RNA–Protein interactions for RNA: ENST00000504224.5

RNF4-205, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-205ENST00000504224 UBE2D1P51668 147 aa13.24□□□□□ -0.29
RNF4-205ENST00000504224 RNF213Q63HN8 5207 aa13.23□□□□□ -0.29
RNF4-205ENST00000504224 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.23□□□□□ -0.29
RNF4-205ENST00000504224 LINC00614P0C842 121 aa13.23□□□□□ -0.29
RNF4-205ENST00000504224 RAB5BP61020 215 aa13.23□□□□□ -0.29
RNF4-205ENST00000504224 RNF151Q2KHN1 245 aa13.23□□□□□ -0.29
RNF4-205ENST00000504224 FA2HQ7L5A8 372 aa13.23□□□□□ -0.29
RNF4-205ENST00000504224 AMELXQ99217 191 aa13.22□□□□□ -0.29
RNF4-205ENST00000504224 MRPL35Q9NZE8 188 aaKnown RBP13.22□□□□□ -0.29
RNF4-205ENST00000504224 PSORS1C2Q9UIG4 136 aa13.22□□□□□ -0.29
RNF4-205ENST00000504224 IGIPA6NJ69 53 aa13.21□□□□□ -0.29
RNF4-205ENST00000504224 LINC00173Q6ZV60 143 aa13.21□□□□□ -0.29
RNF4-205ENST00000504224 BAGE3Q86Y29 109 aa13.21□□□□□ -0.29
RNF4-205ENST00000504224 TOMM6Q96B49 74 aa13.21□□□□□ -0.29
RNF4-205ENST00000504224 TIMM17AQ99595 171 aa13.21□□□□□ -0.29
RNF4-205ENST00000504224 LINC00310P59036 64 aa13.2□□□□□ -0.3
RNF4-205ENST00000504224 SEC11AP67812 179 aa13.2□□□□□ -0.3
RNF4-205ENST00000504224 C1orf137Q5JT78 98 aa13.2□□□□□ -0.3
RNF4-205ENST00000504224 ZC2HC1BQ5TFG8 222 aa13.2□□□□□ -0.3
RNF4-205ENST00000504224 PHF5AQ7RTV0 110 aaKnown RBP13.2□□□□□ -0.3
RNF4-205ENST00000504224 CHCHD1Q96BP2 118 aaKnown RBP13.2□□□□□ -0.3
RNF4-205ENST00000504224 LINC01549A6NIU2 74 aa13.19□□□□□ -0.3
RNF4-205ENST00000504224 LINC01561Q8N1V8 128 aa13.18□□□□□ -0.3
RNF4-205ENST00000504224 SCGB3A1Q96QR1 104 aa13.18□□□□□ -0.3
RNF4-205ENST00000504224 SERF1AO75920 110 aa13.17□□□□□ -0.3
RNF4-205ENST00000504224 PRSS2P07478 247 aa13.17□□□□□ -0.3
RNF4-205ENST00000504224 HERVK_113P63121 156 aa13.17□□□□□ -0.3
RNF4-205ENST00000504224 COA6Q5JTJ3 125 aaKnown RBP13.17□□□□□ -0.3
RNF4-205ENST00000504224 ERASQ7Z444 233 aa13.17□□□□□ -0.3
RNF4-205ENST00000504224 GEMIN7Q9H840 131 aaKnown RBP13.17□□□□□ -0.3
RNF4-205ENST00000504224 UNQ6190/PRO20217Q6UXQ8 127 aa13.16□□□□□ -0.3
RNF4-205ENST00000504224 PACRGQ96M98 296 aaPredicted RBP13.16□□□□□ -0.3
RNF4-205ENST00000504224 A0A096LNJ9 63 aa13.15□□□□□ -0.3
RNF4-205ENST00000504224 C10orf25Q5T742 122 aa13.15□□□□□ -0.3
RNF4-205ENST00000504224 NUPR1O60356 82 aa13.14□□□□□ -0.31
RNF4-205ENST00000504224 FAM19A3Q7Z5A8 133 aa13.14□□□□□ -0.31
RNF4-205ENST00000504224 TOMM7Q9P0U1 55 aa13.14□□□□□ -0.31
RNF4-205ENST00000504224 C6orf48Q9UBA6 75 aa13.14□□□□□ -0.31
RNF4-205ENST00000504224 TRBV30A0A0K0K1B3 111 aa13.13□□□□□ -0.31
RNF4-205ENST00000504224 HSBP1O75506 76 aa13.13□□□□□ -0.31
RNF4-205ENST00000504224 CKS1BP61024 79 aa13.13□□□□□ -0.31
RNF4-205ENST00000504224 KIAA0087Q14695 138 aa13.13□□□□□ -0.31
RNF4-205ENST00000504224 HBDP02042 147 aa13.12□□□□□ -0.31
RNF4-205ENST00000504224 TLX1NBP0CAT3 122 aa13.12□□□□□ -0.31
RNF4-205ENST00000504224 NDUFA6P56556 154 aa13.12□□□□□ -0.31
RNF4-205ENST00000504224 PMCHL1Q16048 86 aa13.12□□□□□ -0.31
RNF4-205ENST00000504224 C2orf82Q6UX34 121 aa13.12□□□□□ -0.31
RNF4-205ENST00000504224 FAM168BA1KXE4 195 aa13.1□□□□□ -0.31
RNF4-205ENST00000504224 IGLV7-43P04211 117 aa13.1□□□□□ -0.31
RNF4-205ENST00000504224 GAGE2EQ4V326 116 aa13.1□□□□□ -0.31
RNF4-205ENST00000504224 C6orf226Q5I0X4 101 aa13.1□□□□□ -0.31
RNF4-205ENST00000504224 LINC00469Q8N7U9 141 aa13.1□□□□□ -0.31
RNF4-205ENST00000504224 DIRC1Q969H9 104 aa13.1□□□□□ -0.31
RNF4-205ENST00000504224 GAGE2DQ9UEU5 116 aa13.1□□□□□ -0.31
RNF4-205ENST00000504224 CDKN2A-AS1Q9UH64 79 aa13.1□□□□□ -0.31
RNF4-205ENST00000504224 PDZD11Q5EBL8 140 aa13.09□□□□□ -0.31
RNF4-205ENST00000504224 FAM19A5Q7Z5A7 132 aaPredicted RBP13.09□□□□□ -0.31
RNF4-205ENST00000504224 Q8IZM0 81 aa13.09□□□□□ -0.31
RNF4-205ENST00000504224 FAM19A2Q8N3H0 131 aa13.09□□□□□ -0.31
RNF4-205ENST00000504224 PRR26Q8N8Z3 221 aa13.09□□□□□ -0.31
RNF4-205ENST00000504224 NDUFC2-KCTD14E9PQ53 114 aa13.07□□□□□ -0.32
RNF4-205ENST00000504224 TINCRA0A1B0GVN0 87 aa13.06□□□□□ -0.32
RNF4-205ENST00000504224 PMVKQ15126 192 aa13.06□□□□□ -0.32
RNF4-205ENST00000504224 KRTAP11-1Q8IUC1 163 aa13.05□□□□□ -0.32
RNF4-205ENST00000504224 CST9LQ9H4G1 147 aa13.05□□□□□ -0.32
RNF4-205ENST00000504224 H0Y9J4 135 aa13.04□□□□□ -0.32
RNF4-205ENST00000504224 S100A6P06703 90 aa13.04□□□□□ -0.32
RNF4-205ENST00000504224 CXCL5P42830 114 aa13.04□□□□□ -0.32
RNF4-205ENST00000504224 UBE2BP63146 152 aa13.03□□□□□ -0.32
RNF4-205ENST00000504224 SMIM1B2RUZ4 78 aa13.02□□□□□ -0.33
RNF4-205ENST00000504224 F8VRH5 84 aa13.02□□□□□ -0.33
RNF4-205ENST00000504224 ATP5LO75964 103 aa13.02□□□□□ -0.33
RNF4-205ENST00000504224 IGLV5-45A0A087WSX0 123 aa13.01□□□□□ -0.33
RNF4-205ENST00000504224 M0QXV9 152 aa13.01□□□□□ -0.33
RNF4-205ENST00000504224 LEPROTL1O95214 131 aa13.01□□□□□ -0.33
RNF4-205ENST00000504224 HIST3H2BBQ8N257 126 aa13.01□□□□□ -0.33
RNF4-205ENST00000504224 C5orf52A6NGY3 159 aa13□□□□□ -0.33
RNF4-205ENST00000504224 H3BRM9 83 aa13□□□□□ -0.33
RNF4-205ENST00000504224 COX7B2Q8TF08 81 aa13□□□□□ -0.33
RNF4-205ENST00000504224 SNRPEP62304 92 aaKnown RBP12.99□□□□□ -0.33
RNF4-205ENST00000504224 HSPB8Q9UJY1 196 aa12.99□□□□□ -0.33
RNF4-205ENST00000504224 SPINK8P0C7L1 97 aa12.98□□□□□ -0.33
RNF4-205ENST00000504224 KRTAP7-1Q8IUC3 87 aa12.98□□□□□ -0.33
RNF4-205ENST00000504224 IFI27L1Q96BM0 104 aa12.98□□□□□ -0.33
RNF4-205ENST00000504224 TMA7Q9Y2S6 64 aaKnown RBP12.98□□□□□ -0.33
RNF4-205ENST00000504224 FABP4P15090 132 aa12.97□□□□□ -0.33
RNF4-205ENST00000504224 C9orf129Q5T035 196 aaKnown RBP12.97□□□□□ -0.33
RNF4-205ENST00000504224 LPAP08519 4548 aa12.96□□□□□ -0.33
RNF4-205ENST00000504224 IGLV1-50A0A075B6I6 118 aa12.96□□□□□ -0.33
RNF4-205ENST00000504224 IGLC3P0DOY3 106 aa12.94□□□□□ -0.34
RNF4-205ENST00000504224 HIST1H2BLQ99880 126 aa12.94□□□□□ -0.34
RNF4-205ENST00000504224 KRTAP1-4P0C5Y4 121 aa12.93□□□□□ -0.34
RNF4-205ENST00000504224 S100A2P29034 98 aa12.93□□□□□ -0.34
RNF4-205ENST00000504224 XAGE1AQ9HD64 81 aa12.93□□□□□ -0.34
RNF4-205ENST00000504224 TRAV12-1A0A0B4J245 112 aa12.92□□□□□ -0.34
RNF4-205ENST00000504224 MAP1LC3CQ9BXW4 147 aa12.91□□□□□ -0.34
RNF4-205ENST00000504224 PRR4Q16378 134 aa12.9□□□□□ -0.34
RNF4-205ENST00000504224 ZNF22P17026 224 aaPredicted RBP12.89□□□□□ -0.35
RNF4-205ENST00000504224 RPL13AP40429 203 aaKnown RBP12.89□□□□□ -0.35
RNF4-205ENST00000504224 SYS1-DBNDD2H3BUS1 97 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms