RNA–Protein interactions for RNA: ENST00000510757.1

TRIO-216, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 509 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-216ENST00000510757 HERVK_113P63121 156 aa4.05□□□□□ -1.76
TRIO-216ENST00000510757 MAJINQ3KP22 176 aa4.05□□□□□ -1.76
TRIO-216ENST00000510757 C9orf116Q5BN46 136 aaPredicted RBP4.05□□□□□ -1.76
TRIO-216ENST00000510757 C9orf129Q5T035 196 aaKnown RBP4.05□□□□□ -1.76
TRIO-216ENST00000510757 Q6ZN92 141 aa4.05□□□□□ -1.76
TRIO-216ENST00000510757 Q8IZM0 81 aa4.05□□□□□ -1.76
TRIO-216ENST00000510757 STPG4Q8N801 248 aa4.05□□□□□ -1.76
TRIO-216ENST00000510757 CHCHD1Q96BP2 118 aaKnown RBP4.05□□□□□ -1.76
TRIO-216ENST00000510757 C2orf88Q9BSF0 95 aa4.05□□□□□ -1.76
TRIO-216ENST00000510757 LOC107984640A0A0U1RRK4 108 aa4.04□□□□□ -1.76
TRIO-216ENST00000510757 C11orf86A6NJI1 115 aa4.04□□□□□ -1.76
TRIO-216ENST00000510757 ZNF22P17026 224 aaPredicted RBP4.04□□□□□ -1.76
TRIO-216ENST00000510757 SRSF9Q13242 221 aaKnown RBP eCLIP4.04□□□□□ -1.76
TRIO-216ENST00000510757 TRBV30A0A0K0K1B3 111 aa4.03□□□□□ -1.76
TRIO-216ENST00000510757 KRTAP29-1A8MX34 341 aaPredicted RBP4.03□□□□□ -1.76
TRIO-216ENST00000510757 NDUFA1O15239 70 aa4.03□□□□□ -1.76
TRIO-216ENST00000510757 SERF1AO75920 110 aa4.03□□□□□ -1.76
TRIO-216ENST00000510757 PLA2G1BP04054 148 aaKnown RBP4.03□□□□□ -1.76
TRIO-216ENST00000510757 MT1HL1P0DM35 61 aa4.03□□□□□ -1.76
TRIO-216ENST00000510757 RPL37AP61513 92 aaKnown RBP4.03□□□□□ -1.76
TRIO-216ENST00000510757 GAGE2BQ13066 116 aa4.03□□□□□ -1.76
TRIO-216ENST00000510757 PAPPA-AS1Q5QFB9 102 aa4.03□□□□□ -1.76
TRIO-216ENST00000510757 FAM19A2Q8N3H0 131 aa4.03□□□□□ -1.76
TRIO-216ENST00000510757 TRAV12-1A0A0B4J245 112 aa4.02□□□□□ -1.77
TRIO-216ENST00000510757 NDUFC2-KCTD14E9PQ53 114 aa4.02□□□□□ -1.77
TRIO-216ENST00000510757 HIST1H2BKO60814 126 aa4.02□□□□□ -1.77
TRIO-216ENST00000510757 HIST1H2BJP06899 126 aa4.02□□□□□ -1.77
TRIO-216ENST00000510757 SPINK8P0C7L1 97 aa4.02□□□□□ -1.77
TRIO-216ENST00000510757 HIST1H2BOP23527 126 aa4.02□□□□□ -1.77
TRIO-216ENST00000510757 HIST1H2BBP33778 126 aa4.02□□□□□ -1.77
TRIO-216ENST00000510757 SMCPP49901 116 aaPredicted RBP4.02□□□□□ -1.77
TRIO-216ENST00000510757 HIST1H2BDP58876 126 aa4.02□□□□□ -1.77
TRIO-216ENST00000510757 RAB5BP61020 215 aa4.02□□□□□ -1.77
TRIO-216ENST00000510757 HIST1H2BCP62807 126 aa4.02□□□□□ -1.77
TRIO-216ENST00000510757 SEC11AP67812 179 aa4.02□□□□□ -1.77
TRIO-216ENST00000510757 PRR3P79522 188 aaKnown RBP4.02□□□□□ -1.77
TRIO-216ENST00000510757 HIST2H2BEQ16778 126 aa4.02□□□□□ -1.77
TRIO-216ENST00000510757 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.02□□□□□ -1.77
TRIO-216ENST00000510757 LINC00469Q8N7U9 141 aa4.02□□□□□ -1.77
TRIO-216ENST00000510757 HIST1H2BHQ93079 126 aa4.02□□□□□ -1.77
TRIO-216ENST00000510757 HIST1H2BNQ99877 126 aa4.02□□□□□ -1.77
TRIO-216ENST00000510757 HIST1H2BMQ99879 126 aa4.02□□□□□ -1.77
TRIO-216ENST00000510757 LINC00474Q9P2X8 69 aa4.02□□□□□ -1.77
TRIO-216ENST00000510757 ATP5LO75964 103 aa4.01□□□□□ -1.77
TRIO-216ENST00000510757 ODF1Q14990 250 aa4.01□□□□□ -1.77
TRIO-216ENST00000510757 SERTAD4-AS1Q5TG53 156 aa4.01□□□□□ -1.77
TRIO-216ENST00000510757 PHF5AQ7RTV0 110 aaKnown RBP4.01□□□□□ -1.77
TRIO-216ENST00000510757 BAGE3Q86Y29 109 aa4.01□□□□□ -1.77
TRIO-216ENST00000510757 Q8NDZ9 215 aa4.01□□□□□ -1.77
TRIO-216ENST00000510757 COX7B2Q8TF08 81 aa4.01□□□□□ -1.77
TRIO-216ENST00000510757 IFI27L1Q96BM0 104 aa4.01□□□□□ -1.77
TRIO-216ENST00000510757 ZNF625Q96I27 306 aaPredicted RBP4.01□□□□□ -1.77
TRIO-216ENST00000510757 GEMIN7Q9H840 131 aaKnown RBP4.01□□□□□ -1.77
TRIO-216ENST00000510757 TMEM223A0PJW6 202 aa4□□□□□ -1.77
TRIO-216ENST00000510757 F8VRH5 84 aa4□□□□□ -1.77
TRIO-216ENST00000510757 RPL18AQ02543 176 aaKnown RBP4□□□□□ -1.77
TRIO-216ENST00000510757 C6orf226Q5I0X4 101 aa4□□□□□ -1.77
TRIO-216ENST00000510757 TOMM7Q9P0U1 55 aa4□□□□□ -1.77
TRIO-216ENST00000510757 PSORS1C2Q9UIG4 136 aa4□□□□□ -1.77
TRIO-216ENST00000510757 GAGE2EQ4V326 116 aa3.99□□□□□ -1.77
TRIO-216ENST00000510757 COA6Q5JTJ3 125 aaKnown RBP3.99□□□□□ -1.77
TRIO-216ENST00000510757 DPH3Q96FX2 82 aa3.99□□□□□ -1.77
TRIO-216ENST00000510757 GAGE2DQ9UEU5 116 aa3.99□□□□□ -1.77
TRIO-216ENST00000510757 CHTOPQ9Y3Y2 248 aaKnown RBP3.99□□□□□ -1.77
TRIO-216ENST00000510757 UBR4Q5T4S7 5183 aa3.99□□□□□ -1.77
TRIO-216ENST00000510757 HSBP1O75506 76 aa3.98□□□□□ -1.77
TRIO-216ENST00000510757 CXCL5P42830 114 aa3.98□□□□□ -1.77
TRIO-216ENST00000510757 NDUFA6P56556 154 aa3.98□□□□□ -1.77
TRIO-216ENST00000510757 TSPEAR-AS2P59090 65 aa3.98□□□□□ -1.77
TRIO-216ENST00000510757 CKS1BP61024 79 aa3.98□□□□□ -1.77
TRIO-216ENST00000510757 XAGE1AQ9HD64 81 aa3.98□□□□□ -1.77
TRIO-216ENST00000510757 PLA2G2DQ9UNK4 145 aa3.98□□□□□ -1.77
TRIO-216ENST00000510757 PKIGQ9Y2B9 76 aa3.98□□□□□ -1.77
TRIO-216ENST00000510757 LRP2P98164 4655 aa3.98□□□□□ -1.77
TRIO-216ENST00000510757 IGLV5-37A0A075B6J1 123 aa3.97□□□□□ -1.77
TRIO-216ENST00000510757 LEPROTL1O95214 131 aa3.97□□□□□ -1.77
TRIO-216ENST00000510757 OXTP01178 125 aa3.97□□□□□ -1.77
TRIO-216ENST00000510757 PRSS2P07478 247 aa3.97□□□□□ -1.77
TRIO-216ENST00000510757 KRTAP10-8P60410 259 aa3.97□□□□□ -1.77
TRIO-216ENST00000510757 FAM19A5Q7Z5A7 132 aaPredicted RBP3.97□□□□□ -1.77
TRIO-216ENST00000510757 PACRGQ96M98 296 aaPredicted RBP3.97□□□□□ -1.77
TRIO-216ENST00000510757 C22orf24Q9Y442 160 aa3.97□□□□□ -1.77
TRIO-216ENST00000510757 H3BRM9 83 aa3.96□□□□□ -1.78
TRIO-216ENST00000510757 C7orf33Q8WU49 177 aa3.96□□□□□ -1.78
TRIO-216ENST00000510757 PMCHL2Q9BQD1 86 aa3.96□□□□□ -1.78
TRIO-216ENST00000510757 LPAP08519 4548 aa3.96□□□□□ -1.78
TRIO-216ENST00000510757 M0QXV9 152 aa3.95□□□□□ -1.78
TRIO-216ENST00000510757 ATP6V1G1O75348 118 aa3.95□□□□□ -1.78
TRIO-216ENST00000510757 IGLV7-43P04211 117 aa3.95□□□□□ -1.78
TRIO-216ENST00000510757 KRTAP1-4P0C5Y4 121 aa3.95□□□□□ -1.78
TRIO-216ENST00000510757 VPREB1P12018 145 aa3.95□□□□□ -1.78
TRIO-216ENST00000510757 FABP4P15090 132 aa3.95□□□□□ -1.78
TRIO-216ENST00000510757 TMEM170BQ5T4T1 132 aa3.95□□□□□ -1.78
TRIO-216ENST00000510757 LCE2AQ5TA79 106 aaPredicted RBP3.95□□□□□ -1.78
TRIO-216ENST00000510757 SPINK6Q6UWN8 80 aa3.95□□□□□ -1.78
TRIO-216ENST00000510757 KRTAP13-1Q8IUC0 172 aa3.95□□□□□ -1.78
TRIO-216ENST00000510757 LINC01600Q96MT4 127 aa3.95□□□□□ -1.78
TRIO-216ENST00000510757 SND1-IT1Q9HBX3 110 aa3.95□□□□□ -1.78
TRIO-216ENST00000510757 TP73-AS1Q9UF72 201 aa3.95□□□□□ -1.78
TRIO-216ENST00000510757 ERG28Q9UKR5 140 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms