RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 TRACP01848 142 aa6.82□□□□□ -1.32
CLIP1-204ENST00000501271 PFN2P35080 140 aa6.82□□□□□ -1.32
CLIP1-204ENST00000501271 DEFB135Q30KP9 77 aa6.82□□□□□ -1.32
CLIP1-204ENST00000501271 NOTCH2Q04721 2471 aa6.82□□□□□ -1.32
CLIP1-204ENST00000501271 A0A1B0GUV1 79 aa6.82□□□□□ -1.32
CLIP1-204ENST00000501271 INAFM1C9JVW0 142 aa6.82□□□□□ -1.32
CLIP1-204ENST00000501271 SNCGO76070 127 aa6.82□□□□□ -1.32
CLIP1-204ENST00000501271 RPL28P46779 137 aaKnown RBP6.82□□□□□ -1.32
CLIP1-204ENST00000501271 C9orf66Q5T8R8 295 aa6.82□□□□□ -1.32
CLIP1-204ENST00000501271 TRRAPQ9Y4A5 3859 aa6.81□□□□□ -1.32
CLIP1-204ENST00000501271 PAX4O43316 350 aa6.81□□□□□ -1.32
CLIP1-204ENST00000501271 C15orf53Q8NAA6 179 aa6.81□□□□□ -1.32
CLIP1-204ENST00000501271 C22orf24Q9Y442 160 aa6.81□□□□□ -1.32
CLIP1-204ENST00000501271 FAM240AA0A1B0GVK7 77 aa6.8□□□□□ -1.32
CLIP1-204ENST00000501271 LYRM9A8MSI8 78 aa6.8□□□□□ -1.32
CLIP1-204ENST00000501271 SS18Q15532 418 aa6.8□□□□□ -1.32
CLIP1-204ENST00000501271 Q8N3U1 123 aa6.8□□□□□ -1.32
CLIP1-204ENST00000501271 C6orf226Q5I0X4 101 aa6.8□□□□□ -1.32
CLIP1-204ENST00000501271 TTC32Q5I0X7 151 aa6.8□□□□□ -1.32
CLIP1-204ENST00000501271 SMIM11BQ8TCY0 68 aa6.8□□□□□ -1.32
CLIP1-204ENST00000501271 IGHV4-28A0A0C4DH34 117 aa6.79□□□□□ -1.32
CLIP1-204ENST00000501271 Q9HAA7 133 aa6.79□□□□□ -1.32
CLIP1-204ENST00000501271 BAALC-AS2P0C853 105 aa6.79□□□□□ -1.32
CLIP1-204ENST00000501271 GAGE2BQ13066 116 aa6.79□□□□□ -1.32
CLIP1-204ENST00000501271 GAGE2EQ4V326 116 aa6.79□□□□□ -1.32
CLIP1-204ENST00000501271 Q8IZM0 81 aa6.79□□□□□ -1.32
CLIP1-204ENST00000501271 GAGE2DQ9UEU5 116 aa6.79□□□□□ -1.32
CLIP1-204ENST00000501271 CELA1Q9UNI1 258 aa6.79□□□□□ -1.32
CLIP1-204ENST00000501271 LINC00269Q8N2A0 174 aa6.78□□□□□ -1.32
CLIP1-204ENST00000501271 A0A087WYN8 130 aa6.78□□□□□ -1.32
CLIP1-204ENST00000501271 ATRQ13535 2644 aa6.78□□□□□ -1.32
CLIP1-204ENST00000501271 IGLV10-54A0A075B6I4 117 aa6.77□□□□□ -1.33
CLIP1-204ENST00000501271 APOC4P55056 127 aa6.77□□□□□ -1.33
CLIP1-204ENST00000501271 DAD1P61803 113 aa6.77□□□□□ -1.33
CLIP1-204ENST00000501271 Q8NAQ8 132 aa6.77□□□□□ -1.33
CLIP1-204ENST00000501271 ANAPC13Q9BS18 74 aa6.77□□□□□ -1.33
CLIP1-204ENST00000501271 TEP1Q99973 2627 aaKnown RBP6.76□□□□□ -1.33
CLIP1-204ENST00000501271 TRAV26-1A0A087WT03 109 aa6.76□□□□□ -1.33
CLIP1-204ENST00000501271 Q6Q795 121 aa6.76□□□□□ -1.33
CLIP1-204ENST00000501271 HIVEP1P15822 2718 aa6.76□□□□□ -1.33
CLIP1-204ENST00000501271 ANGP03950 147 aaKnown RBP6.76□□□□□ -1.33
CLIP1-204ENST00000501271 NHLRC4P0CG21 123 aaPredicted RBP6.76□□□□□ -1.33
CLIP1-204ENST00000501271 KIAA0087Q14695 138 aa6.76□□□□□ -1.33
CLIP1-204ENST00000501271 MRPL23Q16540 153 aaKnown RBP6.76□□□□□ -1.33
CLIP1-204ENST00000501271 CD164L2Q6UWJ8 174 aa6.76□□□□□ -1.33
CLIP1-204ENST00000501271 LINC01561Q8N1V8 128 aa6.76□□□□□ -1.33
CLIP1-204ENST00000501271 CHCHD10Q8WYQ3 142 aaPredicted RBP6.76□□□□□ -1.33
CLIP1-204ENST00000501271 MALP21145 153 aa6.75□□□□□ -1.33
CLIP1-204ENST00000501271 NDUFV3P56181 108 aaKnown RBP6.75□□□□□ -1.33
CLIP1-204ENST00000501271 REG3AQ06141 175 aa6.75□□□□□ -1.33
CLIP1-204ENST00000501271 OR13C6PQ8NH95 151 aa6.75□□□□□ -1.33
CLIP1-204ENST00000501271 ATP5G1P05496 136 aa6.75□□□□□ -1.33
CLIP1-204ENST00000501271 SMCR5Q8TEV8 140 aa6.74□□□□□ -1.33
CLIP1-204ENST00000501271 H0YGX0 51 aa6.74□□□□□ -1.33
CLIP1-204ENST00000501271 DNAL4O96015 105 aa6.74□□□□□ -1.33
CLIP1-204ENST00000501271 MIFP14174 115 aa6.74□□□□□ -1.33
CLIP1-204ENST00000501271 C9orf129Q5T035 196 aaKnown RBP6.74□□□□□ -1.33
CLIP1-204ENST00000501271 LECT2O14960 151 aa6.73□□□□□ -1.33
CLIP1-204ENST00000501271 ACYP1P07311 99 aa6.73□□□□□ -1.33
CLIP1-204ENST00000501271 HTN3P15516 51 aa6.73□□□□□ -1.33
CLIP1-204ENST00000501271 PRR3P79522 188 aaKnown RBP6.73□□□□□ -1.33
CLIP1-204ENST00000501271 C9orf116Q5BN46 136 aaPredicted RBP6.72□□□□□ -1.33
CLIP1-204ENST00000501271 TRBV7-7A0A0K0K1E9 115 aa6.71□□□□□ -1.33
CLIP1-204ENST00000501271 INAFM2P0DMQ5 153 aa6.71□□□□□ -1.33
CLIP1-204ENST00000501271 IGHV4-30-4P0DP06 118 aa6.71□□□□□ -1.33
CLIP1-204ENST00000501271 CXCL5P42830 114 aa6.71□□□□□ -1.33
CLIP1-204ENST00000501271 NANOS2P60321 138 aaKnown RBP6.71□□□□□ -1.33
CLIP1-204ENST00000501271 SPART-AS1P0CW21 52 aa6.71□□□□□ -1.34
CLIP1-204ENST00000501271 SLPIP03973 132 aa6.7□□□□□ -1.34
CLIP1-204ENST00000501271 COX17Q14061 63 aa6.7□□□□□ -1.34
CLIP1-204ENST00000501271 GAGE2AQ6NT46 116 aa6.7□□□□□ -1.34
CLIP1-204ENST00000501271 SDIM1Q6ZPB5 146 aa6.7□□□□□ -1.34
CLIP1-204ENST00000501271 Q8NDZ9 215 aa6.7□□□□□ -1.34
CLIP1-204ENST00000501271 LELP1Q5T871 98 aa6.7□□□□□ -1.34
CLIP1-204ENST00000501271 C6orf223Q8N319 242 aa6.69□□□□□ -1.34
CLIP1-204ENST00000501271 WFDC9Q8NEX5 89 aa6.69□□□□□ -1.34
CLIP1-204ENST00000501271 NDUFC2O95298 119 aa6.69□□□□□ -1.34
CLIP1-204ENST00000501271 C10orf25Q5T742 122 aa6.69□□□□□ -1.34
CLIP1-204ENST00000501271 LINC00526Q96FQ7 95 aa6.69□□□□□ -1.34
CLIP1-204ENST00000501271 OBSCN-AS1Q96MR7 158 aa6.69□□□□□ -1.34
CLIP1-204ENST00000501271 C14orf132Q9NPU4 83 aa6.69□□□□□ -1.34
CLIP1-204ENST00000501271 WIPF1O43516 503 aa6.68□□□□□ -1.34
CLIP1-204ENST00000501271 LINC00643Q86TS7 51 aa6.68□□□□□ -1.34
CLIP1-204ENST00000501271 NCR3O14931 201 aa6.68□□□□□ -1.34
CLIP1-204ENST00000501271 SPAG11BQ08648 103 aa6.68□□□□□ -1.34
CLIP1-204ENST00000501271 UNQ6190/PRO20217Q6UXQ8 127 aa6.68□□□□□ -1.34
CLIP1-204ENST00000501271 PRR34Q9NV39 138 aa6.68□□□□□ -1.34
CLIP1-204ENST00000501271 KLK12Q9UKR0 248 aa6.68□□□□□ -1.34
CLIP1-204ENST00000501271 ANK2Q01484 3957 aa6.68□□□□□ -1.34
CLIP1-204ENST00000501271 CCDC179H3BU77 68 aa6.67□□□□□ -1.34
CLIP1-204ENST00000501271 ENHOQ6UWT2 76 aa6.67□□□□□ -1.34
CLIP1-204ENST00000501271 ORMDL1Q9P0S3 153 aa6.67□□□□□ -1.34
CLIP1-204ENST00000501271 KLK5Q9Y337 293 aaPredicted RBP6.67□□□□□ -1.34
CLIP1-204ENST00000501271 TMEM126AQ9H061 195 aa6.66□□□□□ -1.34
CLIP1-204ENST00000501271 LYPD5Q6UWN5 251 aa6.66□□□□□ -1.34
CLIP1-204ENST00000501271 LINC00167Q96N53 147 aa6.66□□□□□ -1.34
CLIP1-204ENST00000501271 IMUPQ9GZP8 106 aa6.66□□□□□ -1.34
CLIP1-204ENST00000501271 RETNQ9HD89 108 aa6.66□□□□□ -1.34
CLIP1-204ENST00000501271 PKD1L1Q8TDX9 2849 aa6.65□□□□□ -1.34
CLIP1-204ENST00000501271 CYSRT1A8MQ03 144 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms