RNA–Protein interactions for RNA: ENST00000504315.1

HOXC6-203, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-203ENST00000504315 IGLV5-45A0A087WSX0 123 aa8.4□□□□□ -1.06
HOXC6-203ENST00000504315 GAGE2EQ4V326 116 aa8.4□□□□□ -1.06
HOXC6-203ENST00000504315 REG3GQ6UW15 175 aa8.4□□□□□ -1.06
HOXC6-203ENST00000504315 KRTAP7-1Q8IUC3 87 aa8.4□□□□□ -1.06
HOXC6-203ENST00000504315 GEMIN7Q9H840 131 aaKnown RBP8.4□□□□□ -1.06
HOXC6-203ENST00000504315 GAGE2DQ9UEU5 116 aa8.4□□□□□ -1.06
HOXC6-203ENST00000504315 TINCRA0A1B0GVN0 87 aa8.39□□□□□ -1.07
HOXC6-203ENST00000504315 PRSS2P07478 247 aa8.39□□□□□ -1.07
HOXC6-203ENST00000504315 FABP9Q0Z7S8 132 aa8.39□□□□□ -1.07
HOXC6-203ENST00000504315 PLA2G2DQ9UNK4 145 aa8.39□□□□□ -1.07
HOXC6-203ENST00000504315 C9orf129Q5T035 196 aaKnown RBP8.38□□□□□ -1.07
HOXC6-203ENST00000504315 TOMM7Q9P0U1 55 aa8.38□□□□□ -1.07
HOXC6-203ENST00000504315 SMIM1B2RUZ4 78 aa8.37□□□□□ -1.07
HOXC6-203ENST00000504315 CXCL5P42830 114 aa8.37□□□□□ -1.07
HOXC6-203ENST00000504315 KRTAP10-8P60410 259 aa8.37□□□□□ -1.07
HOXC6-203ENST00000504315 CKS1BP61024 79 aa8.37□□□□□ -1.07
HOXC6-203ENST00000504315 ODF1Q14990 250 aa8.37□□□□□ -1.07
HOXC6-203ENST00000504315 C6orf226Q5I0X4 101 aa8.37□□□□□ -1.07
HOXC6-203ENST00000504315 C1orf137Q5JT78 98 aa8.37□□□□□ -1.07
HOXC6-203ENST00000504315 FA2HQ7L5A8 372 aa8.37□□□□□ -1.07
HOXC6-203ENST00000504315 FAM19A5Q7Z5A7 132 aaPredicted RBP8.37□□□□□ -1.07
HOXC6-203ENST00000504315 KRTAP11-1Q8IUC1 163 aa8.37□□□□□ -1.07
HOXC6-203ENST00000504315 CST9LQ9H4G1 147 aa8.37□□□□□ -1.07
HOXC6-203ENST00000504315 SMCO4Q9NRQ5 59 aa8.37□□□□□ -1.07
HOXC6-203ENST00000504315 A0A096LNJ9 63 aa8.36□□□□□ -1.07
HOXC6-203ENST00000504315 F8VRH5 84 aa8.36□□□□□ -1.07
HOXC6-203ENST00000504315 PMVKQ15126 192 aa8.36□□□□□ -1.07
HOXC6-203ENST00000504315 PDZD11Q5EBL8 140 aa8.36□□□□□ -1.07
HOXC6-203ENST00000504315 LINC00469Q8N7U9 141 aa8.36□□□□□ -1.07
HOXC6-203ENST00000504315 C18orf32Q8TCD1 76 aa8.36□□□□□ -1.07
HOXC6-203ENST00000504315 M0QXV9 152 aa8.35□□□□□ -1.07
HOXC6-203ENST00000504315 IGLV7-43P04211 117 aa8.35□□□□□ -1.07
HOXC6-203ENST00000504315 SVBPQ8N300 66 aa8.35□□□□□ -1.07
HOXC6-203ENST00000504315 URB1-AS1Q96HZ7 61 aa8.35□□□□□ -1.07
HOXC6-203ENST00000504315 TRAPPC1Q9Y5R8 145 aa8.35□□□□□ -1.07
HOXC6-203ENST00000504315 SNAPINO95295 136 aa8.34□□□□□ -1.07
HOXC6-203ENST00000504315 APOC3P02656 99 aa8.34□□□□□ -1.07
HOXC6-203ENST00000504315 LINC00614P0C842 121 aa8.33□□□□□ -1.08
HOXC6-203ENST00000504315 NDUFA5Q16718 116 aa8.33□□□□□ -1.08
HOXC6-203ENST00000504315 IGLC3P0DOY3 106 aa8.32□□□□□ -1.08
HOXC6-203ENST00000504315 COX7B2Q8TF08 81 aa8.32□□□□□ -1.08
HOXC6-203ENST00000504315 YPEL4Q96NS1 127 aa8.32□□□□□ -1.08
HOXC6-203ENST00000504315 DIRC1Q969H9 104 aa8.31□□□□□ -1.08
HOXC6-203ENST00000504315 HBDP02042 147 aa8.3□□□□□ -1.08
HOXC6-203ENST00000504315 SPINK8P0C7L1 97 aa8.3□□□□□ -1.08
HOXC6-203ENST00000504315 XAGE1AQ9HD64 81 aa8.3□□□□□ -1.08
HOXC6-203ENST00000504315 TP73-AS1Q9UF72 201 aa8.3□□□□□ -1.08
HOXC6-203ENST00000504315 IGLV5-39A0A0G2JS06 123 aa8.29□□□□□ -1.08
HOXC6-203ENST00000504315 H0Y9J4 135 aa8.29□□□□□ -1.08
HOXC6-203ENST00000504315 H3BRM9 83 aa8.29□□□□□ -1.08
HOXC6-203ENST00000504315 UBE2BP63146 152 aa8.29□□□□□ -1.08
HOXC6-203ENST00000504315 C22orf24Q9Y442 160 aa8.29□□□□□ -1.08
HOXC6-203ENST00000504315 ZNF22P17026 224 aaPredicted RBP8.28□□□□□ -1.08
HOXC6-203ENST00000504315 RAB5BP61020 215 aa8.28□□□□□ -1.08
HOXC6-203ENST00000504315 UBR4Q5T4S7 5183 aa8.27□□□□□ -1.09
HOXC6-203ENST00000504315 ATP5LO75964 103 aa8.27□□□□□ -1.09
HOXC6-203ENST00000504315 PMCHL1Q16048 86 aa8.27□□□□□ -1.09
HOXC6-203ENST00000504315 NUPR1O60356 82 aa8.26□□□□□ -1.09
HOXC6-203ENST00000504315 KRTAP1-4P0C5Y4 121 aa8.26□□□□□ -1.09
HOXC6-203ENST00000504315 MRPL55Q7Z7F7 128 aaKnown RBP8.26□□□□□ -1.09
HOXC6-203ENST00000504315 IGLV5-37A0A075B6J1 123 aa8.25□□□□□ -1.09
HOXC6-203ENST00000504315 NDUFA6P56556 154 aa8.25□□□□□ -1.09
HOXC6-203ENST00000504315 LBHQ53QV2 105 aaPredicted RBP8.25□□□□□ -1.09
HOXC6-203ENST00000504315 CHCHD1Q96BP2 118 aaKnown RBP8.24□□□□□ -1.09
HOXC6-203ENST00000504315 C11orf86A6NJI1 115 aa8.23□□□□□ -1.09
HOXC6-203ENST00000504315 ZNF861PO60384 105 aa8.23□□□□□ -1.09
HOXC6-203ENST00000504315 IGLV1-50A0A075B6I6 118 aa8.22□□□□□ -1.09
HOXC6-203ENST00000504315 BAGE3Q86Y29 109 aa8.22□□□□□ -1.09
HOXC6-203ENST00000504315 PRR26Q8N8Z3 221 aa8.22□□□□□ -1.09
HOXC6-203ENST00000504315 COX17Q14061 63 aa8.21□□□□□ -1.1
HOXC6-203ENST00000504315 SFTA2Q6UW10 78 aa8.21□□□□□ -1.1
HOXC6-203ENST00000504315 CBLN2Q8IUK8 224 aa8.21□□□□□ -1.1
HOXC6-203ENST00000504315 LINC00167Q96N53 147 aa8.21□□□□□ -1.1
HOXC6-203ENST00000504315 TRAV12-1A0A0B4J245 112 aa8.2□□□□□ -1.1
HOXC6-203ENST00000504315 TMEM170BQ5T4T1 132 aa8.2□□□□□ -1.1
HOXC6-203ENST00000504315 IFI27L1Q96BM0 104 aa8.2□□□□□ -1.1
HOXC6-203ENST00000504315 ERG28Q9UKR5 140 aa8.2□□□□□ -1.1
HOXC6-203ENST00000504315 LRP2P98164 4655 aa8.19□□□□□ -1.1
HOXC6-203ENST00000504315 BCE1O60756 84 aa8.19□□□□□ -1.1
HOXC6-203ENST00000504315 ZNF625Q96I27 306 aaPredicted RBP8.19□□□□□ -1.1
HOXC6-203ENST00000504315 CHTOPQ9Y3Y2 248 aaKnown RBP8.19□□□□□ -1.1
HOXC6-203ENST00000504315 TMEM223A0PJW6 202 aa8.17□□□□□ -1.1
HOXC6-203ENST00000504315 VPREB1P12018 145 aa8.17□□□□□ -1.1
HOXC6-203ENST00000504315 PFN2P35080 140 aa8.17□□□□□ -1.1
HOXC6-203ENST00000504315 RPL13AP40429 203 aaKnown RBP8.17□□□□□ -1.1
HOXC6-203ENST00000504315 NKAPP1Q8N9T2 125 aa8.17□□□□□ -1.1
HOXC6-203ENST00000504315 SND1-IT1Q9HBX3 110 aa8.17□□□□□ -1.1
HOXC6-203ENST00000504315 RPL37AP8A6NKH3 93 aa8.16□□□□□ -1.1
HOXC6-203ENST00000504315 RPL28P46779 137 aaKnown RBP8.16□□□□□ -1.1
HOXC6-203ENST00000504315 KRTAP13-1Q8IUC0 172 aa8.16□□□□□ -1.1
HOXC6-203ENST00000504315 GAGE10A6NGK3 116 aa8.15□□□□□ -1.1
HOXC6-203ENST00000504315 HSBP1O75506 76 aa8.15□□□□□ -1.1
HOXC6-203ENST00000504315 TRGC2P03986 189 aa8.15□□□□□ -1.1
HOXC6-203ENST00000504315 LINC00310P59036 64 aa8.15□□□□□ -1.1
HOXC6-203ENST00000504315 FAM19A2Q8N3H0 131 aa8.14□□□□□ -1.11
HOXC6-203ENST00000504315 SCO1O75880 301 aa8.13□□□□□ -1.11
HOXC6-203ENST00000504315 Q8NDZ9 215 aa8.13□□□□□ -1.11
HOXC6-203ENST00000504315 RPL24P83731 157 aaKnown RBP8.12□□□□□ -1.11
HOXC6-203ENST00000504315 SLC7A5P1Q8MH63 180 aa8.12□□□□□ -1.11
HOXC6-203ENST00000504315 IGKV2-28A0A075B6P5 120 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms