RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 ANK3Q12955 4377 aaKnown RBP5.3□□□□□ -1.56
PPARGC1A-204ENST00000506055 A0A087WYN8 130 aa5.29□□□□□ -1.56
PPARGC1A-204ENST00000506055 B5MCH6 92 aa5.29□□□□□ -1.56
PPARGC1A-204ENST00000506055 ATP5G1P05496 136 aa5.29□□□□□ -1.56
PPARGC1A-204ENST00000506055 SS18Q15532 418 aa5.29□□□□□ -1.56
PPARGC1A-204ENST00000506055 Q6Q795 121 aa5.29□□□□□ -1.56
PPARGC1A-204ENST00000506055 C22orf24Q9Y442 160 aa5.29□□□□□ -1.56
PPARGC1A-204ENST00000506055 DNAL4O96015 105 aa5.29□□□□□ -1.56
PPARGC1A-204ENST00000506055 MALP21145 153 aa5.29□□□□□ -1.56
PPARGC1A-204ENST00000506055 MRPL23Q16540 153 aaKnown RBP5.29□□□□□ -1.56
PPARGC1A-204ENST00000506055 PPDPFQ9H3Y8 114 aa5.29□□□□□ -1.56
PPARGC1A-204ENST00000506055 X6R8D5 127 aa5.29□□□□□ -1.56
PPARGC1A-204ENST00000506055 ACYP1P07311 99 aa5.28□□□□□ -1.56
PPARGC1A-204ENST00000506055 FAM222AQ5U5X8 452 aa5.28□□□□□ -1.56
PPARGC1A-204ENST00000506055 PRO0255Q9UI72 69 aa5.28□□□□□ -1.56
PPARGC1A-204ENST00000506055 UNC79Q9P2D8 2635 aa5.28□□□□□ -1.56
PPARGC1A-204ENST00000506055 GAGE2AQ6NT46 116 aa5.28□□□□□ -1.56
PPARGC1A-204ENST00000506055 LINC00269Q8N2A0 174 aa5.28□□□□□ -1.56
PPARGC1A-204ENST00000506055 SPATA3Q8NHX4 192 aa5.28□□□□□ -1.56
PPARGC1A-204ENST00000506055 SMCR5Q8TEV8 140 aa5.28□□□□□ -1.56
PPARGC1A-204ENST00000506055 HIVEP2P31629 2446 aa5.28□□□□□ -1.56
PPARGC1A-204ENST00000506055 IGLV10-54A0A075B6I4 117 aa5.27□□□□□ -1.57
PPARGC1A-204ENST00000506055 A0A1B0GUV1 79 aa5.27□□□□□ -1.57
PPARGC1A-204ENST00000506055 CCDC179H3BU77 68 aa5.27□□□□□ -1.57
PPARGC1A-204ENST00000506055 PRR3P79522 188 aaKnown RBP5.27□□□□□ -1.57
PPARGC1A-204ENST00000506055 DEFB135Q30KP9 77 aa5.27□□□□□ -1.57
PPARGC1A-204ENST00000506055 Q8N3U1 123 aa5.27□□□□□ -1.57
PPARGC1A-204ENST00000506055 LINC00612Q8N6U2 182 aa5.27□□□□□ -1.57
PPARGC1A-204ENST00000506055 LECT2O14960 151 aa5.27□□□□□ -1.57
PPARGC1A-204ENST00000506055 C9orf129Q5T035 196 aaKnown RBP5.27□□□□□ -1.57
PPARGC1A-204ENST00000506055 SS18L2Q9UHA2 77 aa5.27□□□□□ -1.57
PPARGC1A-204ENST00000506055 HECTD1Q9ULT8 2610 aa5.26□□□□□ -1.57
PPARGC1A-204ENST00000506055 H0YGX0 51 aa5.26□□□□□ -1.57
PPARGC1A-204ENST00000506055 SLPIP03973 132 aa5.26□□□□□ -1.57
PPARGC1A-204ENST00000506055 TENM1Q9UKZ4 2725 aa5.26□□□□□ -1.57
PPARGC1A-204ENST00000506055 TRBV7-7A0A0K0K1E9 115 aa5.26□□□□□ -1.57
PPARGC1A-204ENST00000506055 SMIM9A6NGZ8 99 aa5.26□□□□□ -1.57
PPARGC1A-204ENST00000506055 J3QKU1 62 aa5.26□□□□□ -1.57
PPARGC1A-204ENST00000506055 ANGP03950 147 aaKnown RBP5.26□□□□□ -1.57
PPARGC1A-204ENST00000506055 INAFM2P0DMQ5 153 aa5.26□□□□□ -1.57
PPARGC1A-204ENST00000506055 Q8IZM0 81 aa5.25□□□□□ -1.57
PPARGC1A-204ENST00000506055 C14orf132Q9NPU4 83 aa5.25□□□□□ -1.57
PPARGC1A-204ENST00000506055 FLNBO75369 2602 aaKnown RBP5.25□□□□□ -1.57
PPARGC1A-204ENST00000506055 LY6G6DO95868 133 aa5.25□□□□□ -1.57
PPARGC1A-204ENST00000506055 C9orf116Q5BN46 136 aaPredicted RBP5.25□□□□□ -1.57
PPARGC1A-204ENST00000506055 LINC00643Q86TS7 51 aa5.25□□□□□ -1.57
PPARGC1A-204ENST00000506055 FAM236AA0A1B0GUQ0 79 aa5.24□□□□□ -1.57
PPARGC1A-204ENST00000506055 FAM236BA0A1B0GV22 79 aa5.24□□□□□ -1.57
PPARGC1A-204ENST00000506055 CFAP161Q6P656 301 aa5.24□□□□□ -1.57
PPARGC1A-204ENST00000506055 CHCHD10Q8WYQ3 142 aaPredicted RBP5.24□□□□□ -1.57
PPARGC1A-204ENST00000506055 LYRM9A8MSI8 78 aa5.24□□□□□ -1.57
PPARGC1A-204ENST00000506055 NCR3O14931 201 aa5.24□□□□□ -1.57
PPARGC1A-204ENST00000506055 HTN3P15516 51 aa5.24□□□□□ -1.57
PPARGC1A-204ENST00000506055 DAD1P61803 113 aa5.24□□□□□ -1.57
PPARGC1A-204ENST00000506055 REG3AQ06141 175 aa5.24□□□□□ -1.57
PPARGC1A-204ENST00000506055 CD164L2Q6UWJ8 174 aa5.24□□□□□ -1.57
PPARGC1A-204ENST00000506055 IGHV4-28A0A0C4DH34 117 aa5.23□□□□□ -1.57
PPARGC1A-204ENST00000506055 C9orf66Q5T8R8 295 aa5.23□□□□□ -1.57
PPARGC1A-204ENST00000506055 OTOGQ6ZRI0 2925 aa5.23□□□□□ -1.57
PPARGC1A-204ENST00000506055 BAHCC1Q9P281 2608 aa5.23□□□□□ -1.57
PPARGC1A-204ENST00000506055 KIAA0087Q14695 138 aa5.23□□□□□ -1.57
PPARGC1A-204ENST00000506055 IMUPQ9GZP8 106 aa5.23□□□□□ -1.57
PPARGC1A-204ENST00000506055 CELA1Q9UNI1 258 aa5.22□□□□□ -1.57
PPARGC1A-204ENST00000506055 NOTCH2Q04721 2471 aa5.22□□□□□ -1.57
PPARGC1A-204ENST00000506055 INAFM1C9JVW0 142 aa5.22□□□□□ -1.57
PPARGC1A-204ENST00000506055 SDIM1Q6ZPB5 146 aa5.22□□□□□ -1.57
PPARGC1A-204ENST00000506055 LINC00526Q96FQ7 95 aa5.22□□□□□ -1.57
PPARGC1A-204ENST00000506055 APOC4P55056 127 aa5.21□□□□□ -1.58
PPARGC1A-204ENST00000506055 ORMDL1Q9P0S3 153 aa5.21□□□□□ -1.58
PPARGC1A-204ENST00000506055 TRRAPQ9Y4A5 3859 aa5.21□□□□□ -1.58
PPARGC1A-204ENST00000506055 NANOS2P60321 138 aaKnown RBP5.21□□□□□ -1.58
PPARGC1A-204ENST00000506055 C6orf223Q8N319 242 aa5.21□□□□□ -1.58
PPARGC1A-204ENST00000506055 C3orf56Q8N813 242 aa5.21□□□□□ -1.58
PPARGC1A-204ENST00000506055 COX17Q14061 63 aa5.2□□□□□ -1.58
PPARGC1A-204ENST00000506055 LINC01561Q8N1V8 128 aa5.2□□□□□ -1.58
PPARGC1A-204ENST00000506055 KLK5Q9Y337 293 aaPredicted RBP5.2□□□□□ -1.58
PPARGC1A-204ENST00000506055 Q8N814 137 aa5.2□□□□□ -1.58
PPARGC1A-204ENST00000506055 OBSCN-AS1Q96MR7 158 aa5.2□□□□□ -1.58
PPARGC1A-204ENST00000506055 TMEM126AQ9H061 195 aa5.2□□□□□ -1.58
PPARGC1A-204ENST00000506055 LINC00846Q9NV44 126 aa5.2□□□□□ -1.58
PPARGC1A-204ENST00000506055 CXCL5P42830 114 aa5.19□□□□□ -1.58
PPARGC1A-204ENST00000506055 C10orf25Q5T742 122 aa5.19□□□□□ -1.58
PPARGC1A-204ENST00000506055 UNQ6190/PRO20217Q6UXQ8 127 aa5.19□□□□□ -1.58
PPARGC1A-204ENST00000506055 Q8NAQ8 132 aa5.19□□□□□ -1.58
PPARGC1A-204ENST00000506055 Q8NDZ9 215 aa5.19□□□□□ -1.58
PPARGC1A-204ENST00000506055 IGKV3D-7A0A0C4DH55 119 aa5.19□□□□□ -1.58
PPARGC1A-204ENST00000506055 S100A7L2Q5SY68 101 aa5.19□□□□□ -1.58
PPARGC1A-204ENST00000506055 KLK12Q9UKR0 248 aa5.19□□□□□ -1.58
PPARGC1A-204ENST00000506055 NDUFC2O95298 119 aa5.18□□□□□ -1.58
PPARGC1A-204ENST00000506055 SPART-AS1P0CW21 52 aa5.18□□□□□ -1.58
PPARGC1A-204ENST00000506055 C6orf99Q4VX62 202 aa5.18□□□□□ -1.58
PPARGC1A-204ENST00000506055 ATRQ13535 2644 aa5.18□□□□□ -1.58
PPARGC1A-204ENST00000506055 MIFP14174 115 aa5.18□□□□□ -1.58
PPARGC1A-204ENST00000506055 CYSRT1A8MQ03 144 aa5.17□□□□□ -1.58
PPARGC1A-204ENST00000506055 SPAG11BQ08648 103 aa5.17□□□□□ -1.58
PPARGC1A-204ENST00000506055 TMEM256-PLSCR3K7ERE1 68 aa5.17□□□□□ -1.58
PPARGC1A-204ENST00000506055 IGHV4-30-4P0DP06 118 aa5.17□□□□□ -1.58
PPARGC1A-204ENST00000506055 NSD1Q96L73 2696 aaPredicted RBP5.16□□□□□ -1.58
PPARGC1A-204ENST00000506055 HIVEP1P15822 2718 aa5.16□□□□□ -1.58
PPARGC1A-204ENST00000506055 LELP1Q5T871 98 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms