RNA–Protein interactions for RNA: ENST00000497527.1

HPS1-213, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-213ENST00000497527 COL5A1-AS1Q5SY13 56 aa8.16□□□□□ -1.1
HPS1-213ENST00000497527 KRTAP26-1Q6PEX3 210 aa8.16□□□□□ -1.1
HPS1-213ENST00000497527 SPANXDQ9BXN6 97 aa8.16□□□□□ -1.1
HPS1-213ENST00000497527 Q9HAA7 133 aa8.16□□□□□ -1.1
HPS1-213ENST00000497527 SPANXCQ9NY87 97 aa8.16□□□□□ -1.1
HPS1-213ENST00000497527 IFITM1P13164 125 aa8.15□□□□□ -1.1
HPS1-213ENST00000497527 ZNF561-AS1K7EIQ3 104 aa8.14□□□□□ -1.11
HPS1-213ENST00000497527 RPL24P83731 157 aaKnown RBP8.14□□□□□ -1.11
HPS1-213ENST00000497527 KIAA0087Q14695 138 aa8.14□□□□□ -1.11
HPS1-213ENST00000497527 C3orf84H3BNL1 204 aa8.13□□□□□ -1.11
HPS1-213ENST00000497527 PPDPFQ9H3Y8 114 aa8.13□□□□□ -1.11
HPS1-213ENST00000497527 NBDYA0A0U1RRE5 68 aa8.12□□□□□ -1.11
HPS1-213ENST00000497527 COX17Q14061 63 aa8.12□□□□□ -1.11
HPS1-213ENST00000497527 C2orf48Q96LS8 159 aa8.12□□□□□ -1.11
HPS1-213ENST00000497527 LITAFQ99732 161 aa8.12□□□□□ -1.11
HPS1-213ENST00000497527 ERG28Q9UKR5 140 aa8.12□□□□□ -1.11
HPS1-213ENST00000497527 DYNC2H1Q8NCM8 4307 aaKnown RBP8.12□□□□□ -1.11
HPS1-213ENST00000497527 GVQW2A0A096LPI5 108 aaPredicted RBP8.11□□□□□ -1.11
HPS1-213ENST00000497527 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.11□□□□□ -1.11
HPS1-213ENST00000497527 SMIM13P0DJ93 91 aa8.11□□□□□ -1.11
HPS1-213ENST00000497527 FXYD2P54710 66 aa8.11□□□□□ -1.11
HPS1-213ENST00000497527 NTN5Q8WTR8 489 aaPredicted RBP8.11□□□□□ -1.11
HPS1-213ENST00000497527 LINC00158P58513 81 aa8.1□□□□□ -1.11
HPS1-213ENST00000497527 TRBV30A0A0K0K1B3 111 aa8.09□□□□□ -1.11
HPS1-213ENST00000497527 PSCAO43653 123 aa8.09□□□□□ -1.11
HPS1-213ENST00000497527 ADAMTSL4-AS1Q5T5F5 129 aa8.09□□□□□ -1.11
HPS1-213ENST00000497527 C2orf82Q6UX34 121 aa8.09□□□□□ -1.11
HPS1-213ENST00000497527 MUSTN1Q8IVN3 82 aa8.09□□□□□ -1.11
HPS1-213ENST00000497527 C15orf56Q8N910 161 aa8.09□□□□□ -1.11
HPS1-213ENST00000497527 CAMK2N2Q96S95 79 aa8.09□□□□□ -1.11
HPS1-213ENST00000497527 NHP2Q9NX24 153 aaKnown RBP8.09□□□□□ -1.11
HPS1-213ENST00000497527 A0A0U1RRA0 63 aa8.07□□□□□ -1.12
HPS1-213ENST00000497527 A0A1B0GWB2 263 aa8.07□□□□□ -1.12
HPS1-213ENST00000497527 PFN2P35080 140 aa8.07□□□□□ -1.12
HPS1-213ENST00000497527 HIGD2BQ4VC39 106 aa8.07□□□□□ -1.12
HPS1-213ENST00000497527 C14orf177Q52M58 125 aa8.07□□□□□ -1.12
HPS1-213ENST00000497527 CASC10Q5T4H9 136 aa8.07□□□□□ -1.12
HPS1-213ENST00000497527 MIR7-3HGQ8N6C7 128 aa8.07□□□□□ -1.12
HPS1-213ENST00000497527 LINC00308Q8TCZ7 52 aa8.07□□□□□ -1.12
HPS1-213ENST00000497527 KRTAP1-5Q9BYS1 174 aa8.07□□□□□ -1.12
HPS1-213ENST00000497527 A0A0B4J2C4 111 aa8.06□□□□□ -1.12
HPS1-213ENST00000497527 A4D1N5 150 aa8.06□□□□□ -1.12
HPS1-213ENST00000497527 USP17L23D6RBM5 183 aa8.06□□□□□ -1.12
HPS1-213ENST00000497527 SYCNQ0VAF6 134 aa8.05□□□□□ -1.12
HPS1-213ENST00000497527 RNF151Q2KHN1 245 aa8.05□□□□□ -1.12
HPS1-213ENST00000497527 UNQ6190/PRO20217Q6UXQ8 127 aa8.05□□□□□ -1.12
HPS1-213ENST00000497527 C6orf223Q8N319 242 aa8.05□□□□□ -1.12
HPS1-213ENST00000497527 DAND5Q8N907 189 aa8.05□□□□□ -1.12
HPS1-213ENST00000497527 RAB37Q96AX2 223 aa8.05□□□□□ -1.12
HPS1-213ENST00000497527 NPC2P61916 151 aa8.04□□□□□ -1.12
HPS1-213ENST00000497527 LINC00526Q96FQ7 95 aa8.04□□□□□ -1.12
HPS1-213ENST00000497527 DNAH7Q8WXX0 4024 aa8.03□□□□□ -1.12
HPS1-213ENST00000497527 LOC107984156A0A0G2JMH3 177 aa8.03□□□□□ -1.12
HPS1-213ENST00000497527 TAX1BP3O14907 124 aa8.03□□□□□ -1.12
HPS1-213ENST00000497527 C10orf25Q5T742 122 aa8.03□□□□□ -1.12
HPS1-213ENST00000497527 ARL17AQ8IVW1 177 aa8.03□□□□□ -1.12
HPS1-213ENST00000497527 CARD19Q96LW7 228 aa8.03□□□□□ -1.12
HPS1-213ENST00000497527 C6orf48Q9UBA6 75 aa8.03□□□□□ -1.12
HPS1-213ENST00000497527 PRO1854Q9UHT4 67 aa8.03□□□□□ -1.12
HPS1-213ENST00000497527 C9orf118A6NHY6 69 aa8.02□□□□□ -1.13
HPS1-213ENST00000497527 Q6ZRU5 148 aa8.02□□□□□ -1.13
HPS1-213ENST00000497527 LINC00476Q8WZB0 136 aa8.02□□□□□ -1.13
HPS1-213ENST00000497527 SND1-IT1Q9HBX3 110 aa8.02□□□□□ -1.13
HPS1-213ENST00000497527 LY6G6CO95867 125 aa8.01□□□□□ -1.13
HPS1-213ENST00000497527 CFC1BP0CG36 223 aa8.01□□□□□ -1.13
HPS1-213ENST00000497527 CFC1P0CG37 223 aa8.01□□□□□ -1.13
HPS1-213ENST00000497527 SOSTDC1Q6X4U4 206 aa8.01□□□□□ -1.13
HPS1-213ENST00000497527 PKIGQ9Y2B9 76 aa8.01□□□□□ -1.13
HPS1-213ENST00000497527 K7ERJ3 54 aa8□□□□□ -1.13
HPS1-213ENST00000497527 NDUFC2O95298 119 aa8□□□□□ -1.13
HPS1-213ENST00000497527 C9orf116Q5BN46 136 aaPredicted RBP8□□□□□ -1.13
HPS1-213ENST00000497527 LYRM7Q5U5X0 104 aa8□□□□□ -1.13
HPS1-213ENST00000497527 Q6ZR54 194 aa8□□□□□ -1.13
HPS1-213ENST00000497527 TRAV13-2A0A0B4J235 113 aa7.99□□□□□ -1.13
HPS1-213ENST00000497527 NDUFC2-KCTD14E9PQ53 114 aa7.99□□□□□ -1.13
HPS1-213ENST00000497527 M0R2N4 97 aa7.99□□□□□ -1.13
HPS1-213ENST00000497527 TLX1NBP0CAT3 122 aa7.99□□□□□ -1.13
HPS1-213ENST00000497527 TGP01266 2768 aa7.99□□□□□ -1.13
HPS1-213ENST00000497527 Q6ZRN7 208 aaPredicted RBP7.98□□□□□ -1.13
HPS1-213ENST00000497527 PGPEP1Q9NXJ5 209 aa7.98□□□□□ -1.13
HPS1-213ENST00000497527 PLECQ15149 4684 aaKnown RBP7.97□□□□□ -1.13
HPS1-213ENST00000497527 A0A1B0GV90 55 aa7.97□□□□□ -1.13
HPS1-213ENST00000497527 H3BUT2 72 aa7.97□□□□□ -1.13
HPS1-213ENST00000497527 LECT2O14960 151 aa7.97□□□□□ -1.13
HPS1-213ENST00000497527 CNBPP62633 177 aaKnown RBP7.97□□□□□ -1.13
HPS1-213ENST00000497527 Q1RN00 199 aa7.97□□□□□ -1.13
HPS1-213ENST00000497527 C1orf134Q5TEV5 83 aa7.97□□□□□ -1.13
HPS1-213ENST00000497527 CSMD3Q7Z407 3707 aa7.96□□□□□ -1.13
HPS1-213ENST00000497527 EIF4EBP3O60516 100 aaPredicted RBP7.96□□□□□ -1.14
HPS1-213ENST00000497527 VPS13DQ5THJ4 4388 aa7.96□□□□□ -1.14
HPS1-213ENST00000497527 LOC107984640A0A0U1RRK4 108 aa7.95□□□□□ -1.14
HPS1-213ENST00000497527 TSPAN13O95857 204 aa7.95□□□□□ -1.14
HPS1-213ENST00000497527 FABP2P12104 132 aa7.95□□□□□ -1.14
HPS1-213ENST00000497527 RPL13AP40429 203 aaKnown RBP7.95□□□□□ -1.14
HPS1-213ENST00000497527 STARD9Q9P2P6 4700 aa7.95□□□□□ -1.14
HPS1-213ENST00000497527 DNAH1Q9P2D7 4330 aa7.94□□□□□ -1.14
HPS1-213ENST00000497527 A0A1W2PPM0 123 aa7.94□□□□□ -1.14
HPS1-213ENST00000497527 LRCOL1A6NCL2 159 aa7.94□□□□□ -1.14
HPS1-213ENST00000497527 COX6CP09669 75 aa7.94□□□□□ -1.14
HPS1-213ENST00000497527 VAMP3Q15836 100 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms