RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 VCX2Q9H322 139 aa2.35□□□□□ -2.03
HMGN1P11-201ENST00000508668 MAP1LC3AQ9H492 121 aa2.35□□□□□ -2.03
HMGN1P11-201ENST00000508668 GEMIN7Q9H840 131 aaKnown RBP2.35□□□□□ -2.03
HMGN1P11-201ENST00000508668 SPANXA1Q9NS26 97 aa2.35□□□□□ -2.03
HMGN1P11-201ENST00000508668 TOMM7Q9P0U1 55 aa2.35□□□□□ -2.03
HMGN1P11-201ENST00000508668 NAT8Q9UHE5 227 aa2.35□□□□□ -2.03
HMGN1P11-201ENST00000508668 PSORS1C2Q9UIG4 136 aa2.35□□□□□ -2.03
HMGN1P11-201ENST00000508668 CSDC2Q9Y534 153 aaKnown RBP2.35□□□□□ -2.03
HMGN1P11-201ENST00000508668 G3V3Q6 166 aa2.34□□□□□ -2.03
HMGN1P11-201ENST00000508668 SMKR1H3BMG3 65 aa2.34□□□□□ -2.03
HMGN1P11-201ENST00000508668 PANO1I0J062 215 aa2.34□□□□□ -2.03
HMGN1P11-201ENST00000508668 K7EN84 100 aa2.34□□□□□ -2.03
HMGN1P11-201ENST00000508668 HNRNPA3P51991 378 aaKnown RBP2.34□□□□□ -2.03
HMGN1P11-201ENST00000508668 FOXA3P55318 350 aaPredicted RBP2.34□□□□□ -2.03
HMGN1P11-201ENST00000508668 SRSF9Q13242 221 aaKnown RBP eCLIP2.34□□□□□ -2.03
HMGN1P11-201ENST00000508668 PRR4Q16378 134 aa2.34□□□□□ -2.03
HMGN1P11-201ENST00000508668 ORMDL2Q53FV1 153 aa2.34□□□□□ -2.03
HMGN1P11-201ENST00000508668 RNASE13Q5GAN3 156 aaKnown RBP2.34□□□□□ -2.03
HMGN1P11-201ENST00000508668 LCE1FQ5T754 118 aa2.34□□□□□ -2.03
HMGN1P11-201ENST00000508668 MRPL54Q6P161 138 aaKnown RBP2.34□□□□□ -2.03
HMGN1P11-201ENST00000508668 KRTAP26-1Q6PEX3 210 aa2.34□□□□□ -2.03
HMGN1P11-201ENST00000508668 TMEM136Q6ZRR5 245 aa2.34□□□□□ -2.03
HMGN1P11-201ENST00000508668 Q8NBF4 154 aa2.34□□□□□ -2.03
HMGN1P11-201ENST00000508668 NUP35Q8NFH5 326 aa2.34□□□□□ -2.03
HMGN1P11-201ENST00000508668 ALKBH7Q9BT30 221 aaPredicted RBP2.34□□□□□ -2.03
HMGN1P11-201ENST00000508668 TIMM21Q9BVV7 248 aa2.34□□□□□ -2.03
HMGN1P11-201ENST00000508668 SMDT1Q9H4I9 107 aa2.34□□□□□ -2.03
HMGN1P11-201ENST00000508668 MRPL35Q9NZE8 188 aaKnown RBP2.34□□□□□ -2.03
HMGN1P11-201ENST00000508668 CYSLTR1Q9Y271 337 aa2.34□□□□□ -2.03
HMGN1P11-201ENST00000508668 UBE2D4Q9Y2X8 147 aa2.34□□□□□ -2.03
HMGN1P11-201ENST00000508668 LRP1BQ9NZR2 4599 aa2.34□□□□□ -2.04
HMGN1P11-201ENST00000508668 HERC1Q15751 4861 aa2.33□□□□□ -2.04
HMGN1P11-201ENST00000508668 TRBV30A0A0K0K1B3 111 aa2.33□□□□□ -2.04
HMGN1P11-201ENST00000508668 LOC389332A0A1B0GUA5 103 aa2.33□□□□□ -2.04
HMGN1P11-201ENST00000508668 C5orf52A6NGY3 159 aa2.33□□□□□ -2.04
HMGN1P11-201ENST00000508668 D6R8Y8 96 aa2.33□□□□□ -2.04
HMGN1P11-201ENST00000508668 M0QXV9 152 aa2.33□□□□□ -2.04
HMGN1P11-201ENST00000508668 ATP6V1G1O75348 118 aa2.33□□□□□ -2.04
HMGN1P11-201ENST00000508668 MT-ND4LP03901 98 aa2.33□□□□□ -2.04
HMGN1P11-201ENST00000508668 S100PP25815 95 aa2.33□□□□□ -2.04
HMGN1P11-201ENST00000508668 POLR2KP53803 58 aaKnown RBP2.33□□□□□ -2.04
HMGN1P11-201ENST00000508668 S100A12P80511 92 aa2.33□□□□□ -2.04
HMGN1P11-201ENST00000508668 MRPL51Q4U2R6 128 aaKnown RBP2.33□□□□□ -2.04
HMGN1P11-201ENST00000508668 FAM104BQ5XKR9 115 aa2.33□□□□□ -2.04
HMGN1P11-201ENST00000508668 Q6ZUT4 128 aa2.33□□□□□ -2.04
HMGN1P11-201ENST00000508668 NKAPP1Q8N9T2 125 aa2.33□□□□□ -2.04
HMGN1P11-201ENST00000508668 TMEM141Q96I45 108 aa2.33□□□□□ -2.04
HMGN1P11-201ENST00000508668 PRELID3AQ96N28 172 aa2.33□□□□□ -2.04
HMGN1P11-201ENST00000508668 SMIM2Q9BVW6 85 aa2.33□□□□□ -2.04
HMGN1P11-201ENST00000508668 SMCO4Q9NRQ5 59 aa2.33□□□□□ -2.04
HMGN1P11-201ENST00000508668 IGLV1-50A0A075B6I6 118 aa2.32□□□□□ -2.04
HMGN1P11-201ENST00000508668 LINC01549A6NIU2 74 aa2.32□□□□□ -2.04
HMGN1P11-201ENST00000508668 NDUFC2-KCTD14E9PQ53 114 aa2.32□□□□□ -2.04
HMGN1P11-201ENST00000508668 H3BRM9 83 aa2.32□□□□□ -2.04
HMGN1P11-201ENST00000508668 K7EMI3 77 aa2.32□□□□□ -2.04
HMGN1P11-201ENST00000508668 NUPR1O60356 82 aa2.32□□□□□ -2.04
HMGN1P11-201ENST00000508668 IGLV7-43P04211 117 aa2.32□□□□□ -2.04
HMGN1P11-201ENST00000508668 SRP19P09132 144 aaKnown RBP2.32□□□□□ -2.04
HMGN1P11-201ENST00000508668 KRTAP5-9P26371 169 aa2.32□□□□□ -2.04
HMGN1P11-201ENST00000508668 CXCL5P42830 114 aa2.32□□□□□ -2.04
HMGN1P11-201ENST00000508668 RPL28P46779 137 aaKnown RBP2.32□□□□□ -2.04
HMGN1P11-201ENST00000508668 UBE2AP49459 152 aa2.32□□□□□ -2.04
HMGN1P11-201ENST00000508668 KRTAP10-4P60372 401 aaPredicted RBP2.32□□□□□ -2.04
HMGN1P11-201ENST00000508668 RPL23P62829 140 aaKnown RBP2.32□□□□□ -2.04
HMGN1P11-201ENST00000508668 HERVK_113P63121 156 aa2.32□□□□□ -2.04
HMGN1P11-201ENST00000508668 MRPS36P82909 103 aaKnown RBP2.32□□□□□ -2.04
HMGN1P11-201ENST00000508668 PHF5AQ7RTV0 110 aaKnown RBP2.32□□□□□ -2.04
HMGN1P11-201ENST00000508668 ATP5L2Q7Z4Y8 100 aa2.32□□□□□ -2.04
HMGN1P11-201ENST00000508668 LAMTOR2Q9Y2Q5 125 aa2.32□□□□□ -2.04
HMGN1P11-201ENST00000508668 TRBV24-1A0A075B6N3 115 aa2.31□□□□□ -2.04
HMGN1P11-201ENST00000508668 SMIM27A0A1W2PRY6 76 aa2.31□□□□□ -2.04
HMGN1P11-201ENST00000508668 H0Y9J4 135 aa2.31□□□□□ -2.04
HMGN1P11-201ENST00000508668 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.31□□□□□ -2.04
HMGN1P11-201ENST00000508668 ATP5LO75964 103 aa2.31□□□□□ -2.04
HMGN1P11-201ENST00000508668 NDUFA6P56556 154 aa2.31□□□□□ -2.04
HMGN1P11-201ENST00000508668 RPL39P62891 51 aaKnown RBP2.31□□□□□ -2.04
HMGN1P11-201ENST00000508668 RPL32P62910 135 aaKnown RBP2.31□□□□□ -2.04
HMGN1P11-201ENST00000508668 UNQ6190/PRO20217Q6UXQ8 127 aa2.31□□□□□ -2.04
HMGN1P11-201ENST00000508668 LINC00469Q8N7U9 141 aa2.31□□□□□ -2.04
HMGN1P11-201ENST00000508668 NXT2Q9NPJ8 142 aaKnown RBP2.31□□□□□ -2.04
HMGN1P11-201ENST00000508668 V9GYV3 84 aa2.31□□□□□ -2.04
HMGN1P11-201ENST00000508668 MYCBP2O75592 4640 aa2.3□□□□□ -2.04
HMGN1P11-201ENST00000508668 IGKV2D-26A0A0A0MRZ7 120 aa2.3□□□□□ -2.04
HMGN1P11-201ENST00000508668 A0A1W2PNN7 141 aa2.3□□□□□ -2.04
HMGN1P11-201ENST00000508668 F8VRH5 84 aa2.3□□□□□ -2.04
HMGN1P11-201ENST00000508668 NPYP01303 97 aa2.3□□□□□ -2.04
HMGN1P11-201ENST00000508668 TLX1NBP0CAT3 122 aa2.3□□□□□ -2.04
HMGN1P11-201ENST00000508668 CRYGAP11844 174 aa2.3□□□□□ -2.04
HMGN1P11-201ENST00000508668 C2orf66Q6UXQ4 117 aa2.3□□□□□ -2.04
HMGN1P11-201ENST00000508668 FA2HQ7L5A8 372 aa2.3□□□□□ -2.04
HMGN1P11-201ENST00000508668 LINC01561Q8N1V8 128 aa2.3□□□□□ -2.04
HMGN1P11-201ENST00000508668 Q8N8P6 123 aa2.3□□□□□ -2.04
HMGN1P11-201ENST00000508668 TYMSOSQ8TAI1 123 aa2.3□□□□□ -2.04
HMGN1P11-201ENST00000508668 SCGB3A1Q96QR1 104 aa2.3□□□□□ -2.04
HMGN1P11-201ENST00000508668 CARHSP1Q9Y2V2 147 aaKnown RBP2.3□□□□□ -2.04
HMGN1P11-201ENST00000508668 IGHV3OR16-9A0A0B4J2B5 98 aa2.29□□□□□ -2.04
HMGN1P11-201ENST00000508668 ZNF861PO60384 105 aa2.29□□□□□ -2.04
HMGN1P11-201ENST00000508668 TSPAN13O95857 204 aa2.29□□□□□ -2.04
HMGN1P11-201ENST00000508668 MT1HL1P0DM35 61 aa2.29□□□□□ -2.04
HMGN1P11-201ENST00000508668 RAB5BP61020 215 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms