RNA–Protein interactions for RNA: ENST00000511255.1

SMAD1-210, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-210ENST00000511255 KRTAP10-7P60409 375 aaPredicted RBP4.88□□□□□ -1.63
SMAD1-210ENST00000511255 RPL18AQ02543 176 aaKnown RBP4.88□□□□□ -1.63
SMAD1-210ENST00000511255 CIRBPQ14011 172 aaKnown RBP4.88□□□□□ -1.63
SMAD1-210ENST00000511255 STPG4Q8N801 248 aa4.88□□□□□ -1.63
SMAD1-210ENST00000511255 C2orf48Q96LS8 159 aa4.88□□□□□ -1.63
SMAD1-210ENST00000511255 AMELXQ99217 191 aa4.88□□□□□ -1.63
SMAD1-210ENST00000511255 TIMM17AQ99595 171 aa4.88□□□□□ -1.63
SMAD1-210ENST00000511255 FLG2Q5D862 2391 aaPredicted RBP4.88□□□□□ -1.63
SMAD1-210ENST00000511255 FAT1Q14517 4588 aa4.88□□□□□ -1.63
SMAD1-210ENST00000511255 ABCA13Q86UQ4 5058 aa4.88□□□□□ -1.63
SMAD1-210ENST00000511255 A0A087WZ39 114 aa4.87□□□□□ -1.63
SMAD1-210ENST00000511255 A0A0J9YXV3 536 aa4.87□□□□□ -1.63
SMAD1-210ENST00000511255 LOC107984640A0A0U1RRK4 108 aa4.87□□□□□ -1.63
SMAD1-210ENST00000511255 NDUFA1O15239 70 aa4.87□□□□□ -1.63
SMAD1-210ENST00000511255 SEC11AP67812 179 aa4.87□□□□□ -1.63
SMAD1-210ENST00000511255 LINC00173Q6ZV60 143 aa4.87□□□□□ -1.63
SMAD1-210ENST00000511255 ERASQ7Z444 233 aa4.87□□□□□ -1.63
SMAD1-210ENST00000511255 SLC7A5P1Q8MH63 180 aa4.87□□□□□ -1.63
SMAD1-210ENST00000511255 C7orf33Q8WU49 177 aa4.87□□□□□ -1.63
SMAD1-210ENST00000511255 GEMIN7Q9H840 131 aaKnown RBP4.87□□□□□ -1.63
SMAD1-210ENST00000511255 TOMM7Q9P0U1 55 aa4.87□□□□□ -1.63
SMAD1-210ENST00000511255 LINC00474Q9P2X8 69 aa4.87□□□□□ -1.63
SMAD1-210ENST00000511255 DNAH8Q96JB1 4490 aa4.87□□□□□ -1.63
SMAD1-210ENST00000511255 LINC01549A6NIU2 74 aa4.86□□□□□ -1.63
SMAD1-210ENST00000511255 PRSS2P07478 247 aa4.86□□□□□ -1.63
SMAD1-210ENST00000511255 CBLN2Q8IUK8 224 aa4.86□□□□□ -1.63
SMAD1-210ENST00000511255 C18orf32Q8TCD1 76 aa4.86□□□□□ -1.63
SMAD1-210ENST00000511255 PACRGQ96M98 296 aaPredicted RBP4.86□□□□□ -1.63
SMAD1-210ENST00000511255 PLAC8Q9NZF1 115 aa4.86□□□□□ -1.63
SMAD1-210ENST00000511255 LINC01546A6NGU7 62 aa4.85□□□□□ -1.63
SMAD1-210ENST00000511255 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.85□□□□□ -1.63
SMAD1-210ENST00000511255 LINC00614P0C842 121 aa4.85□□□□□ -1.63
SMAD1-210ENST00000511255 NDUFA6P56556 154 aa4.85□□□□□ -1.63
SMAD1-210ENST00000511255 RAB5BP61020 215 aa4.85□□□□□ -1.63
SMAD1-210ENST00000511255 HERVK_113P63121 156 aa4.85□□□□□ -1.63
SMAD1-210ENST00000511255 UNQ6190/PRO20217Q6UXQ8 127 aa4.85□□□□□ -1.63
SMAD1-210ENST00000511255 LINC00469Q8N7U9 141 aa4.85□□□□□ -1.63
SMAD1-210ENST00000511255 PCLOQ9Y6V0 5065 aa4.84□□□□□ -1.63
SMAD1-210ENST00000511255 F8WDY8 70 aa4.84□□□□□ -1.63
SMAD1-210ENST00000511255 HBDP02042 147 aa4.84□□□□□ -1.63
SMAD1-210ENST00000511255 PMCHL1Q16048 86 aa4.84□□□□□ -1.63
SMAD1-210ENST00000511255 C6orf226Q5I0X4 101 aa4.84□□□□□ -1.63
SMAD1-210ENST00000511255 C2orf82Q6UX34 121 aa4.84□□□□□ -1.63
SMAD1-210ENST00000511255 LINC01561Q8N1V8 128 aa4.84□□□□□ -1.63
SMAD1-210ENST00000511255 MRPL35Q9NZE8 188 aaKnown RBP4.84□□□□□ -1.63
SMAD1-210ENST00000511255 C6orf48Q9UBA6 75 aa4.84□□□□□ -1.63
SMAD1-210ENST00000511255 CDKN2A-AS1Q9UH64 79 aa4.84□□□□□ -1.63
SMAD1-210ENST00000511255 CKS1BP61024 79 aa4.83□□□□□ -1.64
SMAD1-210ENST00000511255 KIAA0087Q14695 138 aa4.83□□□□□ -1.64
SMAD1-210ENST00000511255 PMVKQ15126 192 aa4.83□□□□□ -1.64
SMAD1-210ENST00000511255 GAGE2EQ4V326 116 aa4.83□□□□□ -1.64
SMAD1-210ENST00000511255 FAM19A3Q7Z5A8 133 aa4.83□□□□□ -1.64
SMAD1-210ENST00000511255 URB1-AS1Q96HZ7 61 aa4.83□□□□□ -1.64
SMAD1-210ENST00000511255 YPEL4Q96NS1 127 aa4.83□□□□□ -1.64
SMAD1-210ENST00000511255 CST9LQ9H4G1 147 aa4.83□□□□□ -1.64
SMAD1-210ENST00000511255 GAGE2DQ9UEU5 116 aa4.83□□□□□ -1.64
SMAD1-210ENST00000511255 SRRM2Q9UQ35 2752 aaKnown RBP4.82□□□□□ -1.64
SMAD1-210ENST00000511255 TRBV30A0A0K0K1B3 111 aa4.82□□□□□ -1.64
SMAD1-210ENST00000511255 TINCRA0A1B0GVN0 87 aa4.82□□□□□ -1.64
SMAD1-210ENST00000511255 KRTAP10-4P60372 401 aaPredicted RBP4.82□□□□□ -1.64
SMAD1-210ENST00000511255 BAGE3Q86Y29 109 aa4.82□□□□□ -1.64
SMAD1-210ENST00000511255 Q8IZM0 81 aa4.82□□□□□ -1.64
SMAD1-210ENST00000511255 DMBT1Q9UGM3 2413 aaPredicted RBP4.81□□□□□ -1.64
SMAD1-210ENST00000511255 A0A096LNJ9 63 aa4.81□□□□□ -1.64
SMAD1-210ENST00000511255 A0A1W2PNN7 141 aa4.81□□□□□ -1.64
SMAD1-210ENST00000511255 H3BRM9 83 aa4.81□□□□□ -1.64
SMAD1-210ENST00000511255 ATP5LO75964 103 aa4.81□□□□□ -1.64
SMAD1-210ENST00000511255 TRGC2P03986 189 aa4.81□□□□□ -1.64
SMAD1-210ENST00000511255 SPINK8P0C7L1 97 aa4.81□□□□□ -1.64
SMAD1-210ENST00000511255 C9orf116Q5BN46 136 aaPredicted RBP4.81□□□□□ -1.64
SMAD1-210ENST00000511255 Q6ZRP5 223 aa4.81□□□□□ -1.64
SMAD1-210ENST00000511255 SMIM1B2RUZ4 78 aa4.8□□□□□ -1.64
SMAD1-210ENST00000511255 HSBP1O75506 76 aa4.8□□□□□ -1.64
SMAD1-210ENST00000511255 TLX1NBP0CAT3 122 aa4.8□□□□□ -1.64
SMAD1-210ENST00000511255 CXCL5P42830 114 aa4.8□□□□□ -1.64
SMAD1-210ENST00000511255 HNRNPA3P51991 378 aaKnown RBP4.8□□□□□ -1.64
SMAD1-210ENST00000511255 PDZD11Q5EBL8 140 aa4.8□□□□□ -1.64
SMAD1-210ENST00000511255 FAM19A5Q7Z5A7 132 aaPredicted RBP4.8□□□□□ -1.64
SMAD1-210ENST00000511255 COX7B2Q8TF08 81 aa4.8□□□□□ -1.64
SMAD1-210ENST00000511255 CHCHD1Q96BP2 118 aaKnown RBP4.8□□□□□ -1.64
SMAD1-210ENST00000511255 VPS13BQ7Z7G8 4022 aa4.8□□□□□ -1.64
SMAD1-210ENST00000511255 IGLV5-45A0A087WSX0 123 aa4.79□□□□□ -1.64
SMAD1-210ENST00000511255 NDUFC2-KCTD14E9PQ53 114 aa4.79□□□□□ -1.64
SMAD1-210ENST00000511255 F8VRH5 84 aa4.79□□□□□ -1.64
SMAD1-210ENST00000511255 IGLC3P0DOY3 106 aa4.79□□□□□ -1.64
SMAD1-210ENST00000511255 PRR3P79522 188 aaKnown RBP4.79□□□□□ -1.64
SMAD1-210ENST00000511255 PHF5AQ7RTV0 110 aaKnown RBP4.79□□□□□ -1.64
SMAD1-210ENST00000511255 MPLKIPQ8TAP9 179 aa4.79□□□□□ -1.64
SMAD1-210ENST00000511255 FAM168BA1KXE4 195 aa4.78□□□□□ -1.64
SMAD1-210ENST00000511255 ZNF22P17026 224 aaPredicted RBP4.78□□□□□ -1.64
SMAD1-210ENST00000511255 TMEM170BQ5T4T1 132 aa4.78□□□□□ -1.64
SMAD1-210ENST00000511255 FAM19A2Q8N3H0 131 aa4.78□□□□□ -1.64
SMAD1-210ENST00000511255 IFI27L1Q96BM0 104 aa4.78□□□□□ -1.64
SMAD1-210ENST00000511255 C11orf86A6NJI1 115 aa4.77□□□□□ -1.65
SMAD1-210ENST00000511255 H0Y8G0 127 aa4.77□□□□□ -1.65
SMAD1-210ENST00000511255 M0QXV9 152 aa4.77□□□□□ -1.65
SMAD1-210ENST00000511255 SCO1O75880 301 aa4.77□□□□□ -1.65
SMAD1-210ENST00000511255 SERF1AO75920 110 aa4.77□□□□□ -1.65
SMAD1-210ENST00000511255 OXTP01178 125 aa4.77□□□□□ -1.65
SMAD1-210ENST00000511255 UBE2BP63146 152 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms