RNA–Protein interactions for RNA: ENST00000509281.1

SNX2-208, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-208ENST00000509281 RANP62826 216 aaKnown RBP0.77□□□□□ -2.29
SNX2-208ENST00000509281 COX6A2Q02221 97 aa0.77□□□□□ -2.29
SNX2-208ENST00000509281 SURF2Q15527 256 aaPredicted RBP0.77□□□□□ -2.29
SNX2-208ENST00000509281 IBA57Q5T440 356 aaKnown RBP0.77□□□□□ -2.29
SNX2-208ENST00000509281 TMEM78Q5T7P6 136 aa0.77□□□□□ -2.29
SNX2-208ENST00000509281 CFAP126Q5VTH2 177 aa0.77□□□□□ -2.29
SNX2-208ENST00000509281 C10orf113Q5VZT2 155 aa0.77□□□□□ -2.29
SNX2-208ENST00000509281 MIC13Q5XKP0 118 aa0.77□□□□□ -2.29
SNX2-208ENST00000509281 SPINK6Q6UWN8 80 aa0.77□□□□□ -2.29
SNX2-208ENST00000509281 IZUMO2Q6UXV1 221 aa0.77□□□□□ -2.29
SNX2-208ENST00000509281 S100A7AQ86SG5 101 aa0.77□□□□□ -2.29
SNX2-208ENST00000509281 BPIFA4PQ86YQ2 179 aa0.77□□□□□ -2.29
SNX2-208ENST00000509281 CLVS1Q8IUQ0 354 aaPredicted RBP0.77□□□□□ -2.29
SNX2-208ENST00000509281 C12orf45Q8N5I9 185 aaPredicted RBP0.77□□□□□ -2.29
SNX2-208ENST00000509281 DIRAS2Q96HU8 199 aa0.77□□□□□ -2.29
SNX2-208ENST00000509281 HYLS1Q96M11 299 aa0.77□□□□□ -2.29
SNX2-208ENST00000509281 SLC50A1Q9BRV3 221 aa0.77□□□□□ -2.29
SNX2-208ENST00000509281 NMES1Q9C002 83 aa0.77□□□□□ -2.29
SNX2-208ENST00000509281 CYSTM1Q9H1C7 97 aa0.77□□□□□ -2.29
SNX2-208ENST00000509281 NAA60Q9H7X0 242 aa0.77□□□□□ -2.29
SNX2-208ENST00000509281 XAGE1AQ9HD64 81 aa0.77□□□□□ -2.29
SNX2-208ENST00000509281 C8orf4Q9NR00 106 aa0.77□□□□□ -2.29
SNX2-208ENST00000509281 GSKIPQ9P0R6 139 aa0.77□□□□□ -2.29
SNX2-208ENST00000509281 CACFD1Q9UGQ2 172 aa0.77□□□□□ -2.29
SNX2-208ENST00000509281 NAT8Q9UHE5 227 aa0.77□□□□□ -2.29
SNX2-208ENST00000509281 PKHD1L1Q86WI1 4243 aa0.77□□□□□ -2.29
SNX2-208ENST00000509281 LPAP08519 4548 aa0.76□□□□□ -2.29
SNX2-208ENST00000509281 A0A087WWC5 75 aa0.76□□□□□ -2.29
SNX2-208ENST00000509281 A0A087WX48 190 aa0.76□□□□□ -2.29
SNX2-208ENST00000509281 FAM24AA6NFZ4 105 aa0.76□□□□□ -2.29
SNX2-208ENST00000509281 CST7O76096 145 aa0.76□□□□□ -2.29
SNX2-208ENST00000509281 SFT2D2O95562 160 aa0.76□□□□□ -2.29
SNX2-208ENST00000509281 PPBPP02775 128 aa0.76□□□□□ -2.29
SNX2-208ENST00000509281 ANGP03950 147 aaKnown RBP0.76□□□□□ -2.29
SNX2-208ENST00000509281 AKAIN1P0CW23 69 aa0.76□□□□□ -2.29
SNX2-208ENST00000509281 ZNF80P51504 273 aaPredicted RBP0.76□□□□□ -2.29
SNX2-208ENST00000509281 TMEM258P61165 79 aa0.76□□□□□ -2.29
SNX2-208ENST00000509281 VBP1P61758 197 aa0.76□□□□□ -2.29
SNX2-208ENST00000509281 RPL19P84098 196 aaKnown RBP0.76□□□□□ -2.29
SNX2-208ENST00000509281 Q0VG73 95 aa0.76□□□□□ -2.29
SNX2-208ENST00000509281 ELOBQ15370 118 aa0.76□□□□□ -2.29
SNX2-208ENST00000509281 RHOHQ15669 191 aa0.76□□□□□ -2.29
SNX2-208ENST00000509281 NEDD8Q15843 81 aa0.76□□□□□ -2.29
SNX2-208ENST00000509281 KRTAP26-1Q6PEX3 210 aa0.76□□□□□ -2.29
SNX2-208ENST00000509281 CLPSL2Q6UWE3 100 aa0.76□□□□□ -2.29
SNX2-208ENST00000509281 LCN15Q6UWW0 184 aa0.76□□□□□ -2.29
SNX2-208ENST00000509281 MIR17HGQ75NE6 70 aa0.76□□□□□ -2.29
SNX2-208ENST00000509281 LINC00269Q8N2A0 174 aa0.76□□□□□ -2.29
SNX2-208ENST00000509281 Q8TAT8 98 aa0.76□□□□□ -2.29
SNX2-208ENST00000509281 ODF3Q96PU9 254 aa0.76□□□□□ -2.29
SNX2-208ENST00000509281 CIB3Q96Q77 187 aaPredicted RBP0.76□□□□□ -2.29
SNX2-208ENST00000509281 MGST2Q99735 147 aa0.76□□□□□ -2.29
SNX2-208ENST00000509281 MIXL1Q9H2W2 232 aa0.76□□□□□ -2.29
SNX2-208ENST00000509281 PLAC8Q9NZF1 115 aa0.76□□□□□ -2.29
SNX2-208ENST00000509281 TP73-AS1Q9UF72 201 aa0.76□□□□□ -2.29
SNX2-208ENST00000509281 SCP2D1Q9UJQ7 156 aa0.76□□□□□ -2.29
SNX2-208ENST00000509281 TGIF2-C20orf24A0A0A6YYL0 155 aa0.75□□□□□ -2.29
SNX2-208ENST00000509281 TRAV26-2A0A0B4J265 109 aa0.75□□□□□ -2.29
SNX2-208ENST00000509281 TRAV21A0A0B4J279 112 aa0.75□□□□□ -2.29
SNX2-208ENST00000509281 TRBV6-5A0A0K0K1A5 114 aa0.75□□□□□ -2.29
SNX2-208ENST00000509281 C9orf170A2RU37 121 aa0.75□□□□□ -2.29
SNX2-208ENST00000509281 HMSDA8MTL9 139 aa0.75□□□□□ -2.29
SNX2-208ENST00000509281 F6UZH7 168 aa0.75□□□□□ -2.29
SNX2-208ENST00000509281 SSSCA1O60232 199 aa0.75□□□□□ -2.29
SNX2-208ENST00000509281 TCRBP04435 133 aa0.75□□□□□ -2.29
SNX2-208ENST00000509281 SRP19P09132 144 aaKnown RBP0.75□□□□□ -2.29
SNX2-208ENST00000509281 ARMS2P0C7Q2 107 aa0.75□□□□□ -2.29
SNX2-208ENST00000509281 MGST1P10620 155 aaKnown RBP0.75□□□□□ -2.29
SNX2-208ENST00000509281 FGF6P10767 208 aa0.75□□□□□ -2.29
SNX2-208ENST00000509281 SLC25A6P12236 298 aa0.75□□□□□ -2.29
SNX2-208ENST00000509281 FGF7P21781 194 aa0.75□□□□□ -2.29
SNX2-208ENST00000509281 S100A4P26447 101 aaKnown RBP0.75□□□□□ -2.29
SNX2-208ENST00000509281 CSN1S1P47710 185 aa0.75□□□□□ -2.29
SNX2-208ENST00000509281 NCS1P62166 190 aa0.75□□□□□ -2.29
SNX2-208ENST00000509281 GNG5P63218 68 aa0.75□□□□□ -2.29
SNX2-208ENST00000509281 PMAIP1Q13794 54 aa0.75□□□□□ -2.29
SNX2-208ENST00000509281 CIRBPQ14011 172 aaKnown RBP0.75□□□□□ -2.29
SNX2-208ENST00000509281 IAH1Q2TAA2 248 aaPredicted RBP0.75□□□□□ -2.29
SNX2-208ENST00000509281 TMEM128Q5BJH2 165 aa0.75□□□□□ -2.29
SNX2-208ENST00000509281 C1orf137Q5JT78 98 aa0.75□□□□□ -2.29
SNX2-208ENST00000509281 Q6AWC8 147 aa0.75□□□□□ -2.29
SNX2-208ENST00000509281 TMEM14EPQ6UXP3 125 aa0.75□□□□□ -2.29
SNX2-208ENST00000509281 C7orf65Q6ZTY9 151 aa0.75□□□□□ -2.29
SNX2-208ENST00000509281 GOLT1AQ6ZVE7 132 aa0.75□□□□□ -2.29
SNX2-208ENST00000509281 FP248Q71RG6 208 aaPredicted RBP0.75□□□□□ -2.29
SNX2-208ENST00000509281 SLC51BQ86UW2 128 aa0.75□□□□□ -2.29
SNX2-208ENST00000509281 MCFD2Q8NI22 146 aa0.75□□□□□ -2.29
SNX2-208ENST00000509281 LINC00526Q96FQ7 95 aa0.75□□□□□ -2.29
SNX2-208ENST00000509281 FAM167A-AS1Q96KT0 104 aa0.75□□□□□ -2.29
SNX2-208ENST00000509281 PRRT1Q99946 306 aa0.75□□□□□ -2.29
SNX2-208ENST00000509281 NAA38Q9BRA0 125 aaKnown RBP0.75□□□□□ -2.29
SNX2-208ENST00000509281 SH3BGRL3Q9H299 93 aa0.75□□□□□ -2.29
SNX2-208ENST00000509281 SLC39A9Q9NUM3 307 aa0.75□□□□□ -2.29
SNX2-208ENST00000509281 TMEM14CQ9P0S9 112 aa0.75□□□□□ -2.29
SNX2-208ENST00000509281 RSL24D1Q9UHA3 163 aaKnown RBP0.75□□□□□ -2.29
SNX2-208ENST00000509281 LSM5Q9Y4Y9 91 aaKnown RBP0.75□□□□□ -2.29
SNX2-208ENST00000509281 FSIP2Q5CZC0 6907 aa0.75□□□□□ -2.29
SNX2-208ENST00000509281 TRBV7-3A0A075B6L6 115 aa0.74□□□□□ -2.29
SNX2-208ENST00000509281 A0A096LNI7 61 aa0.74□□□□□ -2.29
SNX2-208ENST00000509281 TRBV6-8A0A0A6YYG3 113 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms