RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 MUC17Q685J3 4493 aa8.35□□□□□ -1.07
DDR1-260ENST00000507533 IGHV3OR16-9A0A0B4J2B5 98 aa8.35□□□□□ -1.07
DDR1-260ENST00000507533 LOC107984640A0A0U1RRK4 108 aa8.35□□□□□ -1.07
DDR1-260ENST00000507533 H0Y9J4 135 aa8.35□□□□□ -1.07
DDR1-260ENST00000507533 ZNF561-AS1K7EIQ3 104 aa8.35□□□□□ -1.07
DDR1-260ENST00000507533 HBDP02042 147 aa8.35□□□□□ -1.07
DDR1-260ENST00000507533 MALP21145 153 aa8.35□□□□□ -1.07
DDR1-260ENST00000507533 LINC00242Q5T6M2 205 aa8.35□□□□□ -1.07
DDR1-260ENST00000507533 PHF5AQ7RTV0 110 aaKnown RBP8.35□□□□□ -1.07
DDR1-260ENST00000507533 CHCHD1Q96BP2 118 aaKnown RBP8.35□□□□□ -1.07
DDR1-260ENST00000507533 FSIP2Q5CZC0 6907 aa8.35□□□□□ -1.07
DDR1-260ENST00000507533 ATP6V1G1O75348 118 aa8.34□□□□□ -1.07
DDR1-260ENST00000507533 C9orf116Q5BN46 136 aaPredicted RBP8.34□□□□□ -1.07
DDR1-260ENST00000507533 BAGE3Q86Y29 109 aa8.34□□□□□ -1.07
DDR1-260ENST00000507533 CRCT1Q9UGL9 99 aa8.34□□□□□ -1.07
DDR1-260ENST00000507533 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.33□□□□□ -1.08
DDR1-260ENST00000507533 APOMO95445 188 aa8.33□□□□□ -1.08
DDR1-260ENST00000507533 PMCHL1Q16048 86 aa8.33□□□□□ -1.08
DDR1-260ENST00000507533 PDZD11Q5EBL8 140 aa8.33□□□□□ -1.08
DDR1-260ENST00000507533 FAM19A3Q7Z5A8 133 aa8.33□□□□□ -1.08
DDR1-260ENST00000507533 KRTAP1-4P0C5Y4 121 aa8.32□□□□□ -1.08
DDR1-260ENST00000507533 SEC11AP67812 179 aa8.32□□□□□ -1.08
DDR1-260ENST00000507533 A0A087WZ39 114 aa8.31□□□□□ -1.08
DDR1-260ENST00000507533 HSBP1O75506 76 aa8.31□□□□□ -1.08
DDR1-260ENST00000507533 ATP5LO75964 103 aa8.31□□□□□ -1.08
DDR1-260ENST00000507533 RPL13AP40429 203 aaKnown RBP8.31□□□□□ -1.08
DDR1-260ENST00000507533 PMVKQ15126 192 aa8.31□□□□□ -1.08
DDR1-260ENST00000507533 LCE2DQ5TA82 110 aaPredicted RBP8.31□□□□□ -1.08
DDR1-260ENST00000507533 CST9LQ9H4G1 147 aa8.31□□□□□ -1.08
DDR1-260ENST00000507533 TSPAN13O95857 204 aa8.3□□□□□ -1.08
DDR1-260ENST00000507533 HERVK_113P63121 156 aa8.3□□□□□ -1.08
DDR1-260ENST00000507533 LINC01561Q8N1V8 128 aa8.3□□□□□ -1.08
DDR1-260ENST00000507533 IGLV4-69A0A075B6H9 119 aa8.29□□□□□ -1.08
DDR1-260ENST00000507533 SERF1AO75920 110 aa8.29□□□□□ -1.08
DDR1-260ENST00000507533 LINC00310P59036 64 aa8.29□□□□□ -1.08
DDR1-260ENST00000507533 OR10D4PQ8NGN7 298 aa8.29□□□□□ -1.08
DDR1-260ENST00000507533 ORAOV1Q8WV07 137 aa8.29□□□□□ -1.08
DDR1-260ENST00000507533 GEMIN7Q9H840 131 aaKnown RBP8.29□□□□□ -1.08
DDR1-260ENST00000507533 TINCRA0A1B0GVN0 87 aa8.28□□□□□ -1.08
DDR1-260ENST00000507533 NDUFA6P56556 154 aa8.28□□□□□ -1.08
DDR1-260ENST00000507533 RPL18AQ02543 176 aaKnown RBP8.28□□□□□ -1.08
DDR1-260ENST00000507533 SPAG11BQ08648 103 aa8.28□□□□□ -1.08
DDR1-260ENST00000507533 FAM19A2Q8N3H0 131 aa8.28□□□□□ -1.08
DDR1-260ENST00000507533 C2orf48Q96LS8 159 aa8.28□□□□□ -1.08
DDR1-260ENST00000507533 HIST1H2BKO60814 126 aa8.27□□□□□ -1.09
DDR1-260ENST00000507533 HIST1H2BJP06899 126 aa8.27□□□□□ -1.09
DDR1-260ENST00000507533 HIST1H2BOP23527 126 aa8.27□□□□□ -1.09
DDR1-260ENST00000507533 HIST1H2BBP33778 126 aa8.27□□□□□ -1.09
DDR1-260ENST00000507533 HIST1H2BDP58876 126 aa8.27□□□□□ -1.09
DDR1-260ENST00000507533 HIST1H2BCP62807 126 aa8.27□□□□□ -1.09
DDR1-260ENST00000507533 HIST2H2BEQ16778 126 aa8.27□□□□□ -1.09
DDR1-260ENST00000507533 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.27□□□□□ -1.09
DDR1-260ENST00000507533 KRTAP11-1Q8IUC1 163 aa8.27□□□□□ -1.09
DDR1-260ENST00000507533 HIST1H2BHQ93079 126 aa8.27□□□□□ -1.09
DDR1-260ENST00000507533 CAMK2N2Q96S95 79 aa8.27□□□□□ -1.09
DDR1-260ENST00000507533 HIST1H2BNQ99877 126 aa8.27□□□□□ -1.09
DDR1-260ENST00000507533 HIST1H2BMQ99879 126 aa8.27□□□□□ -1.09
DDR1-260ENST00000507533 CDKN2A-AS1Q9UH64 79 aa8.27□□□□□ -1.09
DDR1-260ENST00000507533 F8WDY8 70 aa8.26□□□□□ -1.09
DDR1-260ENST00000507533 NUPR1O60356 82 aa8.26□□□□□ -1.09
DDR1-260ENST00000507533 IFI27L1Q96BM0 104 aa8.26□□□□□ -1.09
DDR1-260ENST00000507533 IGLV5-45A0A087WSX0 123 aa8.25□□□□□ -1.09
DDR1-260ENST00000507533 IGLC3P0DOY3 106 aa8.25□□□□□ -1.09
DDR1-260ENST00000507533 KIAA0087Q14695 138 aa8.25□□□□□ -1.09
DDR1-260ENST00000507533 LINC00469Q8N7U9 141 aa8.25□□□□□ -1.09
DDR1-260ENST00000507533 PACRGQ96M98 296 aaPredicted RBP8.24□□□□□ -1.09
DDR1-260ENST00000507533 TRAV12-1A0A0B4J245 112 aa8.23□□□□□ -1.09
DDR1-260ENST00000507533 NDUFA1O15239 70 aa8.23□□□□□ -1.09
DDR1-260ENST00000507533 LEPROTL1O95214 131 aa8.23□□□□□ -1.09
DDR1-260ENST00000507533 PRSS2P07478 247 aa8.22□□□□□ -1.09
DDR1-260ENST00000507533 RNF151Q2KHN1 245 aa8.22□□□□□ -1.09
DDR1-260ENST00000507533 MRPL35Q9NZE8 188 aaKnown RBP8.22□□□□□ -1.09
DDR1-260ENST00000507533 TOMM7Q9P0U1 55 aa8.22□□□□□ -1.09
DDR1-260ENST00000507533 CHTOPQ9Y3Y2 248 aaKnown RBP8.22□□□□□ -1.09
DDR1-260ENST00000507533 FAM168BA1KXE4 195 aa8.21□□□□□ -1.1
DDR1-260ENST00000507533 SMIM1B2RUZ4 78 aa8.21□□□□□ -1.1
DDR1-260ENST00000507533 H3BRM9 83 aa8.21□□□□□ -1.1
DDR1-260ENST00000507533 UNQ6190/PRO20217Q6UXQ8 127 aa8.21□□□□□ -1.1
DDR1-260ENST00000507533 Q8IZM0 81 aa8.21□□□□□ -1.1
DDR1-260ENST00000507533 HSPB8Q9UJY1 196 aa8.21□□□□□ -1.1
DDR1-260ENST00000507533 C11orf86A6NJI1 115 aa8.2□□□□□ -1.1
DDR1-260ENST00000507533 SPINK8P0C7L1 97 aa8.2□□□□□ -1.1
DDR1-260ENST00000507533 FABP4P15090 132 aa8.2□□□□□ -1.1
DDR1-260ENST00000507533 ZNF22P17026 224 aaPredicted RBP8.2□□□□□ -1.1
DDR1-260ENST00000507533 C6orf226Q5I0X4 101 aa8.2□□□□□ -1.1
DDR1-260ENST00000507533 COA6Q5JTJ3 125 aaKnown RBP8.2□□□□□ -1.1
DDR1-260ENST00000507533 C10orf25Q5T742 122 aa8.2□□□□□ -1.1
DDR1-260ENST00000507533 F8VRH5 84 aa8.19□□□□□ -1.1
DDR1-260ENST00000507533 C2orf82Q6UX34 121 aa8.19□□□□□ -1.1
DDR1-260ENST00000507533 FAM19A5Q7Z5A7 132 aaPredicted RBP8.19□□□□□ -1.1
DDR1-260ENST00000507533 CDIP1Q9H305 208 aa8.19□□□□□ -1.1
DDR1-260ENST00000507533 C6orf48Q9UBA6 75 aa8.19□□□□□ -1.1
DDR1-260ENST00000507533 TRBV30A0A0K0K1B3 111 aa8.18□□□□□ -1.1
DDR1-260ENST00000507533 CKS1BP61024 79 aa8.18□□□□□ -1.1
DDR1-260ENST00000507533 COX7B2Q8TF08 81 aa8.18□□□□□ -1.1
DDR1-260ENST00000507533 H0Y8G0 127 aa8.17□□□□□ -1.1
DDR1-260ENST00000507533 CXCL5P42830 114 aa8.17□□□□□ -1.1
DDR1-260ENST00000507533 UBE2BP63146 152 aa8.17□□□□□ -1.1
DDR1-260ENST00000507533 TMEM170BQ5T4T1 132 aa8.17□□□□□ -1.1
DDR1-260ENST00000507533 IGLV5-39A0A0G2JS06 123 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms