RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 TRGV4A0A0C4DH28 118 aa8.89□□□□□ -0.99
SDHA-216ENST00000514027 C19orf73Q9NVV2 129 aa8.89□□□□□ -0.99
SDHA-216ENST00000514027 SMR3AQ99954 134 aa8.89□□□□□ -0.99
SDHA-216ENST00000514027 TMEM243Q9BU79 118 aa8.89□□□□□ -0.99
SDHA-216ENST00000514027 C2CD3Q4AC94 2353 aa8.88□□□□□ -0.99
SDHA-216ENST00000514027 SMIM1B2RUZ4 78 aa8.88□□□□□ -0.99
SDHA-216ENST00000514027 CIRBPQ14011 172 aaKnown RBP8.88□□□□□ -0.99
SDHA-216ENST00000514027 CDC42SE2Q9NRR3 84 aa8.88□□□□□ -0.99
SDHA-216ENST00000514027 IGKV3OR2-268A0A0C4DH90 116 aa8.88□□□□□ -0.99
SDHA-216ENST00000514027 INAFM2P0DMQ5 153 aa8.88□□□□□ -0.99
SDHA-216ENST00000514027 HILS1P60008 231 aa8.88□□□□□ -0.99
SDHA-216ENST00000514027 NDUFC2-KCTD14E9PQ53 114 aa8.87□□□□□ -0.99
SDHA-216ENST00000514027 COX7A2LO14548 114 aa8.87□□□□□ -0.99
SDHA-216ENST00000514027 TIMM17BO60830 172 aa8.87□□□□□ -0.99
SDHA-216ENST00000514027 FHL2Q14192 279 aa8.87□□□□□ -0.99
SDHA-216ENST00000514027 PKIGQ9Y2B9 76 aa8.87□□□□□ -0.99
SDHA-216ENST00000514027 IGLV5-39A0A0G2JS06 123 aa8.86□□□□□ -0.99
SDHA-216ENST00000514027 PRIMA1Q86XR5 153 aa8.86□□□□□ -0.99
SDHA-216ENST00000514027 CSNK1G2-AS1Q8NCQ2 148 aa8.86□□□□□ -0.99
SDHA-216ENST00000514027 GCN1Q92616 2671 aaKnown RBP8.86□□□□□ -0.99
SDHA-216ENST00000514027 USP17L23D6RBM5 183 aa8.86□□□□□ -0.99
SDHA-216ENST00000514027 C22orf24Q9Y442 160 aa8.86□□□□□ -0.99
SDHA-216ENST00000514027 FAM222AQ5U5X8 452 aa8.85□□□□□ -0.99
SDHA-216ENST00000514027 A0A087WVE0 104 aa8.85□□□□□ -0.99
SDHA-216ENST00000514027 TRBV6-4A0A1B0GX49 114 aa8.85□□□□□ -0.99
SDHA-216ENST00000514027 EPM2AB3EWF7 344 aa8.85□□□□□ -0.99
SDHA-216ENST00000514027 Q6JHZ5 121 aa8.85□□□□□ -0.99
SDHA-216ENST00000514027 LINC00308Q8TCZ7 52 aa8.85□□□□□ -0.99
SDHA-216ENST00000514027 NDUFC2O95298 119 aa8.84□□□□□ -0.99
SDHA-216ENST00000514027 DEFB130BP0DP73 79 aa8.84□□□□□ -0.99
SDHA-216ENST00000514027 DEFB130AP0DP74 79 aa8.84□□□□□ -0.99
SDHA-216ENST00000514027 IGKV3D-7A0A0C4DH55 119 aa8.84□□□□□ -0.99
SDHA-216ENST00000514027 BAALC-AS2P0C853 105 aa8.84□□□□□ -0.99
SDHA-216ENST00000514027 FAM19A3Q7Z5A8 133 aa8.84□□□□□ -0.99
SDHA-216ENST00000514027 LINC01561Q8N1V8 128 aa8.84□□□□□ -0.99
SDHA-216ENST00000514027 OVOL2Q9BRP0 275 aa8.84□□□□□ -0.99
SDHA-216ENST00000514027 UNC79Q9P2D8 2635 aa8.83□□□□□ -1
SDHA-216ENST00000514027 FAM236DA0A1B0GTK5 79 aa8.82□□□□□ -1
SDHA-216ENST00000514027 FAM236CP0DP71 79 aa8.82□□□□□ -1
SDHA-216ENST00000514027 ANK3Q12955 4377 aaKnown RBP8.82□□□□□ -1
SDHA-216ENST00000514027 KRTAP10-3P60369 221 aa8.82□□□□□ -1
SDHA-216ENST00000514027 TOMM7Q9P0U1 55 aa8.82□□□□□ -1
SDHA-216ENST00000514027 V9GYY9 64 aa8.82□□□□□ -1
SDHA-216ENST00000514027 FASNP49327 2511 aaKnown RBP8.82□□□□□ -1
SDHA-216ENST00000514027 HIVEP2P31629 2446 aa8.82□□□□□ -1
SDHA-216ENST00000514027 DNAL4O96015 105 aa8.81□□□□□ -1
SDHA-216ENST00000514027 IGLV4-60A0A075B6I1 120 aa8.81□□□□□ -1
SDHA-216ENST00000514027 SOSTDC1Q6X4U4 206 aa8.81□□□□□ -1
SDHA-216ENST00000514027 SERP1Q9Y6X1 66 aa8.81□□□□□ -1
SDHA-216ENST00000514027 TRBV6-8A0A0A6YYG3 113 aa8.8□□□□□ -1
SDHA-216ENST00000514027 COPS9Q8WXC6 57 aa8.8□□□□□ -1
SDHA-216ENST00000514027 LINC00482Q8N8I6 264 aa8.78□□□□□ -1
SDHA-216ENST00000514027 COX7B2Q8TF08 81 aa8.78□□□□□ -1
SDHA-216ENST00000514027 FAM218AQ96MZ4 157 aa8.77□□□□□ -1.01
SDHA-216ENST00000514027 FN1P02751 2386 aaKnown RBP8.77□□□□□ -1.01
SDHA-216ENST00000514027 A0A096LPF7 62 aa8.77□□□□□ -1.01
SDHA-216ENST00000514027 GYPEP15421 78 aa8.77□□□□□ -1.01
SDHA-216ENST00000514027 LINC00846Q9NV44 126 aa8.77□□□□□ -1.01
SDHA-216ENST00000514027 HECTD1Q9ULT8 2610 aa8.76□□□□□ -1.01
SDHA-216ENST00000514027 LY6G6DO95868 133 aa8.76□□□□□ -1.01
SDHA-216ENST00000514027 C1orf195Q5TG92 126 aa8.76□□□□□ -1.01
SDHA-216ENST00000514027 NBEAL2Q6ZNJ1 2754 aa8.76□□□□□ -1.01
SDHA-216ENST00000514027 SPATA3Q8NHX4 192 aa8.76□□□□□ -1.01
SDHA-216ENST00000514027 GHRHP01286 108 aa8.75□□□□□ -1.01
SDHA-216ENST00000514027 C11orf68Q9H3H3 251 aaKnown RBP8.75□□□□□ -1.01
SDHA-216ENST00000514027 VWFP04275 2813 aa8.75□□□□□ -1.01
SDHA-216ENST00000514027 CLPSL2Q6UWE3 100 aa8.74□□□□□ -1.01
SDHA-216ENST00000514027 MIR7-3HGQ8N6C7 128 aa8.74□□□□□ -1.01
SDHA-216ENST00000514027 C14orf132Q9NPU4 83 aa8.74□□□□□ -1.01
SDHA-216ENST00000514027 DEFB4AO15263 64 aa8.74□□□□□ -1.01
SDHA-216ENST00000514027 LINC00158P58513 81 aa8.74□□□□□ -1.01
SDHA-216ENST00000514027 FP248Q71RG6 208 aaPredicted RBP8.74□□□□□ -1.01
SDHA-216ENST00000514027 C20orf197Q8N268 126 aa8.74□□□□□ -1.01
SDHA-216ENST00000514027 IGHV3OR16-9A0A0B4J2B5 98 aa8.73□□□□□ -1.01
SDHA-216ENST00000514027 Q9HAA7 133 aa8.73□□□□□ -1.01
SDHA-216ENST00000514027 X6R8D5 127 aa8.73□□□□□ -1.01
SDHA-216ENST00000514027 SMIM26A0A096LP01 95 aa8.73□□□□□ -1.01
SDHA-216ENST00000514027 LINC00959A0A1B0GUT2 108 aa8.72□□□□□ -1.01
SDHA-216ENST00000514027 INAFM1C9JVW0 142 aa8.72□□□□□ -1.01
SDHA-216ENST00000514027 H7BZZ5 65 aa8.72□□□□□ -1.01
SDHA-216ENST00000514027 VPREB1P12018 145 aa8.72□□□□□ -1.01
SDHA-216ENST00000514027 XCL1P47992 114 aa8.72□□□□□ -1.01
SDHA-216ENST00000514027 DEFB135Q30KP9 77 aa8.72□□□□□ -1.01
SDHA-216ENST00000514027 CRPP02741 224 aa8.72□□□□□ -1.01
SDHA-216ENST00000514027 C9orf129Q5T035 196 aaKnown RBP8.72□□□□□ -1.01
SDHA-216ENST00000514027 RPL28P46779 137 aaKnown RBP8.71□□□□□ -1.02
SDHA-216ENST00000514027 SND1-IT1Q9HBX3 110 aa8.71□□□□□ -1.02
SDHA-216ENST00000514027 A0A087WZ39 114 aa8.7□□□□□ -1.02
SDHA-216ENST00000514027 LINC00612Q8N6U2 182 aa8.7□□□□□ -1.02
SDHA-216ENST00000514027 OBSCN-AS1Q96MR7 158 aa8.7□□□□□ -1.02
SDHA-216ENST00000514027 PRO0255Q9UI72 69 aa8.7□□□□□ -1.02
SDHA-216ENST00000514027 NOTCH2Q04721 2471 aa8.7□□□□□ -1.02
SDHA-216ENST00000514027 A0A0U1RQV1 116 aa8.7□□□□□ -1.02
SDHA-216ENST00000514027 PAX4O43316 350 aa8.7□□□□□ -1.02
SDHA-216ENST00000514027 C9orf66Q5T8R8 295 aa8.7□□□□□ -1.02
SDHA-216ENST00000514027 BRK1Q8WUW1 75 aa8.7□□□□□ -1.02
SDHA-216ENST00000514027 OTOGQ6ZRI0 2925 aa8.69□□□□□ -1.02
SDHA-216ENST00000514027 TRAV23DV6A0A075B6W5 121 aa8.69□□□□□ -1.02
SDHA-216ENST00000514027 TRAV13-2A0A0B4J235 113 aa8.69□□□□□ -1.02
SDHA-216ENST00000514027 SS18Q15532 418 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms