RNA–Protein interactions for RNA: ENST00000507906.5

USP53-204, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 4

Gene USP53, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-204ENST00000507906 UBE2D1P51668 147 aa1.11□□□□□ -2.23
USP53-204ENST00000507906 EFNA4P52798 201 aa1.11□□□□□ -2.23
USP53-204ENST00000507906 FXYD4P59646 89 aa1.11□□□□□ -2.23
USP53-204ENST00000507906 UBE2D3P61077 147 aa1.11□□□□□ -2.23
USP53-204ENST00000507906 UBE2D2P62837 147 aa1.11□□□□□ -2.23
USP53-204ENST00000507906 FXYD3Q14802 87 aa1.11□□□□□ -2.23
USP53-204ENST00000507906 ZNF818PQ6ZRF7 136 aa1.11□□□□□ -2.23
USP53-204ENST00000507906 C6orf201Q7Z4U5 140 aa1.11□□□□□ -2.23
USP53-204ENST00000507906 MYOZ3Q8TDC0 251 aa1.11□□□□□ -2.23
USP53-204ENST00000507906 CNTRLQ7Z7A1 2325 aa1.1□□□□□ -2.23
USP53-204ENST00000507906 TRBV25-1A0A075B6N4 114 aa1.1□□□□□ -2.23
USP53-204ENST00000507906 TRAV23DV6A0A075B6W5 121 aa1.1□□□□□ -2.23
USP53-204ENST00000507906 K7EMI3 77 aa1.1□□□□□ -2.23
USP53-204ENST00000507906 UQCRQO14949 82 aa1.1□□□□□ -2.23
USP53-204ENST00000507906 STATHP02808 62 aa1.1□□□□□ -2.23
USP53-204ENST00000507906 ASIPP42127 132 aa1.1□□□□□ -2.23
USP53-204ENST00000507906 SNRPD3P62318 126 aaKnown RBP1.1□□□□□ -2.23
USP53-204ENST00000507906 DEFB121Q5J5C9 76 aa1.1□□□□□ -2.23
USP53-204ENST00000507906 PSMG4Q5JS54 123 aa1.1□□□□□ -2.23
USP53-204ENST00000507906 C9orf153Q5TBE3 101 aa1.1□□□□□ -2.23
USP53-204ENST00000507906 DPH3Q96FX2 82 aa1.1□□□□□ -2.23
USP53-204ENST00000507906 MGST2Q99735 147 aa1.1□□□□□ -2.23
USP53-204ENST00000507906 SPANXCQ9NY87 97 aa1.1□□□□□ -2.23
USP53-204ENST00000507906 PTPRQQ9UMZ3 2332 aa1.1□□□□□ -2.23
USP53-204ENST00000507906 FCGBPQ9Y6R7 5405 aaPredicted RBP1.1□□□□□ -2.23
USP53-204ENST00000507906 FLG2Q5D862 2391 aaPredicted RBP1.1□□□□□ -2.23
USP53-204ENST00000507906 MUC4Q99102 2169 aa1.09□□□□□ -2.23
USP53-204ENST00000507906 PIGBOS1A0A0B4J2F0 54 aa1.09□□□□□ -2.23
USP53-204ENST00000507906 MYMXA0A1B0GTQ4 84 aa1.09□□□□□ -2.23
USP53-204ENST00000507906 CXorf51AA0A1B0GTR3 108 aa1.09□□□□□ -2.23
USP53-204ENST00000507906 FAM236AA0A1B0GUQ0 79 aa1.09□□□□□ -2.23
USP53-204ENST00000507906 FAM236BA0A1B0GV22 79 aa1.09□□□□□ -2.23
USP53-204ENST00000507906 LINC01546A6NGU7 62 aa1.09□□□□□ -2.23
USP53-204ENST00000507906 A6NN06 94 aa1.09□□□□□ -2.23
USP53-204ENST00000507906 OOSP1A8MZH6 123 aa1.09□□□□□ -2.23
USP53-204ENST00000507906 SNCGO76070 127 aa1.09□□□□□ -2.23
USP53-204ENST00000507906 IGKCP01834 107 aa1.09□□□□□ -2.23
USP53-204ENST00000507906 EDDM3BP56851 147 aa1.09□□□□□ -2.23
USP53-204ENST00000507906 PLGLB1Q02325 96 aa1.09□□□□□ -2.23
USP53-204ENST00000507906 PIGYQ3MUY2 71 aa1.09□□□□□ -2.23
USP53-204ENST00000507906 MIC13Q5XKP0 118 aa1.09□□□□□ -2.23
USP53-204ENST00000507906 CSAG1Q6PB30 78 aa1.09□□□□□ -2.23
USP53-204ENST00000507906 C5orf38Q86SI9 138 aa1.09□□□□□ -2.23
USP53-204ENST00000507906 IFI27L1Q96BM0 104 aa1.09□□□□□ -2.23
USP53-204ENST00000507906 F5P12259 2224 aa1.09□□□□□ -2.24
USP53-204ENST00000507906 DNAJC13O75165 2243 aa1.08□□□□□ -2.24
USP53-204ENST00000507906 ASXL3Q9C0F0 2248 aa1.08□□□□□ -2.24
USP53-204ENST00000507906 TRAV2A0A0B4J234 112 aa1.08□□□□□ -2.24
USP53-204ENST00000507906 TRAV17A0A0B4J275 112 aa1.08□□□□□ -2.24
USP53-204ENST00000507906 hADV29S1A0JD25 119 aa1.08□□□□□ -2.24
USP53-204ENST00000507906 LINC01549A6NIU2 74 aa1.08□□□□□ -2.24
USP53-204ENST00000507906 HIGD1CA8MV81 97 aa1.08□□□□□ -2.24
USP53-204ENST00000507906 M0R135 149 aa1.08□□□□□ -2.24
USP53-204ENST00000507906 ZNF137PP52743 207 aa1.08□□□□□ -2.24
USP53-204ENST00000507906 COX14Q96I36 57 aa1.08□□□□□ -2.24
USP53-204ENST00000507906 FAM167A-AS1Q96KT0 104 aa1.08□□□□□ -2.24
USP53-204ENST00000507906 TRGV9Q99603 122 aa1.08□□□□□ -2.24
USP53-204ENST00000507906 AGPAT4-IT1Q9H0P7 198 aa1.08□□□□□ -2.24
USP53-204ENST00000507906 TMEM167BQ9NRX6 74 aa1.08□□□□□ -2.24
USP53-204ENST00000507906 ABCA1O95477 2261 aa1.08□□□□□ -2.24
USP53-204ENST00000507906 KIAA0100Q14667 2235 aaKnown RBP1.07□□□□□ -2.24
USP53-204ENST00000507906 KMT2BQ9UMN6 2715 aaPredicted RBP1.07□□□□□ -2.24
USP53-204ENST00000507906 IGLV3-32A0A0A0MS00 114 aa1.07□□□□□ -2.24
USP53-204ENST00000507906 TRBV6-1A0A0K0K1D8 114 aa1.07□□□□□ -2.24
USP53-204ENST00000507906 NCR3O14931 201 aa1.07□□□□□ -2.24
USP53-204ENST00000507906 ARMS2P0C7Q2 107 aa1.07□□□□□ -2.24
USP53-204ENST00000507906 COX6B1P14854 86 aa1.07□□□□□ -2.24
USP53-204ENST00000507906 FCER1GP30273 86 aa1.07□□□□□ -2.24
USP53-204ENST00000507906 IFI27P40305 119 aaPredicted RBP1.07□□□□□ -2.24
USP53-204ENST00000507906 SPINK9Q5DT21 86 aa1.07□□□□□ -2.24
USP53-204ENST00000507906 TMEM170BQ5T4T1 132 aa1.07□□□□□ -2.24
USP53-204ENST00000507906 LINC00643Q86TS7 51 aa1.07□□□□□ -2.24
USP53-204ENST00000507906 NDUFA11Q86Y39 141 aa1.07□□□□□ -2.24
USP53-204ENST00000507906 Q8N8P6 123 aa1.07□□□□□ -2.24
USP53-204ENST00000507906 DSCR8Q96T75 97 aa1.07□□□□□ -2.24
USP53-204ENST00000507906 SPANXDQ9BXN6 97 aa1.07□□□□□ -2.24
USP53-204ENST00000507906 DPH3P1Q9H4G8 78 aa1.07□□□□□ -2.24
USP53-204ENST00000507906 PROK2Q9HC23 129 aa1.07□□□□□ -2.24
USP53-204ENST00000507906 SERP1Q9Y6X1 66 aa1.07□□□□□ -2.24
USP53-204ENST00000507906 ROS1P08922 2347 aa1.06□□□□□ -2.24
USP53-204ENST00000507906 KNL1Q8NG31 2342 aa1.06□□□□□ -2.24
USP53-204ENST00000507906 MED13LQ71F56 2210 aa1.06□□□□□ -2.24
USP53-204ENST00000507906 TRAV12-2A0A075B6T6 113 aa1.06□□□□□ -2.24
USP53-204ENST00000507906 TRBV7-1A0A0A6YYK4 115 aa1.06□□□□□ -2.24
USP53-204ENST00000507906 A0A0J9YY99 117 aa1.06□□□□□ -2.24
USP53-204ENST00000507906 TEX49A0A1B0GTD5 131 aa1.06□□□□□ -2.24
USP53-204ENST00000507906 A0A1B0GUT8 65 aa1.06□□□□□ -2.24
USP53-204ENST00000507906 D6R8Y8 96 aa1.06□□□□□ -2.24
USP53-204ENST00000507906 H0YGG7 62 aa1.06□□□□□ -2.24
USP53-204ENST00000507906 H3BVH4 76 aa1.06□□□□□ -2.24
USP53-204ENST00000507906 ATOX1O00244 68 aa1.06□□□□□ -2.24
USP53-204ENST00000507906 IGHV3-30P01768 117 aa1.06□□□□□ -2.24
USP53-204ENST00000507906 IGHV3-30-5P0DP03 117 aa1.06□□□□□ -2.24
USP53-204ENST00000507906 PYYP10082 97 aa1.06□□□□□ -2.24
USP53-204ENST00000507906 PCBD1P61457 104 aa1.06□□□□□ -2.24
USP53-204ENST00000507906 ZNF56Q15929 161 aa1.06□□□□□ -2.24
USP53-204ENST00000507906 C10orf128Q5T292 105 aa1.06□□□□□ -2.24
USP53-204ENST00000507906 SFTA2Q6UW10 78 aa1.06□□□□□ -2.24
USP53-204ENST00000507906 Q86TA4 180 aa1.06□□□□□ -2.24
USP53-204ENST00000507906 SERP2Q8N6R1 65 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms