RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 NDUFA12Q9UI09 145 aa9.43□□□□□ -0.9
VPS26A-209ENST00000497564 SFTA2Q6UW10 78 aa9.42□□□□□ -0.9
VPS26A-209ENST00000497564 Q6ZR54 194 aa9.42□□□□□ -0.9
VPS26A-209ENST00000497564 RTL8CO15255 209 aa9.41□□□□□ -0.9
VPS26A-209ENST00000497564 HNRNPA3P51991 378 aaKnown RBP9.41□□□□□ -0.9
VPS26A-209ENST00000497564 KIAA0087Q14695 138 aa9.41□□□□□ -0.9
VPS26A-209ENST00000497564 ORAOV1Q8WV07 137 aa9.41□□□□□ -0.9
VPS26A-209ENST00000497564 ZNF625Q96I27 306 aaPredicted RBP9.41□□□□□ -0.9
VPS26A-209ENST00000497564 TM2D2Q9BX73 214 aa9.41□□□□□ -0.9
VPS26A-209ENST00000497564 HERC2O95714 4834 aa9.4□□□□□ -0.9
VPS26A-209ENST00000497564 CXCL5P42830 114 aa9.4□□□□□ -0.9
VPS26A-209ENST00000497564 HERV-K104P63124 156 aa9.4□□□□□ -0.9
VPS26A-209ENST00000497564 TOMM7Q9P0U1 55 aa9.4□□□□□ -0.9
VPS26A-209ENST00000497564 KIAA1109Q2LD37 5005 aa9.4□□□□□ -0.9
VPS26A-209ENST00000497564 PCP4L1A6NKN8 68 aa9.39□□□□□ -0.91
VPS26A-209ENST00000497564 PRSS2P07478 247 aa9.39□□□□□ -0.91
VPS26A-209ENST00000497564 A0A0J9YXY3 114 aa9.38□□□□□ -0.91
VPS26A-209ENST00000497564 SPAG11BQ08648 103 aa9.38□□□□□ -0.91
VPS26A-209ENST00000497564 C6orf226Q5I0X4 101 aa9.38□□□□□ -0.91
VPS26A-209ENST00000497564 CFAP161Q6P656 301 aa9.38□□□□□ -0.91
VPS26A-209ENST00000497564 SCGB1D4Q6XE38 83 aa9.38□□□□□ -0.91
VPS26A-209ENST00000497564 C15orf56Q8N910 161 aa9.38□□□□□ -0.91
VPS26A-209ENST00000497564 GVQW2A0A096LPI5 108 aaPredicted RBP9.37□□□□□ -0.91
VPS26A-209ENST00000497564 TIMM17BO60830 172 aa9.37□□□□□ -0.91
VPS26A-209ENST00000497564 F8WDY8 70 aa9.36□□□□□ -0.91
VPS26A-209ENST00000497564 C2orf48Q96LS8 159 aa9.36□□□□□ -0.91
VPS26A-209ENST00000497564 SPANXB1Q9NS25 103 aaPredicted RBP9.36□□□□□ -0.91
VPS26A-209ENST00000497564 A0A1B0GVY2 172 aa9.35□□□□□ -0.91
VPS26A-209ENST00000497564 CKS1BP61024 79 aa9.35□□□□□ -0.91
VPS26A-209ENST00000497564 NTN5Q8WTR8 489 aaPredicted RBP9.35□□□□□ -0.91
VPS26A-209ENST00000497564 LINC00587B1AMM8 73 aa9.34□□□□□ -0.91
VPS26A-209ENST00000497564 TMEM238C9JI98 176 aa9.34□□□□□ -0.91
VPS26A-209ENST00000497564 ZNF561-AS1K7EIQ3 104 aa9.34□□□□□ -0.91
VPS26A-209ENST00000497564 CTAG1AP78358 180 aa9.34□□□□□ -0.91
VPS26A-209ENST00000497564 HSD52Q0P140 79 aa9.34□□□□□ -0.91
VPS26A-209ENST00000497564 TAL2Q16559 108 aa9.34□□□□□ -0.91
VPS26A-209ENST00000497564 Q6ZRN7 208 aaPredicted RBP9.34□□□□□ -0.91
VPS26A-209ENST00000497564 LITAFQ99732 161 aa9.34□□□□□ -0.91
VPS26A-209ENST00000497564 USP17L23D6RBM5 183 aa9.33□□□□□ -0.92
VPS26A-209ENST00000497564 C2orf82Q6UX34 121 aa9.33□□□□□ -0.92
VPS26A-209ENST00000497564 LINC00336Q6ZUF6 198 aa9.33□□□□□ -0.92
VPS26A-209ENST00000497564 LRP1BQ9NZR2 4599 aa9.32□□□□□ -0.92
VPS26A-209ENST00000497564 CIRBPQ14011 172 aaKnown RBP9.32□□□□□ -0.92
VPS26A-209ENST00000497564 C1orf134Q5TEV5 83 aa9.32□□□□□ -0.92
VPS26A-209ENST00000497564 Q6ZVH6 145 aa9.32□□□□□ -0.92
VPS26A-209ENST00000497564 C6orf223Q8N319 242 aa9.32□□□□□ -0.92
VPS26A-209ENST00000497564 SPANXDQ9BXN6 97 aa9.32□□□□□ -0.92
VPS26A-209ENST00000497564 SPANXCQ9NY87 97 aa9.32□□□□□ -0.92
VPS26A-209ENST00000497564 DNAH5Q8TE73 4624 aa9.31□□□□□ -0.92
VPS26A-209ENST00000497564 PSCAO43653 123 aa9.31□□□□□ -0.92
VPS26A-209ENST00000497564 HIGD2BQ4VC39 106 aa9.31□□□□□ -0.92
VPS26A-209ENST00000497564 TRBV30A0A0K0K1B3 111 aa9.3□□□□□ -0.92
VPS26A-209ENST00000497564 COX17Q14061 63 aa9.3□□□□□ -0.92
VPS26A-209ENST00000497564 MEIG1Q5JSS6 88 aa9.3□□□□□ -0.92
VPS26A-209ENST00000497564 LINC00526Q96FQ7 95 aa9.3□□□□□ -0.92
VPS26A-209ENST00000497564 ERG28Q9UKR5 140 aa9.3□□□□□ -0.92
VPS26A-209ENST00000497564 M0R143 59 aa9.29□□□□□ -0.92
VPS26A-209ENST00000497564 SRSF9Q13242 221 aaKnown RBP eCLIP9.29□□□□□ -0.92
VPS26A-209ENST00000497564 C14orf177Q52M58 125 aa9.29□□□□□ -0.92
VPS26A-209ENST00000497564 ADAMTSL4-AS1Q5T5F5 129 aa9.29□□□□□ -0.92
VPS26A-209ENST00000497564 C10orf25Q5T742 122 aa9.29□□□□□ -0.92
VPS26A-209ENST00000497564 UNQ6190/PRO20217Q6UXQ8 127 aa9.29□□□□□ -0.92
VPS26A-209ENST00000497564 CAMK2N2Q96S95 79 aa9.29□□□□□ -0.92
VPS26A-209ENST00000497564 HIST1H4GQ99525 98 aa9.29□□□□□ -0.92
VPS26A-209ENST00000497564 PPDPFQ9H3Y8 114 aa9.29□□□□□ -0.92
VPS26A-209ENST00000497564 SMIM13P0DJ93 91 aa9.28□□□□□ -0.92
VPS26A-209ENST00000497564 PTTG1IPP53801 180 aa9.28□□□□□ -0.92
VPS26A-209ENST00000497564 TNP2Q05952 138 aa9.28□□□□□ -0.92
VPS26A-209ENST00000497564 CEND1Q8N111 149 aa9.28□□□□□ -0.92
VPS26A-209ENST00000497564 RYR1P21817 5038 aa9.28□□□□□ -0.92
VPS26A-209ENST00000497564 LRCOL1A6NCL2 159 aa9.27□□□□□ -0.93
VPS26A-209ENST00000497564 IFITM1P13164 125 aa9.27□□□□□ -0.93
VPS26A-209ENST00000497564 WFDC2Q14508 124 aa9.27□□□□□ -0.93
VPS26A-209ENST00000497564 RNF151Q2KHN1 245 aa9.27□□□□□ -0.93
VPS26A-209ENST00000497564 BVES-AS1Q5T3Y7 98 aa9.27□□□□□ -0.93
VPS26A-209ENST00000497564 C6orf48Q9UBA6 75 aa9.27□□□□□ -0.93
VPS26A-209ENST00000497564 HINT1P49773 126 aaPredicted RBP9.26□□□□□ -0.93
VPS26A-209ENST00000497564 SYCNQ0VAF6 134 aa9.26□□□□□ -0.93
VPS26A-209ENST00000497564 Q6ZRU5 148 aa9.26□□□□□ -0.93
VPS26A-209ENST00000497564 LECT2O14960 151 aa9.25□□□□□ -0.93
VPS26A-209ENST00000497564 LINC00158P58513 81 aa9.25□□□□□ -0.93
VPS26A-209ENST00000497564 MIR7-3HGQ8N6C7 128 aa9.25□□□□□ -0.93
VPS26A-209ENST00000497564 COPS9Q8WXC6 57 aa9.25□□□□□ -0.93
VPS26A-209ENST00000497564 CARD19Q96LW7 228 aa9.25□□□□□ -0.93
VPS26A-209ENST00000497564 SNHG12Q9BXW3 62 aa9.25□□□□□ -0.93
VPS26A-209ENST00000497564 HSPG2P98160 4391 aa9.25□□□□□ -0.93
VPS26A-209ENST00000497564 APOBP04114 4563 aaKnown RBP9.25□□□□□ -0.93
VPS26A-209ENST00000497564 SLPIP03973 132 aa9.24□□□□□ -0.93
VPS26A-209ENST00000497564 GCSHP23434 173 aa9.24□□□□□ -0.93
VPS26A-209ENST00000497564 PFN2P35080 140 aa9.24□□□□□ -0.93
VPS26A-209ENST00000497564 CNBPP62633 177 aaKnown RBP9.24□□□□□ -0.93
VPS26A-209ENST00000497564 C9orf116Q5BN46 136 aaPredicted RBP9.24□□□□□ -0.93
VPS26A-209ENST00000497564 LINC00308Q8TCZ7 52 aa9.24□□□□□ -0.93
VPS26A-209ENST00000497564 LOC107984156A0A0G2JMH3 177 aa9.23□□□□□ -0.93
VPS26A-209ENST00000497564 A0A0U1RRA0 63 aa9.23□□□□□ -0.93
VPS26A-209ENST00000497564 FXYD2P54710 66 aa9.23□□□□□ -0.93
VPS26A-209ENST00000497564 MUSTN1Q8IVN3 82 aa9.23□□□□□ -0.93
VPS26A-209ENST00000497564 ARL17AQ8IVW1 177 aa9.23□□□□□ -0.93
VPS26A-209ENST00000497564 DAND5Q8N907 189 aa9.23□□□□□ -0.93
VPS26A-209ENST00000497564 TMEM238LA0A1B0GVL6 79 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms