RNA–Protein interactions for RNA: ENST00000507536.1

PDGFRA-205, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 1,146 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-205ENST00000507536 HBBP68871 147 aa6.12□□□□□ -1.43
PDGFRA-205ENST00000507536 LINC00242Q5T6M2 205 aa6.12□□□□□ -1.43
PDGFRA-205ENST00000507536 IGLV4-3A0A075B6K6 122 aa6.11□□□□□ -1.43
PDGFRA-205ENST00000507536 A0A1B0GXF2 115 aa6.11□□□□□ -1.43
PDGFRA-205ENST00000507536 CKS2P33552 79 aa6.11□□□□□ -1.43
PDGFRA-205ENST00000507536 RAB14P61106 215 aa6.11□□□□□ -1.43
PDGFRA-205ENST00000507536 PRR4Q16378 134 aa6.11□□□□□ -1.43
PDGFRA-205ENST00000507536 TGIF2-C20orf24A0A0A6YYL0 155 aa6.1□□□□□ -1.43
PDGFRA-205ENST00000507536 TRBV30A0A0K0K1B3 111 aa6.1□□□□□ -1.43
PDGFRA-205ENST00000507536 NDUFC2-KCTD14E9PQ53 114 aa6.1□□□□□ -1.43
PDGFRA-205ENST00000507536 ADIRFQ15847 76 aa6.1□□□□□ -1.43
PDGFRA-205ENST00000507536 LINC00173Q6ZV60 143 aa6.1□□□□□ -1.43
PDGFRA-205ENST00000507536 A0A1B0GW15 77 aa6.09□□□□□ -1.43
PDGFRA-205ENST00000507536 RPL13AP40429 203 aaKnown RBP6.09□□□□□ -1.43
PDGFRA-205ENST00000507536 UBE2D1P51668 147 aa6.09□□□□□ -1.43
PDGFRA-205ENST00000507536 UBE2BP63146 152 aa6.09□□□□□ -1.43
PDGFRA-205ENST00000507536 CLLU1Q5K131 121 aa6.09□□□□□ -1.43
PDGFRA-205ENST00000507536 MRPL54Q6P161 138 aaKnown RBP6.09□□□□□ -1.43
PDGFRA-205ENST00000507536 LINC00469Q8N7U9 141 aa6.09□□□□□ -1.43
PDGFRA-205ENST00000507536 PYGO1Q9Y3Y4 419 aa6.09□□□□□ -1.43
PDGFRA-205ENST00000507536 A0A087X002 238 aa6.08□□□□□ -1.44
PDGFRA-205ENST00000507536 ZC2HC1BQ5TFG8 222 aa6.08□□□□□ -1.44
PDGFRA-205ENST00000507536 LINC00518Q8N0U6 118 aa6.08□□□□□ -1.44
PDGFRA-205ENST00000507536 NAT8Q9UHE5 227 aa6.08□□□□□ -1.44
PDGFRA-205ENST00000507536 CARHSP1Q9Y2V2 147 aaKnown RBP6.08□□□□□ -1.44
PDGFRA-205ENST00000507536 MUC17Q685J3 4493 aa6.07□□□□□ -1.44
PDGFRA-205ENST00000507536 ZNF861PO60384 105 aa6.07□□□□□ -1.44
PDGFRA-205ENST00000507536 S100A6P06703 90 aa6.07□□□□□ -1.44
PDGFRA-205ENST00000507536 IFI27P40305 119 aaPredicted RBP6.07□□□□□ -1.44
PDGFRA-205ENST00000507536 COMMD7Q86VX2 200 aa6.07□□□□□ -1.44
PDGFRA-205ENST00000507536 TMEM141Q96I45 108 aa6.07□□□□□ -1.44
PDGFRA-205ENST00000507536 PPBPP02775 128 aa6.06□□□□□ -1.44
PDGFRA-205ENST00000507536 LINC01561Q8N1V8 128 aa6.06□□□□□ -1.44
PDGFRA-205ENST00000507536 C22orf24Q9Y442 160 aa6.06□□□□□ -1.44
PDGFRA-205ENST00000507536 F8W036 122 aa6.05□□□□□ -1.44
PDGFRA-205ENST00000507536 ORMDL3Q8N138 153 aa6.05□□□□□ -1.44
PDGFRA-205ENST00000507536 PACRGQ96M98 296 aaPredicted RBP6.05□□□□□ -1.44
PDGFRA-205ENST00000507536 PRELID3AQ96N28 172 aa6.05□□□□□ -1.44
PDGFRA-205ENST00000507536 AMELXQ99217 191 aa6.05□□□□□ -1.44
PDGFRA-205ENST00000507536 NUPR1O60356 82 aa6.04□□□□□ -1.44
PDGFRA-205ENST00000507536 TSPAN13O95857 204 aa6.04□□□□□ -1.44
PDGFRA-205ENST00000507536 S100A8P05109 93 aa6.04□□□□□ -1.44
PDGFRA-205ENST00000507536 TEX43Q6ZNM6 134 aa6.04□□□□□ -1.44
PDGFRA-205ENST00000507536 FAM19A3Q7Z5A8 133 aa6.04□□□□□ -1.44
PDGFRA-205ENST00000507536 XAGE1AQ9HD64 81 aa6.04□□□□□ -1.44
PDGFRA-205ENST00000507536 PCP4L1A6NKN8 68 aa6.03□□□□□ -1.44
PDGFRA-205ENST00000507536 RAB5AP20339 215 aa6.03□□□□□ -1.44
PDGFRA-205ENST00000507536 TMEM136Q6ZRR5 245 aa6.03□□□□□ -1.44
PDGFRA-205ENST00000507536 Q8IZM0 81 aa6.03□□□□□ -1.44
PDGFRA-205ENST00000507536 CTDSP1Q9GZU7 261 aa6.03□□□□□ -1.44
PDGFRA-205ENST00000507536 IGIPA6NJ69 53 aa6.02□□□□□ -1.45
PDGFRA-205ENST00000507536 SCO1O75880 301 aa6.02□□□□□ -1.45
PDGFRA-205ENST00000507536 KRTAP13-2Q52LG2 175 aa6.02□□□□□ -1.45
PDGFRA-205ENST00000507536 C2orf66Q6UXQ4 117 aa6.02□□□□□ -1.45
PDGFRA-205ENST00000507536 Q6ZN92 141 aa6.02□□□□□ -1.45
PDGFRA-205ENST00000507536 ATP5L2Q7Z4Y8 100 aa6.02□□□□□ -1.45
PDGFRA-205ENST00000507536 KRTAP13-1Q8IUC0 172 aa6.02□□□□□ -1.45
PDGFRA-205ENST00000507536 TOMM7Q9P0U1 55 aa6.02□□□□□ -1.45
PDGFRA-205ENST00000507536 TP73-AS1Q9UF72 201 aa6.02□□□□□ -1.45
PDGFRA-205ENST00000507536 A0A0U1RQV1 116 aa6.01□□□□□ -1.45
PDGFRA-205ENST00000507536 LOC389332A0A1B0GUA5 103 aa6.01□□□□□ -1.45
PDGFRA-205ENST00000507536 BCE1O60756 84 aa6.01□□□□□ -1.45
PDGFRA-205ENST00000507536 MRPL55Q7Z7F7 128 aaKnown RBP6.01□□□□□ -1.45
PDGFRA-205ENST00000507536 Q8N8P6 123 aa6.01□□□□□ -1.45
PDGFRA-205ENST00000507536 C2orf88Q9BSF0 95 aa6.01□□□□□ -1.45
PDGFRA-205ENST00000507536 ANAPC11Q9NYG5 84 aa6.01□□□□□ -1.45
PDGFRA-205ENST00000507536 CDKN2A-AS1Q9UH64 79 aa6.01□□□□□ -1.45
PDGFRA-205ENST00000507536 CYSLTR1Q9Y271 337 aa6.01□□□□□ -1.45
PDGFRA-205ENST00000507536 PRSS2P07478 247 aa6□□□□□ -1.45
PDGFRA-205ENST00000507536 CKS1BP61024 79 aa6□□□□□ -1.45
PDGFRA-205ENST00000507536 ALKBH7Q9BT30 221 aaPredicted RBP6□□□□□ -1.45
PDGFRA-205ENST00000507536 MAP1LC3AQ9H492 121 aa6□□□□□ -1.45
PDGFRA-205ENST00000507536 LAMTOR2Q9Y2Q5 125 aa6□□□□□ -1.45
PDGFRA-205ENST00000507536 F8VRH5 84 aa5.99□□□□□ -1.45
PDGFRA-205ENST00000507536 NPSP0C0P6 89 aa5.99□□□□□ -1.45
PDGFRA-205ENST00000507536 RPL28P46779 137 aaKnown RBP5.99□□□□□ -1.45
PDGFRA-205ENST00000507536 PEA15Q15121 130 aa5.99□□□□□ -1.45
PDGFRA-205ENST00000507536 LBHQ53QV2 105 aaPredicted RBP5.99□□□□□ -1.45
PDGFRA-205ENST00000507536 C6orf226Q5I0X4 101 aa5.99□□□□□ -1.45
PDGFRA-205ENST00000507536 TYMSOSQ8TAI1 123 aa5.99□□□□□ -1.45
PDGFRA-205ENST00000507536 LINC00167Q96N53 147 aa5.99□□□□□ -1.45
PDGFRA-205ENST00000507536 RETNLBQ9BQ08 111 aa5.99□□□□□ -1.45
PDGFRA-205ENST00000507536 VCX2Q9H322 139 aa5.99□□□□□ -1.45
PDGFRA-205ENST00000507536 RPL37AP8A6NKH3 93 aa5.98□□□□□ -1.45
PDGFRA-205ENST00000507536 SMIM1B2RUZ4 78 aa5.98□□□□□ -1.45
PDGFRA-205ENST00000507536 SNAPINO95295 136 aa5.98□□□□□ -1.45
PDGFRA-205ENST00000507536 CRYGAP11844 174 aa5.98□□□□□ -1.45
PDGFRA-205ENST00000507536 C12orf57Q99622 126 aa5.98□□□□□ -1.45
PDGFRA-205ENST00000507536 IGLV5-37A0A075B6J1 123 aa5.97□□□□□ -1.45
PDGFRA-205ENST00000507536 HERVK_113P63121 156 aa5.97□□□□□ -1.45
PDGFRA-205ENST00000507536 ORMDL2Q53FV1 153 aa5.97□□□□□ -1.45
PDGFRA-205ENST00000507536 AKR1D1P51857 326 aa5.96□□□□□ -1.46
PDGFRA-205ENST00000507536 IGLV5-45A0A087WSX0 123 aa5.95□□□□□ -1.46
PDGFRA-205ENST00000507536 GAGE10A6NGK3 116 aa5.95□□□□□ -1.46
PDGFRA-205ENST00000507536 K7EMI3 77 aa5.95□□□□□ -1.46
PDGFRA-205ENST00000507536 SMIM6P0DI80 62 aa5.95□□□□□ -1.46
PDGFRA-205ENST00000507536 CXCL5P42830 114 aa5.95□□□□□ -1.46
PDGFRA-205ENST00000507536 TPRXLQ17RH7 258 aa5.95□□□□□ -1.46
PDGFRA-205ENST00000507536 TOMM6Q96B49 74 aa5.95□□□□□ -1.46
PDGFRA-205ENST00000507536 TIMM17AQ99595 171 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms