RNA–Protein interactions for RNA: ENST00000509407.5

SPARCL1-206, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-206ENST00000509407 LCE3CQ5T5A8 94 aa2.8□□□□□ -1.96
SPARCL1-206ENST00000509407 LAMA2P24043 3122 aaKnown RBP2.8□□□□□ -1.96
SPARCL1-206ENST00000509407 MYO7BQ6PIF6 2116 aa2.8□□□□□ -1.96
SPARCL1-206ENST00000509407 TET1Q8NFU7 2136 aa2.8□□□□□ -1.96
SPARCL1-206ENST00000509407 CR1P17927 2039 aa2.8□□□□□ -1.96
SPARCL1-206ENST00000509407 TNRC6BQ9UPQ9 1833 aaKnown RBP2.79□□□□□ -1.96
SPARCL1-206ENST00000509407 TRBV6-4A0A1B0GX49 114 aa2.79□□□□□ -1.96
SPARCL1-206ENST00000509407 JMJD7-PLA2G4BH0Y9G9 81 aa2.79□□□□□ -1.96
SPARCL1-206ENST00000509407 KRTAP7-1Q8IUC3 87 aa2.79□□□□□ -1.96
SPARCL1-206ENST00000509407 TTTY12Q9BZ98 90 aa2.79□□□□□ -1.96
SPARCL1-206ENST00000509407 V9GYV3 84 aa2.79□□□□□ -1.96
SPARCL1-206ENST00000509407 LAMA3Q16787 3333 aa2.79□□□□□ -1.96
SPARCL1-206ENST00000509407 MED12Q93074 2177 aa2.78□□□□□ -1.96
SPARCL1-206ENST00000509407 ESPL1Q14674 2120 aa2.78□□□□□ -1.96
SPARCL1-206ENST00000509407 ABCA7Q8IZY2 2146 aa2.78□□□□□ -1.96
SPARCL1-206ENST00000509407 COL6A3P12111 3177 aa2.78□□□□□ -1.96
SPARCL1-206ENST00000509407 NCOR1O75376 2440 aa2.78□□□□□ -1.96
SPARCL1-206ENST00000509407 TRAV40A0A0B4J280 105 aa2.78□□□□□ -1.96
SPARCL1-206ENST00000509407 CTXND1A0A1B0GTU2 59 aa2.78□□□□□ -1.96
SPARCL1-206ENST00000509407 LRCOL1A6NCL2 159 aa2.78□□□□□ -1.96
SPARCL1-206ENST00000509407 NREPQ16612 68 aa2.78□□□□□ -1.96
SPARCL1-206ENST00000509407 WFDC6Q9BQY6 131 aa2.78□□□□□ -1.96
SPARCL1-206ENST00000509407 PLAC8Q9NZF1 115 aa2.78□□□□□ -1.96
SPARCL1-206ENST00000509407 A0A0C4DFX4 3053 aa2.78□□□□□ -1.96
SPARCL1-206ENST00000509407 ARHGAP32A7KAX9 2087 aa2.78□□□□□ -1.96
SPARCL1-206ENST00000509407 UNC80Q8N2C7 3258 aa2.77□□□□□ -1.97
SPARCL1-206ENST00000509407 IGKV3OR2-268A0A0C4DH90 116 aa2.77□□□□□ -1.97
SPARCL1-206ENST00000509407 LOC730098B7Z3J9 87 aa2.77□□□□□ -1.97
SPARCL1-206ENST00000509407 IGLV3-1P01715 115 aa2.77□□□□□ -1.97
SPARCL1-206ENST00000509407 SERF2P84101 59 aa2.77□□□□□ -1.97
SPARCL1-206ENST00000509407 KLK9Q9UKQ9 250 aa2.77□□□□□ -1.97
SPARCL1-206ENST00000509407 CCL26Q9Y258 94 aa2.77□□□□□ -1.97
SPARCL1-206ENST00000509407 SZT2Q5T011 3432 aa2.77□□□□□ -1.97
SPARCL1-206ENST00000509407 TRANK1O15050 2925 aa2.77□□□□□ -1.97
SPARCL1-206ENST00000509407 TRAV1-2A0A0B4J238 106 aa2.76□□□□□ -1.97
SPARCL1-206ENST00000509407 H0Y9P7 68 aa2.76□□□□□ -1.97
SPARCL1-206ENST00000509407 ZNF137PP52743 207 aa2.76□□□□□ -1.97
SPARCL1-206ENST00000509407 HCP5Q6MZN7 132 aa2.76□□□□□ -1.97
SPARCL1-206ENST00000509407 TMEM263Q8WUH6 116 aaKnown RBP2.76□□□□□ -1.97
SPARCL1-206ENST00000509407 LINC00208Q96KT6 92 aa2.76□□□□□ -1.97
SPARCL1-206ENST00000509407 UBL5Q9BZL1 73 aa2.76□□□□□ -1.97
SPARCL1-206ENST00000509407 TTC28Q96AY4 2481 aa2.76□□□□□ -1.97
SPARCL1-206ENST00000509407 PRUNE2Q8WUY3 3088 aa2.75□□□□□ -1.97
SPARCL1-206ENST00000509407 SMIM27A0A1W2PRY6 76 aa2.75□□□□□ -1.97
SPARCL1-206ENST00000509407 HRES1P13985 223 aa2.75□□□□□ -1.97
SPARCL1-206ENST00000509407 SNRPGP62308 76 aaKnown RBP2.75□□□□□ -1.97
SPARCL1-206ENST00000509407 WFDC10AQ9H1F0 79 aa2.75□□□□□ -1.97
SPARCL1-206ENST00000509407 PRR14LQ5THK1 2151 aa2.75□□□□□ -1.97
SPARCL1-206ENST00000509407 BDP1A6H8Y1 2624 aa2.75□□□□□ -1.97
SPARCL1-206ENST00000509407 BRWD1Q9NSI6 2320 aa2.75□□□□□ -1.97
SPARCL1-206ENST00000509407 PCDH15Q96QU1 1955 aa2.74□□□□□ -1.97
SPARCL1-206ENST00000509407 CHD7Q9P2D1 2997 aa2.74□□□□□ -1.97
SPARCL1-206ENST00000509407 CHD9Q3L8U1 2897 aa2.74□□□□□ -1.97
SPARCL1-206ENST00000509407 IGKV2-40A0A087WW87 121 aaPredicted RBP2.74□□□□□ -1.97
SPARCL1-206ENST00000509407 TRAV21A0A0B4J279 112 aa2.74□□□□□ -1.97
SPARCL1-206ENST00000509407 IGKV2D-40P01614 121 aaPredicted RBP2.74□□□□□ -1.97
SPARCL1-206ENST00000509407 PLNP26678 52 aa2.74□□□□□ -1.97
SPARCL1-206ENST00000509407 DEFB134Q4QY38 66 aa2.74□□□□□ -1.97
SPARCL1-206ENST00000509407 MAPK1IP1LQ8NDC0 245 aa2.74□□□□□ -1.97
SPARCL1-206ENST00000509407 SPRR4Q96PI1 79 aa2.74□□□□□ -1.97
SPARCL1-206ENST00000509407 EYSQ5T1H1 3165 aa2.73□□□□□ -1.97
SPARCL1-206ENST00000509407 A0A1W2PNN7 141 aa2.73□□□□□ -1.97
SPARCL1-206ENST00000509407 RNASE3P12724 160 aaKnown RBP2.73□□□□□ -1.97
SPARCL1-206ENST00000509407 CAV3P56539 151 aa2.73□□□□□ -1.97
SPARCL1-206ENST00000509407 COX17Q14061 63 aa2.73□□□□□ -1.97
SPARCL1-206ENST00000509407 SPATA8Q6RVD6 105 aa2.73□□□□□ -1.97
SPARCL1-206ENST00000509407 ENHOQ6UWT2 76 aa2.73□□□□□ -1.97
SPARCL1-206ENST00000509407 WFDC9Q8NEX5 89 aa2.73□□□□□ -1.97
SPARCL1-206ENST00000509407 CDH23Q9H251 3354 aa2.73□□□□□ -1.97
SPARCL1-206ENST00000509407 CACNA1DQ01668 2161 aa2.73□□□□□ -1.97
SPARCL1-206ENST00000509407 MUC6Q6W4X9 2439 aa2.72□□□□□ -1.97
SPARCL1-206ENST00000509407 A0A0G2JQZ4 141 aa2.72□□□□□ -1.97
SPARCL1-206ENST00000509407 TRBV6-1A0A0K0K1D8 114 aa2.72□□□□□ -1.97
SPARCL1-206ENST00000509407 LCE6AA0A183 80 aa2.72□□□□□ -1.97
SPARCL1-206ENST00000509407 RP1P56715 2156 aa2.72□□□□□ -1.97
SPARCL1-206ENST00000509407 NDPQ00604 133 aa2.72□□□□□ -1.97
SPARCL1-206ENST00000509407 OBSCN-AS1Q96MR7 158 aa2.72□□□□□ -1.97
SPARCL1-206ENST00000509407 SPAG17Q6Q759 2223 aa2.72□□□□□ -1.97
SPARCL1-206ENST00000509407 RPL37AP61513 92 aaKnown RBP2.71□□□□□ -1.98
SPARCL1-206ENST00000509407 C10orf113Q5VZT2 155 aa2.71□□□□□ -1.98
SPARCL1-206ENST00000509407 TMEM14CQ9P0S9 112 aa2.71□□□□□ -1.98
SPARCL1-206ENST00000509407 NCOA6Q14686 2063 aaPredicted RBP2.71□□□□□ -1.98
SPARCL1-206ENST00000509407 ZDBF2Q9HCK1 2354 aa2.71□□□□□ -1.98
SPARCL1-206ENST00000509407 XIRP2A4UGR9 3374 aa2.7□□□□□ -1.98
SPARCL1-206ENST00000509407 COL5A1P20908 1838 aaPredicted RBP2.7□□□□□ -1.98
SPARCL1-206ENST00000509407 PIEZO1Q92508 2521 aa2.7□□□□□ -1.98
SPARCL1-206ENST00000509407 J3QRE1 110 aa2.7□□□□□ -1.98
SPARCL1-206ENST00000509407 SPINK7P58062 85 aa2.7□□□□□ -1.98
SPARCL1-206ENST00000509407 FXYD3Q14802 87 aa2.7□□□□□ -1.98
SPARCL1-206ENST00000509407 VCANP13611 3396 aa2.69□□□□□ -1.98
SPARCL1-206ENST00000509407 TECTAO75443 2155 aa2.69□□□□□ -1.98
SPARCL1-206ENST00000509407 A0A087WTM6 91 aa2.69□□□□□ -1.98
SPARCL1-206ENST00000509407 NBDYA0A0U1RRE5 68 aa2.69□□□□□ -1.98
SPARCL1-206ENST00000509407 K7EMI3 77 aa2.69□□□□□ -1.98
SPARCL1-206ENST00000509407 C10orf55Q5SWW7 151 aa2.69□□□□□ -1.98
SPARCL1-206ENST00000509407 LINC00322Q6ZN03 302 aaPredicted RBP2.69□□□□□ -1.98
SPARCL1-206ENST00000509407 ZCCHC13Q8WW36 166 aaKnown RBP2.69□□□□□ -1.98
SPARCL1-206ENST00000509407 GAFA1Q96PS6 74 aa2.69□□□□□ -1.98
SPARCL1-206ENST00000509407 CEP192Q8TEP8 1941 aa2.68□□□□□ -1.98
SPARCL1-206ENST00000509407 DNAJC13O75165 2243 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms