RNA–Protein interactions for RNA: ENST00000508800.1

NEDD9-212, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-212ENST00000508800 K7EN84 100 aa6.18□□□□□ -1.42
NEDD9-212ENST00000508800 GATCO43716 136 aaKnown RBP6.18□□□□□ -1.42
NEDD9-212ENST00000508800 Q8NBF4 154 aa6.18□□□□□ -1.42
NEDD9-212ENST00000508800 TOMM7Q9P0U1 55 aa6.18□□□□□ -1.42
NEDD9-212ENST00000508800 MACF1Q9UPN3 7388 aaKnown RBP6.17□□□□□ -1.42
NEDD9-212ENST00000508800 ARPC5O15511 151 aa6.17□□□□□ -1.42
NEDD9-212ENST00000508800 IFI27P40305 119 aaPredicted RBP6.17□□□□□ -1.42
NEDD9-212ENST00000508800 CXCL5P42830 114 aa6.17□□□□□ -1.42
NEDD9-212ENST00000508800 FAM19A1Q7Z5A9 133 aa6.17□□□□□ -1.42
NEDD9-212ENST00000508800 MRPL18Q9H0U6 180 aaKnown RBP6.17□□□□□ -1.42
NEDD9-212ENST00000508800 ZNF706Q9Y5V0 76 aaPredicted RBP6.17□□□□□ -1.42
NEDD9-212ENST00000508800 IGKV2-28A0A075B6P5 120 aa6.16□□□□□ -1.42
NEDD9-212ENST00000508800 TMEM238LA0A1B0GVL6 79 aa6.16□□□□□ -1.42
NEDD9-212ENST00000508800 SMKR1H3BMG3 65 aa6.16□□□□□ -1.42
NEDD9-212ENST00000508800 SLC25A20O43772 301 aa6.16□□□□□ -1.42
NEDD9-212ENST00000508800 IGKV2D-28P01615 120 aa6.16□□□□□ -1.42
NEDD9-212ENST00000508800 COX6B2Q6YFQ2 88 aa6.16□□□□□ -1.42
NEDD9-212ENST00000508800 FAM231DQ6ZW35 169 aa6.16□□□□□ -1.42
NEDD9-212ENST00000508800 CBLN2Q8IUK8 224 aa6.16□□□□□ -1.42
NEDD9-212ENST00000508800 OCC1Q8TAD7 63 aa6.16□□□□□ -1.42
NEDD9-212ENST00000508800 ALKBH7Q9BT30 221 aaPredicted RBP6.16□□□□□ -1.42
NEDD9-212ENST00000508800 TRBV24-1A0A075B6N3 115 aa6.15□□□□□ -1.42
NEDD9-212ENST00000508800 LINC00862A6NCI5 91 aa6.15□□□□□ -1.42
NEDD9-212ENST00000508800 HIGD1CA8MV81 97 aa6.15□□□□□ -1.42
NEDD9-212ENST00000508800 EIF4EBP3O60516 100 aaPredicted RBP6.15□□□□□ -1.42
NEDD9-212ENST00000508800 CFC1P0CG37 223 aa6.15□□□□□ -1.42
NEDD9-212ENST00000508800 TAGLN2P37802 199 aaKnown RBP6.15□□□□□ -1.42
NEDD9-212ENST00000508800 ZNF345Q14585 488 aa6.15□□□□□ -1.42
NEDD9-212ENST00000508800 PCOTHQ58A44 107 aa6.15□□□□□ -1.42
NEDD9-212ENST00000508800 TMEM141Q96I45 108 aa6.15□□□□□ -1.42
NEDD9-212ENST00000508800 TMEM126AQ9H061 195 aa6.15□□□□□ -1.42
NEDD9-212ENST00000508800 GEMIN7Q9H840 131 aaKnown RBP6.15□□□□□ -1.42
NEDD9-212ENST00000508800 PYGO1Q9Y3Y4 419 aa6.15□□□□□ -1.42
NEDD9-212ENST00000508800 SYNE2Q8WXH0 6885 aaKnown RBP6.14□□□□□ -1.43
NEDD9-212ENST00000508800 TEX43Q6ZNM6 134 aa6.14□□□□□ -1.43
NEDD9-212ENST00000508800 Q8N377 158 aa6.14□□□□□ -1.43
NEDD9-212ENST00000508800 SPRR4Q96PI1 79 aa6.14□□□□□ -1.43
NEDD9-212ENST00000508800 C2orf88Q9BSF0 95 aa6.14□□□□□ -1.43
NEDD9-212ENST00000508800 SMIM2Q9BVW6 85 aa6.13□□□□□ -1.43
NEDD9-212ENST00000508800 IGLV4-3A0A075B6K6 122 aa6.12□□□□□ -1.43
NEDD9-212ENST00000508800 RIGQ13278 110 aa6.12□□□□□ -1.43
NEDD9-212ENST00000508800 HIGD2AQ9BW72 106 aa6.12□□□□□ -1.43
NEDD9-212ENST00000508800 LINC01551Q86U37 167 aa6.11□□□□□ -1.43
NEDD9-212ENST00000508800 EIF5A2Q9GZV4 153 aaKnown RBP6.11□□□□□ -1.43
NEDD9-212ENST00000508800 M0R378 163 aa6.1□□□□□ -1.43
NEDD9-212ENST00000508800 SEC11AP67812 179 aa6.1□□□□□ -1.43
NEDD9-212ENST00000508800 FAM104BQ5XKR9 115 aa6.1□□□□□ -1.43
NEDD9-212ENST00000508800 KANTRA0A1W2PQU2 76 aa6.09□□□□□ -1.43
NEDD9-212ENST00000508800 TMEM238C9JI98 176 aa6.09□□□□□ -1.43
NEDD9-212ENST00000508800 RAB5AP20339 215 aa6.09□□□□□ -1.43
NEDD9-212ENST00000508800 CKS2P33552 79 aa6.09□□□□□ -1.43
NEDD9-212ENST00000508800 MRPL51Q4U2R6 128 aaKnown RBP6.09□□□□□ -1.43
NEDD9-212ENST00000508800 FAM19A3Q7Z5A8 133 aa6.09□□□□□ -1.43
NEDD9-212ENST00000508800 NPSP0C0P6 89 aa6.08□□□□□ -1.44
NEDD9-212ENST00000508800 HERVK_113P63121 156 aa6.08□□□□□ -1.44
NEDD9-212ENST00000508800 TMEM250H0YL14 139 aa6.07□□□□□ -1.44
NEDD9-212ENST00000508800 SSBP3-AS1Q7Z2R9 100 aa6.06□□□□□ -1.44
NEDD9-212ENST00000508800 AMELXQ99217 191 aa6.06□□□□□ -1.44
NEDD9-212ENST00000508800 VCX2Q9H322 139 aa6.06□□□□□ -1.44
NEDD9-212ENST00000508800 A0A1B0GW15 77 aa6.05□□□□□ -1.44
NEDD9-212ENST00000508800 SCO1O75880 301 aa6.05□□□□□ -1.44
NEDD9-212ENST00000508800 RPL24P83731 157 aaKnown RBP6.05□□□□□ -1.44
NEDD9-212ENST00000508800 CDKN2A-AS1Q9UH64 79 aa6.05□□□□□ -1.44
NEDD9-212ENST00000508800 HMSDA8MTL9 139 aa6.04□□□□□ -1.44
NEDD9-212ENST00000508800 KRTAP4-16G5E9R7 235 aaPredicted RBP6.04□□□□□ -1.44
NEDD9-212ENST00000508800 PPBPP02775 128 aa6.04□□□□□ -1.44
NEDD9-212ENST00000508800 VPREB1P12018 145 aa6.04□□□□□ -1.44
NEDD9-212ENST00000508800 C2orf66Q6UXQ4 117 aa6.04□□□□□ -1.44
NEDD9-212ENST00000508800 OSTCQ9NRP0 149 aa6.04□□□□□ -1.44
NEDD9-212ENST00000508800 D6R8Y8 96 aa6.03□□□□□ -1.44
NEDD9-212ENST00000508800 RAB5BP61020 215 aa6.03□□□□□ -1.44
NEDD9-212ENST00000508800 LINC00483Q53H64 154 aa6.03□□□□□ -1.44
NEDD9-212ENST00000508800 PDZD11Q5EBL8 140 aa6.03□□□□□ -1.44
NEDD9-212ENST00000508800 PAPPA-AS1Q5QFB9 102 aa6.03□□□□□ -1.44
NEDD9-212ENST00000508800 KRTAP19-1Q8IUB9 90 aa6.03□□□□□ -1.44
NEDD9-212ENST00000508800 COX7B2Q8TF08 81 aa6.03□□□□□ -1.44
NEDD9-212ENST00000508800 NAT8BQ9UHF3 227 aa6.03□□□□□ -1.44
NEDD9-212ENST00000508800 CYSLTR1Q9Y271 337 aa6.03□□□□□ -1.44
NEDD9-212ENST00000508800 NPYP01303 97 aa6.02□□□□□ -1.45
NEDD9-212ENST00000508800 MOBPQ13875 183 aa6.02□□□□□ -1.45
NEDD9-212ENST00000508800 SMIM1B2RUZ4 78 aa6.01□□□□□ -1.45
NEDD9-212ENST00000508800 F8W036 122 aa6.01□□□□□ -1.45
NEDD9-212ENST00000508800 S100A8P05109 93 aa6.01□□□□□ -1.45
NEDD9-212ENST00000508800 AKAP14Q86UN6 197 aa6.01□□□□□ -1.45
NEDD9-212ENST00000508800 ATP5LO75964 103 aa6□□□□□ -1.45
NEDD9-212ENST00000508800 FAM74A3Q4VXF1 159 aa5.99□□□□□ -1.45
NEDD9-212ENST00000508800 ZC2HC1BQ5TFG8 222 aa5.99□□□□□ -1.45
NEDD9-212ENST00000508800 LINC00846Q9NV44 126 aa5.99□□□□□ -1.45
NEDD9-212ENST00000508800 V9GYV3 84 aa5.99□□□□□ -1.45
NEDD9-212ENST00000508800 IGLV9-49A0A0B4J1Y8 123 aa5.98□□□□□ -1.45
NEDD9-212ENST00000508800 ORMDL3Q8N138 153 aa5.98□□□□□ -1.45
NEDD9-212ENST00000508800 SMIM7Q9BQ49 75 aa5.98□□□□□ -1.45
NEDD9-212ENST00000508800 SND1-IT1Q9HBX3 110 aa5.98□□□□□ -1.45
NEDD9-212ENST00000508800 C9orf92A6NGG3 77 aa5.97□□□□□ -1.45
NEDD9-212ENST00000508800 SMLR1H3BR10 107 aa5.97□□□□□ -1.45
NEDD9-212ENST00000508800 IGIPA6NJ69 53 aa5.96□□□□□ -1.46
NEDD9-212ENST00000508800 PRSS47A8MTI9 375 aa5.96□□□□□ -1.46
NEDD9-212ENST00000508800 K7EMI3 77 aa5.96□□□□□ -1.46
NEDD9-212ENST00000508800 PFN2P35080 140 aa5.96□□□□□ -1.46
NEDD9-212ENST00000508800 CEBPGP53567 150 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms