RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 OTOGQ6ZRI0 2925 aa2.74□□□□□ -1.97
CLTC-209ENST00000498711 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.74□□□□□ -1.97
CLTC-209ENST00000498711 IGKV2-29A2NJV5 120 aaPredicted RBP2.74□□□□□ -1.97
CLTC-209ENST00000498711 KRTAP9-7A8MTY7 169 aa2.74□□□□□ -1.97
CLTC-209ENST00000498711 DAZ2Q13117 558 aaKnown RBP2.74□□□□□ -1.97
CLTC-209ENST00000498711 CIRBPQ14011 172 aaKnown RBP2.74□□□□□ -1.97
CLTC-209ENST00000498711 DEFB114Q30KQ6 69 aa2.74□□□□□ -1.97
CLTC-209ENST00000498711 DAZ4Q86SG3 579 aaKnown RBP2.74□□□□□ -1.97
CLTC-209ENST00000498711 C1orf158Q8N1D5 194 aa2.74□□□□□ -1.97
CLTC-209ENST00000498711 SMCR5Q8TEV8 140 aa2.74□□□□□ -1.97
CLTC-209ENST00000498711 C4orf3Q8WVX3 66 aa2.74□□□□□ -1.97
CLTC-209ENST00000498711 LINC00167Q96N53 147 aa2.74□□□□□ -1.97
CLTC-209ENST00000498711 DAZ3Q9NR90 486 aaKnown RBP2.74□□□□□ -1.97
CLTC-209ENST00000498711 VPREB3Q9UKI3 123 aa2.74□□□□□ -1.97
CLTC-209ENST00000498711 NACAE9PAV3 2078 aa2.74□□□□□ -1.97
CLTC-209ENST00000498711 NIPBLQ6KC79 2804 aaeCLIP2.74□□□□□ -1.97
CLTC-209ENST00000498711 MYO9AB2RTY4 2548 aa2.74□□□□□ -1.97
CLTC-209ENST00000498711 DEFB131AP59861 70 aa2.74□□□□□ -1.97
CLTC-209ENST00000498711 Q1RN00 199 aa2.74□□□□□ -1.97
CLTC-209ENST00000498711 DUX3Q96PT4 197 aa2.74□□□□□ -1.97
CLTC-209ENST00000498711 SS18L2Q9UHA2 77 aa2.74□□□□□ -1.97
CLTC-209ENST00000498711 CSPG4Q6UVK1 2322 aa2.74□□□□□ -1.97
CLTC-209ENST00000498711 NAV2Q8IVL1 2488 aa2.74□□□□□ -1.97
CLTC-209ENST00000498711 DNAJC9-AS1A6NH13 148 aa2.73□□□□□ -1.97
CLTC-209ENST00000498711 OVOL2Q9BRP0 275 aa2.73□□□□□ -1.97
CLTC-209ENST00000498711 ANK3Q12955 4377 aaKnown RBP2.73□□□□□ -1.97
CLTC-209ENST00000498711 H7C2G1 150 aa2.73□□□□□ -1.97
CLTC-209ENST00000498711 IGKV3-20P01619 116 aa2.73□□□□□ -1.97
CLTC-209ENST00000498711 FAM218AQ96MZ4 157 aa2.73□□□□□ -1.97
CLTC-209ENST00000498711 ACANP16112 2415 aa2.73□□□□□ -1.97
CLTC-209ENST00000498711 IGKV2-28A0A075B6P5 120 aa2.72□□□□□ -1.97
CLTC-209ENST00000498711 IGHV3-73A0A0B4J1V6 119 aa2.72□□□□□ -1.97
CLTC-209ENST00000498711 TRAV13-2A0A0B4J235 113 aa2.72□□□□□ -1.97
CLTC-209ENST00000498711 PLAC8L1A1L4L8 177 aa2.72□□□□□ -1.97
CLTC-209ENST00000498711 INSP01308 110 aa2.72□□□□□ -1.97
CLTC-209ENST00000498711 IGKV2D-28P01615 120 aa2.72□□□□□ -1.97
CLTC-209ENST00000498711 LINC00526Q96FQ7 95 aa2.72□□□□□ -1.97
CLTC-209ENST00000498711 SONP18583 2426 aaKnown RBP2.72□□□□□ -1.97
CLTC-209ENST00000498711 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.72□□□□□ -1.976e-9■■■■■ 41.4
CLTC-209ENST00000498711 NOTCH2Q04721 2471 aa2.72□□□□□ -1.97
CLTC-209ENST00000498711 K7EQD1 137 aa2.72□□□□□ -1.97
CLTC-209ENST00000498711 GIG44P09565 113 aaPredicted RBP2.72□□□□□ -1.97
CLTC-209ENST00000498711 BAALC-AS2P0C853 105 aa2.72□□□□□ -1.97
CLTC-209ENST00000498711 RNASE13Q5GAN3 156 aaKnown RBP2.72□□□□□ -1.97
CLTC-209ENST00000498711 C18orf65Q6ZTR6 163 aa2.72□□□□□ -1.97
CLTC-209ENST00000498711 C3orf22Q8N5N4 141 aa2.72□□□□□ -1.97
CLTC-209ENST00000498711 C16orf95Q9H693 158 aa2.72□□□□□ -1.97
CLTC-209ENST00000498711 ITPR3Q14573 2671 aa2.72□□□□□ -1.97
CLTC-209ENST00000498711 FLNBO75369 2602 aaKnown RBP2.72□□□□□ -1.97
CLTC-209ENST00000498711 PRM2P04554 102 aa2.72□□□□□ -1.97
CLTC-209ENST00000498711 CMC4P56277 68 aaPredicted RBP2.72□□□□□ -1.97
CLTC-209ENST00000498711 LYPD5Q6UWN5 251 aa2.72□□□□□ -1.97
CLTC-209ENST00000498711 LINC00612Q8N6U2 182 aa2.72□□□□□ -1.97
CLTC-209ENST00000498711 TRBV6-4A0A1B0GX49 114 aa2.71□□□□□ -1.98
CLTC-209ENST00000498711 A0A1B0GX51 115 aa2.71□□□□□ -1.98
CLTC-209ENST00000498711 H0YGX0 51 aa2.71□□□□□ -1.98
CLTC-209ENST00000498711 UQCRQO14949 82 aa2.71□□□□□ -1.98
CLTC-209ENST00000498711 INAFM2P0DMQ5 153 aa2.71□□□□□ -1.98
CLTC-209ENST00000498711 CRYGAP11844 174 aa2.71□□□□□ -1.98
CLTC-209ENST00000498711 RPS28P62857 69 aaKnown RBP2.71□□□□□ -1.98
CLTC-209ENST00000498711 MEIG1Q5JSS6 88 aa2.71□□□□□ -1.98
CLTC-209ENST00000498711 Q6JHZ5 121 aa2.71□□□□□ -1.98
CLTC-209ENST00000498711 CHCHD5Q9BSY4 110 aa2.71□□□□□ -1.98
CLTC-209ENST00000498711 KRTAP9-3Q9BYQ3 159 aa2.71□□□□□ -1.98
CLTC-209ENST00000498711 FLNAP21333 2647 aaKnown RBP2.71□□□□□ -1.98
CLTC-209ENST00000498711 IGHV3OR16-9A0A0B4J2B5 98 aa2.71□□□□□ -1.98
CLTC-209ENST00000498711 IGHV3-38A0A0C4DH36 116 aa2.71□□□□□ -1.98
CLTC-209ENST00000498711 IBA57-AS1B1ANH7 110 aa2.71□□□□□ -1.98
CLTC-209ENST00000498711 RPL36AP83881 106 aaKnown RBP2.71□□□□□ -1.98
CLTC-209ENST00000498711 LINC00337Q8N6G1 96 aa2.71□□□□□ -1.98
CLTC-209ENST00000498711 CSNK1G2-AS1Q8NCQ2 148 aa2.71□□□□□ -1.98
CLTC-209ENST00000498711 Q9HAA7 133 aa2.71□□□□□ -1.98
CLTC-209ENST00000498711 SETD2Q9BYW2 2564 aaPredicted RBP2.7□□□□□ -1.98
CLTC-209ENST00000498711 KRTAP24-1Q3LI83 254 aa2.7□□□□□ -1.98
CLTC-209ENST00000498711 LCE4AQ5TA78 99 aa2.7□□□□□ -1.98
CLTC-209ENST00000498711 COX7B2Q8TF08 81 aa2.7□□□□□ -1.98
CLTC-209ENST00000498711 UPK3BQ9BT76 320 aa2.7□□□□□ -1.98
CLTC-209ENST00000498711 KLK5Q9Y337 293 aaPredicted RBP2.7□□□□□ -1.98
CLTC-209ENST00000498711 ANK2Q01484 3957 aa2.7□□□□□ -1.98
CLTC-209ENST00000498711 COX7CP15954 63 aa2.7□□□□□ -1.98
CLTC-209ENST00000498711 NPC2P61916 151 aa2.7□□□□□ -1.98
CLTC-209ENST00000498711 F8P00451 2351 aa2.7□□□□□ -1.98
CLTC-209ENST00000498711 CCL18P55774 89 aa2.69□□□□□ -1.98
CLTC-209ENST00000498711 SS18Q15532 418 aa2.69□□□□□ -1.98
CLTC-209ENST00000498711 SMIM11BQ8TCY0 68 aa2.69□□□□□ -1.98
CLTC-209ENST00000498711 TMEM243Q9BU79 118 aa2.69□□□□□ -1.98
CLTC-209ENST00000498711 BCE1O60756 84 aa2.69□□□□□ -1.98
CLTC-209ENST00000498711 SMR3AQ99954 134 aa2.69□□□□□ -1.98
CLTC-209ENST00000498711 MTORP42345 2549 aa2.69□□□□□ -1.98
CLTC-209ENST00000498711 HIVEP1P15822 2718 aa2.69□□□□□ -1.98
CLTC-209ENST00000498711 CREBBPQ92793 2442 aa2.69□□□□□ -1.98
CLTC-209ENST00000498711 LOC100131303A0A0U1RQF7 123 aa2.69□□□□□ -1.98
CLTC-209ENST00000498711 FAM236AA0A1B0GUQ0 79 aa2.69□□□□□ -1.98
CLTC-209ENST00000498711 A0A1B0GUV1 79 aa2.69□□□□□ -1.98
CLTC-209ENST00000498711 FAM236BA0A1B0GV22 79 aa2.69□□□□□ -1.98
CLTC-209ENST00000498711 NDUFC2O95298 119 aa2.69□□□□□ -1.98
CLTC-209ENST00000498711 NANOS2P60321 138 aaKnown RBP2.69□□□□□ -1.98
CLTC-209ENST00000498711 Q6ZTI0 123 aa2.69□□□□□ -1.98
CLTC-209ENST00000498711 C16orf74Q96GX8 76 aa2.69□□□□□ -1.98
CLTC-209ENST00000498711 NSD1Q96L73 2696 aaPredicted RBP2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms