RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 PRO0255Q9UI72 69 aa10.05□□□□□ -0.8
DDX41-208ENST00000507955 SHISA2Q6UWI4 295 aa10.05□□□□□ -0.8
DDX41-208ENST00000507955 DEFB121Q5J5C9 76 aa10.04□□□□□ -0.8
DDX41-208ENST00000507955 COX7B2Q8TF08 81 aa10.04□□□□□ -0.8
DDX41-208ENST00000507955 LINC00959A0A1B0GUT2 108 aa10.04□□□□□ -0.8
DDX41-208ENST00000507955 COX7A2LO14548 114 aa10.03□□□□□ -0.8
DDX41-208ENST00000507955 TENM3Q9P273 2699 aa10.03□□□□□ -0.8
DDX41-208ENST00000507955 NDUFV3P56181 108 aaKnown RBP10.03□□□□□ -0.8
DDX41-208ENST00000507955 OXLD1Q5BKU9 147 aa10.03□□□□□ -0.8
DDX41-208ENST00000507955 NOTCH1P46531 2555 aa10.03□□□□□ -0.8
DDX41-208ENST00000507955 IGLV10-54A0A075B6I4 117 aa10.03□□□□□ -0.8
DDX41-208ENST00000507955 IGHV4-30-4P0DP06 118 aa10.03□□□□□ -0.8
DDX41-208ENST00000507955 FAM218AQ96MZ4 157 aa10.03□□□□□ -0.8
DDX41-208ENST00000507955 SMIM9A6NGZ8 99 aa10.02□□□□□ -0.81
DDX41-208ENST00000507955 PFN2P35080 140 aa10.02□□□□□ -0.81
DDX41-208ENST00000507955 MIR7-3HGQ8N6C7 128 aa10.02□□□□□ -0.81
DDX41-208ENST00000507955 DAD1P61803 113 aa10.02□□□□□ -0.81
DDX41-208ENST00000507955 Q8NAQ8 132 aa10.01□□□□□ -0.81
DDX41-208ENST00000507955 LINC00269Q8N2A0 174 aa10.01□□□□□ -0.81
DDX41-208ENST00000507955 C22orf24Q9Y442 160 aa10.01□□□□□ -0.81
DDX41-208ENST00000507955 APOC4P55056 127 aa10□□□□□ -0.81
DDX41-208ENST00000507955 LINC00158P58513 81 aa10□□□□□ -0.81
DDX41-208ENST00000507955 A0A087WZ39 114 aa9.99□□□□□ -0.81
DDX41-208ENST00000507955 LYRM9A8MSI8 78 aa9.99□□□□□ -0.81
DDX41-208ENST00000507955 Q6Q795 121 aa9.99□□□□□ -0.81
DDX41-208ENST00000507955 FAM240AA0A1B0GVK7 77 aa9.99□□□□□ -0.81
DDX41-208ENST00000507955 HERV-K104P63124 156 aa9.99□□□□□ -0.81
DDX41-208ENST00000507955 RETNQ9HD89 108 aa9.99□□□□□ -0.81
DDX41-208ENST00000507955 IGKV2-28A0A075B6P5 120 aa9.98□□□□□ -0.81
DDX41-208ENST00000507955 IGKV2D-28P01615 120 aa9.98□□□□□ -0.81
DDX41-208ENST00000507955 LINC00337Q8N6G1 96 aa9.98□□□□□ -0.81
DDX41-208ENST00000507955 CCDC179H3BU77 68 aa9.97□□□□□ -0.81
DDX41-208ENST00000507955 C6orf226Q5I0X4 101 aa9.97□□□□□ -0.81
DDX41-208ENST00000507955 WFDC9Q8NEX5 89 aa9.97□□□□□ -0.81
DDX41-208ENST00000507955 ANGP03950 147 aaKnown RBP9.96□□□□□ -0.81
DDX41-208ENST00000507955 CMYA5Q8N3K9 4069 aa9.96□□□□□ -0.81
DDX41-208ENST00000507955 COL6A5A8TX70 2615 aa9.96□□□□□ -0.82
DDX41-208ENST00000507955 B5MCH6 92 aa9.96□□□□□ -0.82
DDX41-208ENST00000507955 SMCR5Q8TEV8 140 aa9.96□□□□□ -0.82
DDX41-208ENST00000507955 COPS9Q8WXC6 57 aa9.96□□□□□ -0.82
DDX41-208ENST00000507955 A0A1B0GUV1 79 aa9.95□□□□□ -0.82
DDX41-208ENST00000507955 KRTAP10-11P60412 298 aa9.95□□□□□ -0.82
DDX41-208ENST00000507955 SS18Q15532 418 aa9.95□□□□□ -0.82
DDX41-208ENST00000507955 ATP5G1P05496 136 aa9.95□□□□□ -0.82
DDX41-208ENST00000507955 Q9HAA7 133 aa9.95□□□□□ -0.82
DDX41-208ENST00000507955 SND1-IT1Q9HBX3 110 aa9.95□□□□□ -0.82
DDX41-208ENST00000507955 SS18L2Q9UHA2 77 aa9.95□□□□□ -0.82
DDX41-208ENST00000507955 TRACP01848 142 aa9.94□□□□□ -0.82
DDX41-208ENST00000507955 BAALC-AS2P0C853 105 aa9.94□□□□□ -0.82
DDX41-208ENST00000507955 CCL18P55774 89 aa9.94□□□□□ -0.82
DDX41-208ENST00000507955 MRPL23Q16540 153 aaKnown RBP9.94□□□□□ -0.82
DDX41-208ENST00000507955 LINC00526Q96FQ7 95 aa9.93□□□□□ -0.82
DDX41-208ENST00000507955 SPART-AS1P0CW21 52 aa9.93□□□□□ -0.82
DDX41-208ENST00000507955 MIFP14174 115 aa9.93□□□□□ -0.82
DDX41-208ENST00000507955 REG3AQ06141 175 aa9.92□□□□□ -0.82
DDX41-208ENST00000507955 C9orf116Q5BN46 136 aaPredicted RBP9.92□□□□□ -0.82
DDX41-208ENST00000507955 PPDPFQ9H3Y8 114 aa9.92□□□□□ -0.82
DDX41-208ENST00000507955 RPL28P46779 137 aaKnown RBP9.92□□□□□ -0.82
DDX41-208ENST00000507955 CHCHD10Q8WYQ3 142 aaPredicted RBP9.92□□□□□ -0.82
DDX41-208ENST00000507955 CRPP02741 224 aa9.91□□□□□ -0.82
DDX41-208ENST00000507955 PRR3P79522 188 aaKnown RBP9.91□□□□□ -0.82
DDX41-208ENST00000507955 KRTAP24-1Q3LI83 254 aa9.91□□□□□ -0.82
DDX41-208ENST00000507955 NBEAL1Q6ZS30 2694 aa9.91□□□□□ -0.82
DDX41-208ENST00000507955 TRBV7-7A0A0K0K1E9 115 aa9.91□□□□□ -0.82
DDX41-208ENST00000507955 SMIM11BQ8TCY0 68 aa9.91□□□□□ -0.82
DDX41-208ENST00000507955 A0A087WYN8 130 aa9.9□□□□□ -0.82
DDX41-208ENST00000507955 TRAV13-2A0A0B4J235 113 aa9.9□□□□□ -0.82
DDX41-208ENST00000507955 C9orf129Q5T035 196 aaKnown RBP9.9□□□□□ -0.82
DDX41-208ENST00000507955 IBA57-AS1B1ANH7 110 aa9.89□□□□□ -0.83
DDX41-208ENST00000507955 KLK12Q9UKR0 248 aa9.88□□□□□ -0.83
DDX41-208ENST00000507955 C6orf223Q8N319 242 aa9.88□□□□□ -0.83
DDX41-208ENST00000507955 ACYP1P07311 99 aa9.87□□□□□ -0.83
DDX41-208ENST00000507955 MALP21145 153 aa9.87□□□□□ -0.83
DDX41-208ENST00000507955 KIAA0087Q14695 138 aa9.87□□□□□ -0.83
DDX41-208ENST00000507955 CD164L2Q6UWJ8 174 aa9.87□□□□□ -0.83
DDX41-208ENST00000507955 OR13C6PQ8NH95 151 aa9.87□□□□□ -0.83
DDX41-208ENST00000507955 WIPF1O43516 503 aa9.86□□□□□ -0.83
DDX41-208ENST00000507955 SDIM1Q6ZPB5 146 aa9.86□□□□□ -0.83
DDX41-208ENST00000507955 CFAP161Q6P656 301 aa9.86□□□□□ -0.83
DDX41-208ENST00000507955 Q8IZM0 81 aa9.86□□□□□ -0.83
DDX41-208ENST00000507955 FAM236AA0A1B0GUQ0 79 aa9.85□□□□□ -0.83
DDX41-208ENST00000507955 FAM236BA0A1B0GV22 79 aa9.85□□□□□ -0.83
DDX41-208ENST00000507955 C10orf25Q5T742 122 aa9.85□□□□□ -0.83
DDX41-208ENST00000507955 Q6ZTC4 211 aa9.85□□□□□ -0.83
DDX41-208ENST00000507955 PRB2P02812 416 aaPredicted RBP9.84□□□□□ -0.83
DDX41-208ENST00000507955 GAGE2AQ6NT46 116 aa9.84□□□□□ -0.83
DDX41-208ENST00000507955 LYPD5Q6UWN5 251 aa9.84□□□□□ -0.83
DDX41-208ENST00000507955 C3orf56Q8N813 242 aa9.84□□□□□ -0.83
DDX41-208ENST00000507955 LELP1Q5T871 98 aa9.83□□□□□ -0.84
DDX41-208ENST00000507955 LINC00643Q86TS7 51 aa9.83□□□□□ -0.84
DDX41-208ENST00000507955 Q8NDZ9 215 aa9.83□□□□□ -0.84
DDX41-208ENST00000507955 ENHOQ6UWT2 76 aa9.82□□□□□ -0.84
DDX41-208ENST00000507955 UNQ6190/PRO20217Q6UXQ8 127 aa9.82□□□□□ -0.84
DDX41-208ENST00000507955 WFDC10BQ8IUB3 73 aa9.82□□□□□ -0.84
DDX41-208ENST00000507955 CYSRT1A8MQ03 144 aa9.81□□□□□ -0.84
DDX41-208ENST00000507955 LECT2O14960 151 aa9.81□□□□□ -0.84
DDX41-208ENST00000507955 SLPIP03973 132 aa9.81□□□□□ -0.84
DDX41-208ENST00000507955 C14orf132Q9NPU4 83 aa9.81□□□□□ -0.84
DDX41-208ENST00000507955 BAHCC1Q9P281 2608 aa9.81□□□□□ -0.84
DDX41-208ENST00000507955 DNAL4O96015 105 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms