 aa-0.47□□□□□ -2.48
NEDD4-211ENST00000514893 AP4S1Q9Y587 144 aa-0.47□□□□□ -2.48
NEDD4-211ENST00000514893 C5P01031 1676 aa-0.47□□□□□ -2.48
NEDD4-211ENST00000514893 LRRC37AA6NMS7 1700 aa-0.47□□□□□ -2.49
NEDD4-211ENST00000514893 PRRC2CQ9Y520 2896 aaKnown RBP-0.47□□□□□ -2.49
NEDD4-211ENST00000514893 MRC2Q9UBG0 1479 aa-0.48□□□□□ -2.49
NEDD4-211ENST00000514893 H3BQ15 152 aa-0.48□□□□□ -2.49
NEDD4-211ENST00000514893 ARMS2P0C7Q2 107 aa-0.48□□□□□ -2.49
NEDD4-211ENST00000514893 SPRR2AP35326 72 aa-0.48□□□□□ -2.49
NEDD4-211ENST00000514893 MRPL34Q9BQ48 92 aaKnown RBP-0.48□□□□□ -2.49
NEDD4-211ENST00000514893 PMCHL2Q9BQD1 86 aa-0.48□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms