RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 IGIPA6NJ69 53 aa5.69□□□□□ -1.5
TCOF1-212ENST00000513538 TSPAN13O95857 204 aa5.69□□□□□ -1.5
TCOF1-212ENST00000513538 NPSP0C0P6 89 aa5.69□□□□□ -1.5
TCOF1-212ENST00000513538 C10orf91Q5T1B1 145 aa5.69□□□□□ -1.5
TCOF1-212ENST00000513538 C2orf66Q6UXQ4 117 aa5.69□□□□□ -1.5
TCOF1-212ENST00000513538 TMEM141Q96I45 108 aa5.69□□□□□ -1.5
TCOF1-212ENST00000513538 SEC11CQ9BY50 192 aa5.69□□□□□ -1.5
TCOF1-212ENST00000513538 CARHSP1Q9Y2V2 147 aaKnown RBP5.69□□□□□ -1.5
TCOF1-212ENST00000513538 ORMDL2Q53FV1 153 aa5.68□□□□□ -1.5
TCOF1-212ENST00000513538 ZC2HC1BQ5TFG8 222 aa5.68□□□□□ -1.5
TCOF1-212ENST00000513538 LINC01561Q8N1V8 128 aa5.68□□□□□ -1.5
TCOF1-212ENST00000513538 CYSLTR1Q9Y271 337 aa5.68□□□□□ -1.5
TCOF1-212ENST00000513538 LINC01546A6NGU7 62 aa5.67□□□□□ -1.5
TCOF1-212ENST00000513538 NDUFC2-KCTD14E9PQ53 114 aa5.67□□□□□ -1.5
TCOF1-212ENST00000513538 ZNF861PO60384 105 aa5.67□□□□□ -1.5
TCOF1-212ENST00000513538 G0S2P27469 103 aa5.67□□□□□ -1.5
TCOF1-212ENST00000513538 TEX43Q6ZNM6 134 aa5.67□□□□□ -1.5
TCOF1-212ENST00000513538 NXT2Q9NPJ8 142 aaKnown RBP5.67□□□□□ -1.5
TCOF1-212ENST00000513538 FAT4Q6V0I7 4981 aa5.66□□□□□ -1.5
TCOF1-212ENST00000513538 TGIF2-C20orf24A0A0A6YYL0 155 aa5.66□□□□□ -1.5
TCOF1-212ENST00000513538 TRBV30A0A0K0K1B3 111 aa5.66□□□□□ -1.5
TCOF1-212ENST00000513538 KIAA1644Q3SXP7 199 aa5.66□□□□□ -1.5
TCOF1-212ENST00000513538 TOMM6Q96B49 74 aa5.66□□□□□ -1.5
TCOF1-212ENST00000513538 Q6ZN92 141 aa5.65□□□□□ -1.5
TCOF1-212ENST00000513538 TIMM17AQ99595 171 aa5.65□□□□□ -1.5
TCOF1-212ENST00000513538 C2orf88Q9BSF0 95 aa5.65□□□□□ -1.5
TCOF1-212ENST00000513538 ALKBH7Q9BT30 221 aaPredicted RBP5.65□□□□□ -1.5
TCOF1-212ENST00000513538 GNB1LQ9BYB4 327 aa5.65□□□□□ -1.5
TCOF1-212ENST00000513538 PAPPA-AS1Q5QFB9 102 aa5.64□□□□□ -1.51
TCOF1-212ENST00000513538 COMMD7Q86VX2 200 aa5.64□□□□□ -1.51
TCOF1-212ENST00000513538 LINC00469Q8N7U9 141 aa5.64□□□□□ -1.51
TCOF1-212ENST00000513538 RETNLBQ9BQ08 111 aa5.64□□□□□ -1.51
TCOF1-212ENST00000513538 VCX2Q9H322 139 aa5.64□□□□□ -1.51
TCOF1-212ENST00000513538 XAGE1AQ9HD64 81 aa5.64□□□□□ -1.51
TCOF1-212ENST00000513538 C22orf24Q9Y442 160 aa5.64□□□□□ -1.51
TCOF1-212ENST00000513538 NUPR1O60356 82 aa5.63□□□□□ -1.51
TCOF1-212ENST00000513538 COX19Q49B96 90 aa5.63□□□□□ -1.51
TCOF1-212ENST00000513538 ERASQ7Z444 233 aa5.63□□□□□ -1.51
TCOF1-212ENST00000513538 PACRGQ96M98 296 aaPredicted RBP5.63□□□□□ -1.51
TCOF1-212ENST00000513538 ANAPC11Q9NYG5 84 aa5.63□□□□□ -1.51
TCOF1-212ENST00000513538 SEC11AP67812 179 aa5.62□□□□□ -1.51
TCOF1-212ENST00000513538 KRTAP13-2Q52LG2 175 aa5.62□□□□□ -1.51
TCOF1-212ENST00000513538 Q8IZM0 81 aa5.62□□□□□ -1.51
TCOF1-212ENST00000513538 CDKN2A-AS1Q9UH64 79 aa5.62□□□□□ -1.51
TCOF1-212ENST00000513538 IGLV5-45A0A087WSX0 123 aa5.61□□□□□ -1.51
TCOF1-212ENST00000513538 LINC01549A6NIU2 74 aa5.61□□□□□ -1.51
TCOF1-212ENST00000513538 S100PP25815 95 aa5.61□□□□□ -1.51
TCOF1-212ENST00000513538 HERVK_113P63121 156 aa5.61□□□□□ -1.51
TCOF1-212ENST00000513538 RHEBQ15382 184 aa5.61□□□□□ -1.51
TCOF1-212ENST00000513538 TYMSOSQ8TAI1 123 aa5.61□□□□□ -1.51
TCOF1-212ENST00000513538 URB1-AS1Q96HZ7 61 aa5.61□□□□□ -1.51
TCOF1-212ENST00000513538 A0A096LNJ9 63 aa5.6□□□□□ -1.51
TCOF1-212ENST00000513538 BCE1O60756 84 aa5.6□□□□□ -1.51
TCOF1-212ENST00000513538 PRSS2P07478 247 aa5.6□□□□□ -1.51
TCOF1-212ENST00000513538 CRYGAP11844 174 aa5.6□□□□□ -1.51
TCOF1-212ENST00000513538 MRPL55Q7Z7F7 128 aaKnown RBP5.6□□□□□ -1.51
TCOF1-212ENST00000513538 SCGB3A1Q96QR1 104 aa5.6□□□□□ -1.51
TCOF1-212ENST00000513538 TOMM7Q9P0U1 55 aa5.6□□□□□ -1.51
TCOF1-212ENST00000513538 MUC17Q685J3 4493 aa5.6□□□□□ -1.51
TCOF1-212ENST00000513538 TINCRA0A1B0GVN0 87 aa5.59□□□□□ -1.51
TCOF1-212ENST00000513538 SMIM1B2RUZ4 78 aa5.59□□□□□ -1.51
TCOF1-212ENST00000513538 CKS1BP61024 79 aa5.59□□□□□ -1.51
TCOF1-212ENST00000513538 C6orf226Q5I0X4 101 aa5.59□□□□□ -1.51
TCOF1-212ENST00000513538 KRTAP13-1Q8IUC0 172 aa5.59□□□□□ -1.51
TCOF1-212ENST00000513538 CST9LQ9H4G1 147 aa5.59□□□□□ -1.51
TCOF1-212ENST00000513538 RPS10P5Q9NQ39 176 aa5.59□□□□□ -1.51
TCOF1-212ENST00000513538 TP73-AS1Q9UF72 201 aa5.59□□□□□ -1.51
TCOF1-212ENST00000513538 RPL37AP8A6NKH3 93 aa5.58□□□□□ -1.52
TCOF1-212ENST00000513538 RPL28P46779 137 aaKnown RBP5.58□□□□□ -1.52
TCOF1-212ENST00000513538 FABP9Q0Z7S8 132 aa5.58□□□□□ -1.52
TCOF1-212ENST00000513538 TPRXLQ17RH7 258 aa5.58□□□□□ -1.52
TCOF1-212ENST00000513538 LBHQ53QV2 105 aaPredicted RBP5.58□□□□□ -1.52
TCOF1-212ENST00000513538 GEMIN7Q9H840 131 aaKnown RBP5.58□□□□□ -1.52
TCOF1-212ENST00000513538 F8VRH5 84 aa5.57□□□□□ -1.52
TCOF1-212ENST00000513538 PMVKQ15126 192 aa5.57□□□□□ -1.52
TCOF1-212ENST00000513538 PDZD11Q5EBL8 140 aa5.57□□□□□ -1.52
TCOF1-212ENST00000513538 C18orf32Q8TCD1 76 aa5.57□□□□□ -1.52
TCOF1-212ENST00000513538 LINC00167Q96N53 147 aa5.57□□□□□ -1.52
TCOF1-212ENST00000513538 YPEL4Q96NS1 127 aa5.57□□□□□ -1.52
TCOF1-212ENST00000513538 CXCL5P42830 114 aa5.56□□□□□ -1.52
TCOF1-212ENST00000513538 FA2HQ7L5A8 372 aa5.56□□□□□ -1.52
TCOF1-212ENST00000513538 LINC00304Q8N9R0 145 aa5.56□□□□□ -1.52
TCOF1-212ENST00000513538 CDIP1Q9H305 208 aa5.56□□□□□ -1.52
TCOF1-212ENST00000513538 IGLV7-46A0A075B6I9 117 aa5.55□□□□□ -1.52
TCOF1-212ENST00000513538 GAGE10A6NGK3 116 aa5.55□□□□□ -1.52
TCOF1-212ENST00000513538 APOC3P02656 99 aa5.55□□□□□ -1.52
TCOF1-212ENST00000513538 LINC00614P0C842 121 aa5.55□□□□□ -1.52
TCOF1-212ENST00000513538 IGLC3P0DOY3 106 aa5.55□□□□□ -1.52
TCOF1-212ENST00000513538 COX7B2Q8TF08 81 aa5.55□□□□□ -1.52
TCOF1-212ENST00000513538 TRAPPC1Q9Y5R8 145 aa5.55□□□□□ -1.52
TCOF1-212ENST00000513538 IGLV5-39A0A0G2JS06 123 aa5.54□□□□□ -1.52
TCOF1-212ENST00000513538 SCO1O75880 301 aa5.54□□□□□ -1.52
TCOF1-212ENST00000513538 SNAPINO95295 136 aa5.54□□□□□ -1.52
TCOF1-212ENST00000513538 FAM229BQ4G0N7 80 aa5.54□□□□□ -1.52
TCOF1-212ENST00000513538 SMCO4Q9NRQ5 59 aa5.54□□□□□ -1.52
TCOF1-212ENST00000513538 IGLV5-37A0A075B6J1 123 aa5.53□□□□□ -1.52
TCOF1-212ENST00000513538 SPINK8P0C7L1 97 aa5.53□□□□□ -1.52
TCOF1-212ENST00000513538 SVBPQ8N300 66 aa5.53□□□□□ -1.52
TCOF1-212ENST00000513538 HBDP02042 147 aa5.52□□□□□ -1.53
TCOF1-212ENST00000513538 ZNF22P17026 224 aaPredicted RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms