RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 PACRGQ96M98 296 aaPredicted RBP10.43□□□□□ -0.74
SMC4-226ENST00000497311 LINC01546A6NGU7 62 aa10.42□□□□□ -0.74
SMC4-226ENST00000497311 ATP6V1G1O75348 118 aa10.42□□□□□ -0.74
SMC4-226ENST00000497311 C2orf82Q6UX34 121 aa10.42□□□□□ -0.74
SMC4-226ENST00000497311 Q6ZN92 141 aa10.42□□□□□ -0.74
SMC4-226ENST00000497311 NDUFC2-KCTD14E9PQ53 114 aa10.41□□□□□ -0.74
SMC4-226ENST00000497311 M0QXV9 152 aa10.41□□□□□ -0.74
SMC4-226ENST00000497311 UBE2BP63146 152 aa10.41□□□□□ -0.74
SMC4-226ENST00000497311 TOMM6Q96B49 74 aa10.41□□□□□ -0.74
SMC4-226ENST00000497311 AMELXQ99217 191 aa10.41□□□□□ -0.74
SMC4-226ENST00000497311 VCX2Q9H322 139 aa10.41□□□□□ -0.74
SMC4-226ENST00000497311 H0Y9J4 135 aa10.4□□□□□ -0.74
SMC4-226ENST00000497311 S100A1P23297 94 aa10.4□□□□□ -0.74
SMC4-226ENST00000497311 ZC2HC1BQ5TFG8 222 aa10.4□□□□□ -0.74
SMC4-226ENST00000497311 LINC00173Q6ZV60 143 aa10.4□□□□□ -0.74
SMC4-226ENST00000497311 KRTAP7-1Q8IUC3 87 aa10.4□□□□□ -0.74
SMC4-226ENST00000497311 PRR26Q8N8Z3 221 aa10.4□□□□□ -0.74
SMC4-226ENST00000497311 TRAPPC1Q9Y5R8 145 aa10.4□□□□□ -0.74
SMC4-226ENST00000497311 PRSS2P07478 247 aa10.39□□□□□ -0.75
SMC4-226ENST00000497311 PAPPA-AS1Q5QFB9 102 aa10.39□□□□□ -0.75
SMC4-226ENST00000497311 SLC7A5P1Q8MH63 180 aa10.39□□□□□ -0.75
SMC4-226ENST00000497311 TIMM17AQ99595 171 aa10.39□□□□□ -0.75
SMC4-226ENST00000497311 LINC01549A6NIU2 74 aa10.38□□□□□ -0.75
SMC4-226ENST00000497311 C9orf129Q5T035 196 aaKnown RBP10.38□□□□□ -0.75
SMC4-226ENST00000497311 FA2HQ7L5A8 372 aa10.38□□□□□ -0.75
SMC4-226ENST00000497311 ERASQ7Z444 233 aa10.38□□□□□ -0.75
SMC4-226ENST00000497311 YPEL4Q96NS1 127 aa10.38□□□□□ -0.75
SMC4-226ENST00000497311 TOMM7Q9P0U1 55 aa10.38□□□□□ -0.75
SMC4-226ENST00000497311 CKS1BP61024 79 aa10.37□□□□□ -0.75
SMC4-226ENST00000497311 C6orf226Q5I0X4 101 aa10.37□□□□□ -0.75
SMC4-226ENST00000497311 SCGB3A1Q96QR1 104 aa10.37□□□□□ -0.75
SMC4-226ENST00000497311 SMCPP49901 116 aaPredicted RBP10.36□□□□□ -0.75
SMC4-226ENST00000497311 FAM19A3Q7Z5A8 133 aa10.36□□□□□ -0.75
SMC4-226ENST00000497311 SMCO4Q9NRQ5 59 aa10.36□□□□□ -0.75
SMC4-226ENST00000497311 IGLV1-50A0A075B6I6 118 aa10.35□□□□□ -0.75
SMC4-226ENST00000497311 Q8IZM0 81 aa10.35□□□□□ -0.75
SMC4-226ENST00000497311 C18orf32Q8TCD1 76 aa10.35□□□□□ -0.75
SMC4-226ENST00000497311 HERVK_113P63121 156 aa10.34□□□□□ -0.75
SMC4-226ENST00000497311 SEC11AP67812 179 aa10.34□□□□□ -0.75
SMC4-226ENST00000497311 LPAP08519 4548 aa10.33□□□□□ -0.76
SMC4-226ENST00000497311 KRTAP1-4P0C5Y4 121 aa10.32□□□□□ -0.76
SMC4-226ENST00000497311 LINC00614P0C842 121 aa10.32□□□□□ -0.76
SMC4-226ENST00000497311 CBLN2Q8IUK8 224 aa10.32□□□□□ -0.76
SMC4-226ENST00000497311 LINC00469Q8N7U9 141 aa10.32□□□□□ -0.76
SMC4-226ENST00000497311 URB1-AS1Q96HZ7 61 aa10.32□□□□□ -0.76
SMC4-226ENST00000497311 GEMIN7Q9H840 131 aaKnown RBP10.32□□□□□ -0.76
SMC4-226ENST00000497311 CDKN2A-AS1Q9UH64 79 aa10.32□□□□□ -0.76
SMC4-226ENST00000497311 RAB5BP61020 215 aa10.3□□□□□ -0.76
SMC4-226ENST00000497311 XAGE1AQ9HD64 81 aa10.3□□□□□ -0.76
SMC4-226ENST00000497311 C22orf24Q9Y442 160 aa10.3□□□□□ -0.76
SMC4-226ENST00000497311 A0A096LNJ9 63 aa10.29□□□□□ -0.76
SMC4-226ENST00000497311 F8VRH5 84 aa10.29□□□□□ -0.76
SMC4-226ENST00000497311 RPL13AP40429 203 aaKnown RBP10.29□□□□□ -0.76
SMC4-226ENST00000497311 LBHQ53QV2 105 aaPredicted RBP10.29□□□□□ -0.76
SMC4-226ENST00000497311 CST9LQ9H4G1 147 aa10.29□□□□□ -0.76
SMC4-226ENST00000497311 NUPR1O60356 82 aa10.28□□□□□ -0.76
SMC4-226ENST00000497311 ZNF861PO60384 105 aa10.28□□□□□ -0.76
SMC4-226ENST00000497311 TINCRA0A1B0GVN0 87 aa10.27□□□□□ -0.77
SMC4-226ENST00000497311 CXCL5P42830 114 aa10.27□□□□□ -0.77
SMC4-226ENST00000497311 PMVKQ15126 192 aa10.27□□□□□ -0.77
SMC4-226ENST00000497311 HBDP02042 147 aa10.26□□□□□ -0.77
SMC4-226ENST00000497311 PMCHL1Q16048 86 aa10.25□□□□□ -0.77
SMC4-226ENST00000497311 TP73-AS1Q9UF72 201 aa10.25□□□□□ -0.77
SMC4-226ENST00000497311 IGLV5-45A0A087WSX0 123 aa10.24□□□□□ -0.77
SMC4-226ENST00000497311 SMIM1B2RUZ4 78 aa10.24□□□□□ -0.77
SMC4-226ENST00000497311 PDZD11Q5EBL8 140 aa10.24□□□□□ -0.77
SMC4-226ENST00000497311 MRPL55Q7Z7F7 128 aaKnown RBP10.24□□□□□ -0.77
SMC4-226ENST00000497311 CHCHD1Q96BP2 118 aaKnown RBP10.23□□□□□ -0.77
SMC4-226ENST00000497311 ATP5LO75964 103 aa10.22□□□□□ -0.77
SMC4-226ENST00000497311 COX7B2Q8TF08 81 aa10.22□□□□□ -0.77
SMC4-226ENST00000497311 TRGC2P03986 189 aa10.21□□□□□ -0.77
SMC4-226ENST00000497311 NDUFA6P56556 154 aa10.21□□□□□ -0.77
SMC4-226ENST00000497311 BCE1O60756 84 aa10.2□□□□□ -0.78
SMC4-226ENST00000497311 IGLC3P0DOY3 106 aa10.2□□□□□ -0.78
SMC4-226ENST00000497311 RPL28P46779 137 aaKnown RBP10.2□□□□□ -0.78
SMC4-226ENST00000497311 PRR4Q16378 134 aa10.2□□□□□ -0.78
SMC4-226ENST00000497311 LCE2AQ5TA79 106 aaPredicted RBP10.2□□□□□ -0.78
SMC4-226ENST00000497311 COLCA2A8K830 154 aa10.19□□□□□ -0.78
SMC4-226ENST00000497311 LINC00167Q96N53 147 aa10.19□□□□□ -0.78
SMC4-226ENST00000497311 H3BRM9 83 aa10.18□□□□□ -0.78
SMC4-226ENST00000497311 SPINK8P0C7L1 97 aa10.18□□□□□ -0.78
SMC4-226ENST00000497311 BAGE3Q86Y29 109 aa10.18□□□□□ -0.78
SMC4-226ENST00000497311 RPL37AP8A6NKH3 93 aa10.17□□□□□ -0.78
SMC4-226ENST00000497311 GAGE10A6NGK3 116 aa10.16□□□□□ -0.78
SMC4-226ENST00000497311 HSBP1O75506 76 aa10.15□□□□□ -0.78
SMC4-226ENST00000497311 ZNF22P17026 224 aaPredicted RBP10.15□□□□□ -0.78
SMC4-226ENST00000497311 IGLV5-37A0A075B6J1 123 aa10.14□□□□□ -0.79
SMC4-226ENST00000497311 A0A087X002 238 aa10.14□□□□□ -0.79
SMC4-226ENST00000497311 TSPAN13O95857 204 aa10.14□□□□□ -0.79
SMC4-226ENST00000497311 CRYGAP11844 174 aa10.14□□□□□ -0.79
SMC4-226ENST00000497311 NKAPP1Q8N9T2 125 aa10.14□□□□□ -0.79
SMC4-226ENST00000497311 IFI27L1Q96BM0 104 aa10.14□□□□□ -0.79
SMC4-226ENST00000497311 IGLV5-39A0A0G2JS06 123 aa10.13□□□□□ -0.79
SMC4-226ENST00000497311 C11orf86A6NJI1 115 aa10.13□□□□□ -0.79
SMC4-226ENST00000497311 FAM19A2Q8N3H0 131 aa10.13□□□□□ -0.79
SMC4-226ENST00000497311 TYMSOSQ8TAI1 123 aa10.13□□□□□ -0.79
SMC4-226ENST00000497311 TRAV12-1A0A0B4J245 112 aa10.12□□□□□ -0.79
SMC4-226ENST00000497311 CHTOPQ9Y3Y2 248 aaKnown RBP10.12□□□□□ -0.79
SMC4-226ENST00000497311 SCO1O75880 301 aa10.11□□□□□ -0.79
SMC4-226ENST00000497311 SERF1AO75920 110 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms