RNA–Protein interactions for RNA: ENST00000503942.1

UBE3D-205, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 3

Gene UBE3D, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-205ENST00000503942 SMIM27A0A1W2PRY6 76 aa2.11□□□□□ -2.07
UBE3D-205ENST00000503942 F2Z2F3 143 aa2.11□□□□□ -2.07
UBE3D-205ENST00000503942 M0QY20 66 aa2.11□□□□□ -2.07
UBE3D-205ENST00000503942 NCR2O95944 276 aa2.11□□□□□ -2.07
UBE3D-205ENST00000503942 LINC00694P0DN24 101 aa2.11□□□□□ -2.07
UBE3D-205ENST00000503942 RHOHQ15669 191 aa2.11□□□□□ -2.07
UBE3D-205ENST00000503942 ZNF56Q15929 161 aa2.11□□□□□ -2.07
UBE3D-205ENST00000503942 C10orf91Q5T1B1 145 aa2.11□□□□□ -2.07
UBE3D-205ENST00000503942 MRPL54Q6P161 138 aaKnown RBP2.11□□□□□ -2.07
UBE3D-205ENST00000503942 ADM2Q7Z4H4 148 aa2.11□□□□□ -2.07
UBE3D-205ENST00000503942 WFDC10BQ8IUB3 73 aa2.11□□□□□ -2.07
UBE3D-205ENST00000503942 UBE2DNLQ8IWF7 75 aa2.11□□□□□ -2.07
UBE3D-205ENST00000503942 C15orf53Q8NAA6 179 aa2.11□□□□□ -2.07
UBE3D-205ENST00000503942 RPL39LQ96EH5 51 aaKnown RBP2.11□□□□□ -2.07
UBE3D-205ENST00000503942 DNAJC30Q96LL9 226 aa2.11□□□□□ -2.07
UBE3D-205ENST00000503942 AP1S3Q96PC3 154 aa2.11□□□□□ -2.07
UBE3D-205ENST00000503942 SEC11CQ9BY50 192 aa2.11□□□□□ -2.07
UBE3D-205ENST00000503942 PKD1P98161 4303 aa2.1□□□□□ -2.07
UBE3D-205ENST00000503942 LRP1BQ9NZR2 4599 aa2.1□□□□□ -2.07
UBE3D-205ENST00000503942 EPPK1P58107 5090 aaKnown RBP2.1□□□□□ -2.07
UBE3D-205ENST00000503942 A0A1B0GXF2 115 aa2.1□□□□□ -2.07
UBE3D-205ENST00000503942 C7orf77A4D0Y5 90 aa2.1□□□□□ -2.07
UBE3D-205ENST00000503942 H3BNG1 76 aa2.1□□□□□ -2.07
UBE3D-205ENST00000503942 APOC3P02656 99 aa2.1□□□□□ -2.07
UBE3D-205ENST00000503942 MT-ND4LP03901 98 aa2.1□□□□□ -2.07
UBE3D-205ENST00000503942 P0C880 135 aa2.1□□□□□ -2.07
UBE3D-205ENST00000503942 TRGC1P0CF51 173 aa2.1□□□□□ -2.07
UBE3D-205ENST00000503942 SMIM17P0DL12 118 aa2.1□□□□□ -2.07
UBE3D-205ENST00000503942 SRIP30626 198 aa2.1□□□□□ -2.07
UBE3D-205ENST00000503942 CCL18P55774 89 aa2.1□□□□□ -2.07
UBE3D-205ENST00000503942 TCTAP57738 103 aa2.1□□□□□ -2.07
UBE3D-205ENST00000503942 RAB4BP61018 213 aa2.1□□□□□ -2.07
UBE3D-205ENST00000503942 UBE2D3P61077 147 aa2.1□□□□□ -2.07
UBE3D-205ENST00000503942 UBE2D2P62837 147 aa2.1□□□□□ -2.07
UBE3D-205ENST00000503942 MRPL51Q4U2R6 128 aaKnown RBP2.1□□□□□ -2.07
UBE3D-205ENST00000503942 AMN1Q8IY45 258 aa2.1□□□□□ -2.07
UBE3D-205ENST00000503942 ATP6V0E2Q8NHE4 81 aa2.1□□□□□ -2.07
UBE3D-205ENST00000503942 PRADC1Q9BSG0 188 aa2.1□□□□□ -2.07
UBE3D-205ENST00000503942 DPH3P1Q9H4G8 78 aa2.1□□□□□ -2.07
UBE3D-205ENST00000503942 CARHSP1Q9Y2V2 147 aaKnown RBP2.1□□□□□ -2.07
UBE3D-205ENST00000503942 MRPS16Q9Y3D3 137 aaKnown RBP2.1□□□□□ -2.07
UBE3D-205ENST00000503942 URGCP-MRPS24S4R325 110 aa2.1□□□□□ -2.07
UBE3D-205ENST00000503942 PKHD1P08F94 4074 aa2.1□□□□□ -2.07
UBE3D-205ENST00000503942 TRBV7-3A0A075B6L6 115 aa2.09□□□□□ -2.07
UBE3D-205ENST00000503942 TRBV10-1A0A0K0K1A3 114 aa2.09□□□□□ -2.07
UBE3D-205ENST00000503942 NBDYA0A0U1RRE5 68 aa2.09□□□□□ -2.07
UBE3D-205ENST00000503942 IGHV3-30P01768 117 aa2.09□□□□□ -2.07
UBE3D-205ENST00000503942 IGHV3-33P01772 117 aa2.09□□□□□ -2.07
UBE3D-205ENST00000503942 IGHV3-30-3P0DP02 117 aa2.09□□□□□ -2.07
UBE3D-205ENST00000503942 IGHV3-30-5P0DP03 117 aa2.09□□□□□ -2.07
UBE3D-205ENST00000503942 FUSP35637 526 aaKnown RBP eCLIP2.09□□□□□ -2.07
UBE3D-205ENST00000503942 OR10J3Q5JRS4 329 aa2.09□□□□□ -2.07
UBE3D-205ENST00000503942 LELP1Q5T871 98 aa2.09□□□□□ -2.07
UBE3D-205ENST00000503942 RASL11AQ6T310 242 aa2.09□□□□□ -2.07
UBE3D-205ENST00000503942 IMMP2LQ96T52 175 aa2.09□□□□□ -2.07
UBE3D-205ENST00000503942 UPK3BQ9BT76 320 aa2.09□□□□□ -2.07
UBE3D-205ENST00000503942 TMEM191AQ9H0A3 160 aa2.09□□□□□ -2.07
UBE3D-205ENST00000503942 GTSF1LQ9H1H1 148 aa2.09□□□□□ -2.07
UBE3D-205ENST00000503942 NAT8BQ9UHF3 227 aa2.09□□□□□ -2.07
UBE3D-205ENST00000503942 R4GN34 69 aa2.09□□□□□ -2.07
UBE3D-205ENST00000503942 DNAH8Q96JB1 4490 aa2.08□□□□□ -2.08
UBE3D-205ENST00000503942 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.08□□□□□ -2.08
UBE3D-205ENST00000503942 TRBV6-8A0A0A6YYG3 113 aa2.08□□□□□ -2.08
UBE3D-205ENST00000503942 TGIF2-C20orf24A0A0A6YYL0 155 aa2.08□□□□□ -2.08
UBE3D-205ENST00000503942 IGKV2-24A0A0C4DH68 120 aa2.08□□□□□ -2.08
UBE3D-205ENST00000503942 LOC389332A0A1B0GUA5 103 aa2.08□□□□□ -2.08
UBE3D-205ENST00000503942 IGKV2-29A2NJV5 120 aaPredicted RBP2.08□□□□□ -2.08
UBE3D-205ENST00000503942 SDHAF1A6NFY7 115 aa2.08□□□□□ -2.08
UBE3D-205ENST00000503942 D6R8Y8 96 aa2.08□□□□□ -2.08
UBE3D-205ENST00000503942 NPYP01303 97 aa2.08□□□□□ -2.08
UBE3D-205ENST00000503942 IGKV4-1P06312 121 aa2.08□□□□□ -2.08
UBE3D-205ENST00000503942 HRES1P13985 223 aa2.08□□□□□ -2.08
UBE3D-205ENST00000503942 POLR2KP53803 58 aaKnown RBP2.08□□□□□ -2.08
UBE3D-205ENST00000503942 HBBP68871 147 aa2.08□□□□□ -2.08
UBE3D-205ENST00000503942 WFDC2Q14508 124 aa2.08□□□□□ -2.08
UBE3D-205ENST00000503942 Q6ZRN7 208 aaPredicted RBP2.08□□□□□ -2.08
UBE3D-205ENST00000503942 SMIM15Q7Z3B0 74 aa2.08□□□□□ -2.08
UBE3D-205ENST00000503942 NIT1Q86X76 327 aa2.08□□□□□ -2.08
UBE3D-205ENST00000503942 ZNF664Q8N3J9 261 aa2.08□□□□□ -2.08
UBE3D-205ENST00000503942 BORCS7Q96B45 105 aa2.08□□□□□ -2.08
UBE3D-205ENST00000503942 YPEL4Q96NS1 127 aa2.08□□□□□ -2.08
UBE3D-205ENST00000503942 TMEM70Q9BUB7 260 aa2.08□□□□□ -2.08
UBE3D-205ENST00000503942 NIT2Q9NQR4 276 aa2.08□□□□□ -2.08
UBE3D-205ENST00000503942 TMEM242Q9NWH2 141 aa2.08□□□□□ -2.08
UBE3D-205ENST00000503942 CRCT1Q9UGL9 99 aa2.08□□□□□ -2.08
UBE3D-205ENST00000503942 ZNF706Q9Y5V0 76 aaPredicted RBP2.08□□□□□ -2.08
UBE3D-205ENST00000503942 BIRC6Q9NR09 4857 aa2.07□□□□□ -2.08
UBE3D-205ENST00000503942 A0A087WWC5 75 aa2.07□□□□□ -2.08
UBE3D-205ENST00000503942 TRBV6-5A0A0K0K1A5 114 aa2.07□□□□□ -2.08
UBE3D-205ENST00000503942 TMEM262E9PQX1 116 aa2.07□□□□□ -2.08
UBE3D-205ENST00000503942 TCAPO15273 167 aa2.07□□□□□ -2.08
UBE3D-205ENST00000503942 CKS2P33552 79 aa2.07□□□□□ -2.08
UBE3D-205ENST00000503942 ELOBQ15370 118 aa2.07□□□□□ -2.08
UBE3D-205ENST00000503942 RHEBQ15382 184 aa2.07□□□□□ -2.08
UBE3D-205ENST00000503942 VAMP3Q15836 100 aa2.07□□□□□ -2.08
UBE3D-205ENST00000503942 IQCJQ1A5X6 159 aa2.07□□□□□ -2.08
UBE3D-205ENST00000503942 LINC01556Q5JQF7 62 aa2.07□□□□□ -2.08
UBE3D-205ENST00000503942 CLPSL2Q6UWE3 100 aa2.07□□□□□ -2.08
UBE3D-205ENST00000503942 ATP5L2Q7Z4Y8 100 aa2.07□□□□□ -2.08
UBE3D-205ENST00000503942 UBE2WQ96B02 151 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms