RNA–Protein interactions for RNA: ENST00000498724.5

TNC-208, Transcript of tenascin C, humanhuman

TSL 2

Gene TNC, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-208ENST00000498724 J3KT08 172 aa3.17□□□□□ -1.9
TNC-208ENST00000498724 IGHV4-31P0DP07 118 aa3.17□□□□□ -1.9
TNC-208ENST00000498724 LINC00158P58513 81 aa3.17□□□□□ -1.9
TNC-208ENST00000498724 DEFB136Q30KP8 78 aa3.17□□□□□ -1.9
TNC-208ENST00000498724 KHDC1LQ5JSQ8 128 aa3.17□□□□□ -1.9
TNC-208ENST00000498724 MIR7-3HGQ8N6C7 128 aa3.17□□□□□ -1.9
TNC-208ENST00000498724 Q9HAA7 133 aa3.17□□□□□ -1.9
TNC-208ENST00000498724 SND1-IT1Q9HBX3 110 aa3.17□□□□□ -1.9
TNC-208ENST00000498724 CDC42SE2Q9NRR3 84 aa3.17□□□□□ -1.9
TNC-208ENST00000498724 A0A096LNT2 108 aa3.16□□□□□ -1.9
TNC-208ENST00000498724 A0A1B0GX51 115 aa3.16□□□□□ -1.9
TNC-208ENST00000498724 PLA2G1BP04054 148 aaKnown RBP3.16□□□□□ -1.9
TNC-208ENST00000498724 C18orf65Q6ZTR6 163 aa3.16□□□□□ -1.9
TNC-208ENST00000498724 IL17DQ8TAD2 202 aa3.16□□□□□ -1.9
TNC-208ENST00000498724 C4orf3Q8WVX3 66 aa3.16□□□□□ -1.9
TNC-208ENST00000498724 TOMM7Q9P0U1 55 aa3.16□□□□□ -1.9
TNC-208ENST00000498724 XCL2Q9UBD3 114 aa3.16□□□□□ -1.9
TNC-208ENST00000498724 C22orf24Q9Y442 160 aa3.16□□□□□ -1.9
TNC-208ENST00000498724 ATRQ13535 2644 aa3.15□□□□□ -1.9
TNC-208ENST00000498724 NACAE9PAV3 2078 aa3.15□□□□□ -1.9
TNC-208ENST00000498724 A0A087WYN8 130 aa3.15□□□□□ -1.91
TNC-208ENST00000498724 TRAV25A0A0B4J276 109 aa3.15□□□□□ -1.91
TNC-208ENST00000498724 IGKV3D-7A0A0C4DH55 119 aa3.15□□□□□ -1.91
TNC-208ENST00000498724 IGKV3OR2-268A0A0C4DH90 116 aa3.15□□□□□ -1.91
TNC-208ENST00000498724 LECT2O14960 151 aa3.15□□□□□ -1.91
TNC-208ENST00000498724 CRYGAP11844 174 aa3.15□□□□□ -1.91
TNC-208ENST00000498724 HIST1H4AP62805 103 aaKnown RBP3.15□□□□□ -1.91
TNC-208ENST00000498724 RPL18AQ02543 176 aaKnown RBP3.15□□□□□ -1.91
TNC-208ENST00000498724 DEFB114Q30KQ6 69 aa3.15□□□□□ -1.91
TNC-208ENST00000498724 S100A7L2Q5SY68 101 aa3.15□□□□□ -1.91
TNC-208ENST00000498724 Q6YL49 198 aa3.15□□□□□ -1.91
TNC-208ENST00000498724 NTM-AS1Q6ZSK4 140 aa3.15□□□□□ -1.91
TNC-208ENST00000498724 STHQ8IWL8 128 aa3.15□□□□□ -1.91
TNC-208ENST00000498724 C1orf158Q8N1D5 194 aa3.15□□□□□ -1.91
TNC-208ENST00000498724 LINC00337Q8N6G1 96 aa3.15□□□□□ -1.91
TNC-208ENST00000498724 OR13C6PQ8NH95 151 aa3.15□□□□□ -1.91
TNC-208ENST00000498724 SMIM11BQ8TCY0 68 aa3.15□□□□□ -1.91
TNC-208ENST00000498724 C2orf48Q96LS8 159 aa3.15□□□□□ -1.91
TNC-208ENST00000498724 C14orf132Q9NPU4 83 aa3.15□□□□□ -1.91
TNC-208ENST00000498724 KLK5Q9Y337 293 aaPredicted RBP3.15□□□□□ -1.91
TNC-208ENST00000498724 MXRA5Q9NR99 2828 aa3.15□□□□□ -1.91
TNC-208ENST00000498724 IGKV2-28A0A075B6P5 120 aa3.14□□□□□ -1.91
TNC-208ENST00000498724 hADV29S1A0JD25 119 aa3.14□□□□□ -1.91
TNC-208ENST00000498724 IBA57-AS1B1ANH7 110 aa3.14□□□□□ -1.91
TNC-208ENST00000498724 IGKV2D-28P01615 120 aa3.14□□□□□ -1.91
TNC-208ENST00000498724 CCL18P55774 89 aa3.14□□□□□ -1.91
TNC-208ENST00000498724 TMEM258P61165 79 aa3.14□□□□□ -1.91
TNC-208ENST00000498724 Q6ZTI0 123 aa3.14□□□□□ -1.91
TNC-208ENST00000498724 SERP2Q8N6R1 65 aa3.14□□□□□ -1.91
TNC-208ENST00000498724 OBSCN-AS1Q96MR7 158 aa3.14□□□□□ -1.91
TNC-208ENST00000498724 NOP10Q9NPE3 64 aaKnown RBP3.14□□□□□ -1.91
TNC-208ENST00000498724 ORMDL1Q9P0S3 153 aa3.14□□□□□ -1.91
TNC-208ENST00000498724 PLA2G2DQ9UNK4 145 aa3.14□□□□□ -1.91
TNC-208ENST00000498724 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.14□□□□□ -1.91
TNC-208ENST00000498724 SVEP1Q4LDE5 3571 aa3.13□□□□□ -1.91
TNC-208ENST00000498724 TRGV2A0A075B6R0 118 aa3.13□□□□□ -1.91
TNC-208ENST00000498724 TRGV4A0A0C4DH28 118 aa3.13□□□□□ -1.91
TNC-208ENST00000498724 LOC107984640A0A0U1RRK4 108 aa3.13□□□□□ -1.91
TNC-208ENST00000498724 NCR3O14931 201 aa3.13□□□□□ -1.91
TNC-208ENST00000498724 FSHBP01225 129 aa3.13□□□□□ -1.91
TNC-208ENST00000498724 PFN2P35080 140 aa3.13□□□□□ -1.91
TNC-208ENST00000498724 CMC4P56277 68 aaPredicted RBP3.13□□□□□ -1.91
TNC-208ENST00000498724 RPS28P62857 69 aaKnown RBP3.13□□□□□ -1.91
TNC-208ENST00000498724 ODF3L2Q3SX64 289 aa3.13□□□□□ -1.91
TNC-208ENST00000498724 C5orf47Q569G3 176 aa3.13□□□□□ -1.91
TNC-208ENST00000498724 ATP5EP2Q5VTU8 51 aa3.13□□□□□ -1.91
TNC-208ENST00000498724 TMEM86BQ8N661 226 aa3.13□□□□□ -1.91
TNC-208ENST00000498724 C16orf74Q96GX8 76 aa3.13□□□□□ -1.91
TNC-208ENST00000498724 LINC00846Q9NV44 126 aa3.13□□□□□ -1.91
TNC-208ENST00000498724 A0A087WZ39 114 aa3.12□□□□□ -1.91
TNC-208ENST00000498724 LOC100131303A0A0U1RQF7 123 aa3.12□□□□□ -1.91
TNC-208ENST00000498724 TRBV6-4A0A1B0GX49 114 aa3.12□□□□□ -1.91
TNC-208ENST00000498724 SMIM9A6NGZ8 99 aa3.12□□□□□ -1.91
TNC-208ENST00000498724 USP17L23D6RBM5 183 aa3.12□□□□□ -1.91
TNC-208ENST00000498724 JMJD7-PLA2G4BH0Y9G9 81 aa3.12□□□□□ -1.91
TNC-208ENST00000498724 SLPIP03973 132 aa3.12□□□□□ -1.91
TNC-208ENST00000498724 CCKP06307 115 aa3.12□□□□□ -1.91
TNC-208ENST00000498724 C9orf129Q5T035 196 aaKnown RBP3.12□□□□□ -1.91
TNC-208ENST00000498724 FAM19A5Q7Z5A7 132 aaPredicted RBP3.12□□□□□ -1.91
TNC-208ENST00000498724 C11orf44Q8N8P7 122 aa3.12□□□□□ -1.91
TNC-208ENST00000498724 C11orf68Q9H3H3 251 aaKnown RBP3.12□□□□□ -1.91
TNC-208ENST00000498724 STAB1Q9NY15 2570 aa3.11□□□□□ -1.91
TNC-208ENST00000498724 NBEAL1Q6ZS30 2694 aa3.11□□□□□ -1.91
TNC-208ENST00000498724 IGLV4-60A0A075B6I1 120 aa3.11□□□□□ -1.91
TNC-208ENST00000498724 A0A087WVE0 104 aa3.11□□□□□ -1.91
TNC-208ENST00000498724 TRBV6-8A0A0A6YYG3 113 aa3.11□□□□□ -1.91
TNC-208ENST00000498724 IGHV3OR16-9A0A0B4J2B5 98 aa3.11□□□□□ -1.91
TNC-208ENST00000498724 GYPEP15421 78 aa3.11□□□□□ -1.91
TNC-208ENST00000498724 SS18Q15532 418 aa3.11□□□□□ -1.91
TNC-208ENST00000498724 C6orf226Q5I0X4 101 aa3.11□□□□□ -1.91
TNC-208ENST00000498724 LINC00167Q96N53 147 aa3.11□□□□□ -1.91
TNC-208ENST00000498724 UPK3BQ9BT76 320 aa3.11□□□□□ -1.91
TNC-208ENST00000498724 LINC00959A0A1B0GUT2 108 aa3.1□□□□□ -1.91
TNC-208ENST00000498724 A0A1W2PRX2 142 aa3.1□□□□□ -1.91
TNC-208ENST00000498724 NDUFC2-KCTD14E9PQ53 114 aa3.1□□□□□ -1.91
TNC-208ENST00000498724 RPL35AP18077 110 aaKnown RBP3.1□□□□□ -1.91
TNC-208ENST00000498724 Q8IZM0 81 aa3.1□□□□□ -1.91
TNC-208ENST00000498724 LINC01561Q8N1V8 128 aa3.1□□□□□ -1.91
TNC-208ENST00000498724 ANK2Q01484 3957 aa3.09□□□□□ -1.91
TNC-208ENST00000498724 TRAV23DV6A0A075B6W5 121 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms