RNA–Protein interactions for RNA: ENST00000506927.1

CLDND1-213, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-213ENST00000506927 CSNK1G2-AS1Q8NCQ2 148 aa4.07□□□□□ -1.76
CLDND1-213ENST00000506927 SMCR5Q8TEV8 140 aa4.07□□□□□ -1.76
CLDND1-213ENST00000506927 TLN1Q9Y490 2541 aaKnown RBP4.07□□□□□ -1.76
CLDND1-213ENST00000506927 SPTBN1Q01082 2364 aaKnown RBP4.07□□□□□ -1.76
CLDND1-213ENST00000506927 DMXL2Q8TDJ6 3036 aa4.07□□□□□ -1.76
CLDND1-213ENST00000506927 CFAP47Q6ZTR5 3102 aa4.06□□□□□ -1.76
CLDND1-213ENST00000506927 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.06□□□□□ -1.768e-16■■■■■ 31.6
CLDND1-213ENST00000506927 BOD1L1Q8NFC6 3051 aa4.06□□□□□ -1.76
CLDND1-213ENST00000506927 IGLV4-60A0A075B6I1 120 aa4.06□□□□□ -1.76
CLDND1-213ENST00000506927 LOC107984640A0A0U1RRK4 108 aa4.06□□□□□ -1.76
CLDND1-213ENST00000506927 A0A1B0GW54 56 aa4.06□□□□□ -1.76
CLDND1-213ENST00000506927 PLAC8L1A1L4L8 177 aa4.06□□□□□ -1.76
CLDND1-213ENST00000506927 PRM2P04554 102 aa4.06□□□□□ -1.76
CLDND1-213ENST00000506927 XCL1P47992 114 aa4.06□□□□□ -1.76
CLDND1-213ENST00000506927 ATP5EP56381 51 aaPredicted RBP4.06□□□□□ -1.76
CLDND1-213ENST00000506927 CXCL6P80162 114 aa4.06□□□□□ -1.76
CLDND1-213ENST00000506927 LINC00846Q9NV44 126 aa4.06□□□□□ -1.76
CLDND1-213ENST00000506927 SPTA1P02549 2419 aa4.06□□□□□ -1.76
CLDND1-213ENST00000506927 MED13LQ71F56 2210 aa4.06□□□□□ -1.76
CLDND1-213ENST00000506927 ZFHX4Q86UP3 3567 aa4.06□□□□□ -1.76
CLDND1-213ENST00000506927 BSNQ9UPA5 3926 aa4.05□□□□□ -1.76
CLDND1-213ENST00000506927 GVQW2A0A096LPI5 108 aaPredicted RBP4.05□□□□□ -1.76
CLDND1-213ENST00000506927 C9orf66Q5T8R8 295 aa4.05□□□□□ -1.76
CLDND1-213ENST00000506927 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.05□□□□□ -1.76
CLDND1-213ENST00000506927 C2orf48Q96LS8 159 aa4.05□□□□□ -1.76
CLDND1-213ENST00000506927 LAMTOR3Q9UHA4 124 aa4.05□□□□□ -1.76
CLDND1-213ENST00000506927 GVINP1Q7Z2Y8 2422 aa4.05□□□□□ -1.76
CLDND1-213ENST00000506927 ABCA2Q9BZC7 2435 aa4.05□□□□□ -1.76
CLDND1-213ENST00000506927 AKAP13Q12802 2813 aa4.05□□□□□ -1.76
CLDND1-213ENST00000506927 HIVEP3Q5T1R4 2406 aa4.04□□□□□ -1.76
CLDND1-213ENST00000506927 TRAV7A0A075B6U4 112 aa4.04□□□□□ -1.76
CLDND1-213ENST00000506927 IGKV3D-7A0A0C4DH55 119 aa4.04□□□□□ -1.76
CLDND1-213ENST00000506927 A0A0J9YWU9 116 aa4.04□□□□□ -1.76
CLDND1-213ENST00000506927 NCR3O14931 201 aa4.04□□□□□ -1.76
CLDND1-213ENST00000506927 GIG44P09565 113 aaPredicted RBP4.04□□□□□ -1.76
CLDND1-213ENST00000506927 IGHV4-30-4P0DP06 118 aa4.04□□□□□ -1.76
CLDND1-213ENST00000506927 DEFB130BP0DP73 79 aa4.04□□□□□ -1.76
CLDND1-213ENST00000506927 DEFB130AP0DP74 79 aa4.04□□□□□ -1.76
CLDND1-213ENST00000506927 MIFP14174 115 aa4.04□□□□□ -1.76
CLDND1-213ENST00000506927 LINC00575Q6W349 94 aa4.04□□□□□ -1.76
CLDND1-213ENST00000506927 C6orf223Q8N319 242 aa4.04□□□□□ -1.76
CLDND1-213ENST00000506927 MAPK1IP1LQ8NDC0 245 aa4.04□□□□□ -1.76
CLDND1-213ENST00000506927 LINC01006Q8NI28 216 aa4.04□□□□□ -1.76
CLDND1-213ENST00000506927 C22orf24Q9Y442 160 aa4.04□□□□□ -1.76
CLDND1-213ENST00000506927 SPENQ96T58 3664 aaKnown RBP4.04□□□□□ -1.76
CLDND1-213ENST00000506927 MUC3AQ02505 3323 aa4.04□□□□□ -1.76
CLDND1-213ENST00000506927 LRBAP50851 2863 aa4.04□□□□□ -1.76
CLDND1-213ENST00000506927 ANGP03950 147 aaKnown RBP4.03□□□□□ -1.76
CLDND1-213ENST00000506927 SPART-AS1P0CW21 52 aa4.03□□□□□ -1.76
CLDND1-213ENST00000506927 DAD1P61803 113 aa4.03□□□□□ -1.76
CLDND1-213ENST00000506927 REG3AQ06141 175 aa4.03□□□□□ -1.76
CLDND1-213ENST00000506927 LELP1Q5T871 98 aa4.03□□□□□ -1.76
CLDND1-213ENST00000506927 CHCHD10Q8WYQ3 142 aaPredicted RBP4.03□□□□□ -1.76
CLDND1-213ENST00000506927 DIRC1Q969H9 104 aa4.03□□□□□ -1.76
CLDND1-213ENST00000506927 UPK3BQ9BT76 320 aa4.03□□□□□ -1.76
CLDND1-213ENST00000506927 TTC28Q96AY4 2481 aa4.03□□□□□ -1.76
CLDND1-213ENST00000506927 TACC2O95359 2948 aa4.03□□□□□ -1.76
CLDND1-213ENST00000506927 ATMQ13315 3056 aa4.02□□□□□ -1.77
CLDND1-213ENST00000506927 DMXL1Q9Y485 3027 aa4.02□□□□□ -1.77
CLDND1-213ENST00000506927 LOC100131303A0A0U1RQF7 123 aa4.02□□□□□ -1.77
CLDND1-213ENST00000506927 HILS1P60008 231 aa4.02□□□□□ -1.77
CLDND1-213ENST00000506927 C6orf99Q4VX62 202 aa4.02□□□□□ -1.77
CLDND1-213ENST00000506927 LINC00269Q8N2A0 174 aa4.02□□□□□ -1.77
CLDND1-213ENST00000506927 H3BNG1 76 aa4.01□□□□□ -1.77
CLDND1-213ENST00000506927 ERC2-IT1O76042 136 aa4.01□□□□□ -1.77
CLDND1-213ENST00000506927 IGLV6-57P01721 117 aa4.01□□□□□ -1.77
CLDND1-213ENST00000506927 KRTAP10-11P60412 298 aa4.01□□□□□ -1.77
CLDND1-213ENST00000506927 SPAG11BQ08648 103 aa4.01□□□□□ -1.77
CLDND1-213ENST00000506927 KIAA0087Q14695 138 aa4.01□□□□□ -1.77
CLDND1-213ENST00000506927 Q6ZQT0 140 aa4.01□□□□□ -1.77
CLDND1-213ENST00000506927 DPH3Q96FX2 82 aa4.01□□□□□ -1.77
CLDND1-213ENST00000506927 C11orf68Q9H3H3 251 aaKnown RBP4.01□□□□□ -1.77
CLDND1-213ENST00000506927 HRNRQ86YZ3 2850 aaPredicted RBP4.01□□□□□ -1.77
CLDND1-213ENST00000506927 MUC6Q6W4X9 2439 aa4□□□□□ -1.77
CLDND1-213ENST00000506927 TRAV23DV6A0A075B6W5 121 aa4□□□□□ -1.77
CLDND1-213ENST00000506927 COX7BP24311 80 aa4□□□□□ -1.77
CLDND1-213ENST00000506927 ENHOQ6UWT2 76 aa4□□□□□ -1.77
CLDND1-213ENST00000506927 FAM19A5Q7Z5A7 132 aaPredicted RBP4□□□□□ -1.77
CLDND1-213ENST00000506927 SERP1Q9Y6X1 66 aa4□□□□□ -1.77
CLDND1-213ENST00000506927 DCHS1Q96JQ0 3298 aa4□□□□□ -1.77
CLDND1-213ENST00000506927 CR1P17927 2039 aa4□□□□□ -1.77
CLDND1-213ENST00000506927 SMG1Q96Q15 3661 aaKnown RBP4□□□□□ -1.77
CLDND1-213ENST00000506927 FAM236DA0A1B0GTK5 79 aa3.99□□□□□ -1.77
CLDND1-213ENST00000506927 M0R378 163 aa3.99□□□□□ -1.77
CLDND1-213ENST00000506927 FAM236CP0DP71 79 aa3.99□□□□□ -1.77
CLDND1-213ENST00000506927 HAMPP81172 84 aa3.99□□□□□ -1.77
CLDND1-213ENST00000506927 EGFEM1PQ0D2K5 195 aa3.99□□□□□ -1.77
CLDND1-213ENST00000506927 ZNF843Q8N446 348 aa3.99□□□□□ -1.77
CLDND1-213ENST00000506927 AKAP6Q13023 2319 aa3.99□□□□□ -1.77
CLDND1-213ENST00000506927 SPTAN1Q13813 2472 aaKnown RBP3.98□□□□□ -1.77
CLDND1-213ENST00000506927 CYSRT1A8MQ03 144 aa3.98□□□□□ -1.77
CLDND1-213ENST00000506927 PLA2G2AP14555 144 aa3.98□□□□□ -1.77
CLDND1-213ENST00000506927 LINC01547P58512 204 aaPredicted RBP3.98□□□□□ -1.77
CLDND1-213ENST00000506927 NANOS2P60321 138 aaKnown RBP3.98□□□□□ -1.77
CLDND1-213ENST00000506927 KLKP1Q107X0 134 aa3.98□□□□□ -1.77
CLDND1-213ENST00000506927 C10orf25Q5T742 122 aa3.98□□□□□ -1.77
CLDND1-213ENST00000506927 Q8N9P0 234 aaPredicted RBP3.98□□□□□ -1.77
CLDND1-213ENST00000506927 MRAPQ8TCY5 172 aa3.98□□□□□ -1.77
CLDND1-213ENST00000506927 ESM1Q9NQ30 184 aa3.98□□□□□ -1.77
CLDND1-213ENST00000506927 PRR34Q9NV39 138 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms