RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 TOMM6Q96B49 74 aa8.68□□□□□ -1.02
VTI1A-209ENST00000496445 PACRGQ96M98 296 aaPredicted RBP8.68□□□□□ -1.02
VTI1A-209ENST00000496445 TRAV9-1A0A075B6T8 112 aa8.67□□□□□ -1.02
VTI1A-209ENST00000496445 Q8IZM0 81 aa8.67□□□□□ -1.02
VTI1A-209ENST00000496445 TOMM7Q9P0U1 55 aa8.67□□□□□ -1.02
VTI1A-209ENST00000496445 CDKN2A-AS1Q9UH64 79 aa8.67□□□□□ -1.02
VTI1A-209ENST00000496445 PRSS2P07478 247 aa8.66□□□□□ -1.02
VTI1A-209ENST00000496445 HERVK_113P63121 156 aa8.66□□□□□ -1.02
VTI1A-209ENST00000496445 LOC100996750A0A140TA64 210 aa8.65□□□□□ -1.02
VTI1A-209ENST00000496445 LINC01546A6NGU7 62 aa8.65□□□□□ -1.02
VTI1A-209ENST00000496445 KRTAP4-6Q9BYQ5 205 aa8.65□□□□□ -1.02
VTI1A-209ENST00000496445 H0Y9J4 135 aa8.64□□□□□ -1.03
VTI1A-209ENST00000496445 CKS1BP61024 79 aa8.64□□□□□ -1.03
VTI1A-209ENST00000496445 UBE2BP63146 152 aa8.64□□□□□ -1.03
VTI1A-209ENST00000496445 PAPPA-AS1Q5QFB9 102 aa8.64□□□□□ -1.03
VTI1A-209ENST00000496445 LINC00469Q8N7U9 141 aa8.64□□□□□ -1.03
VTI1A-209ENST00000496445 DIRC1Q969H9 104 aa8.64□□□□□ -1.03
VTI1A-209ENST00000496445 ALKBH7Q9BT30 221 aaPredicted RBP8.64□□□□□ -1.03
VTI1A-209ENST00000496445 SEC11CQ9BY50 192 aa8.64□□□□□ -1.03
VTI1A-209ENST00000496445 GNB1LQ9BYB4 327 aa8.64□□□□□ -1.03
VTI1A-209ENST00000496445 G0S2P27469 103 aa8.63□□□□□ -1.03
VTI1A-209ENST00000496445 SEC11AP67812 179 aa8.63□□□□□ -1.03
VTI1A-209ENST00000496445 C6orf226Q5I0X4 101 aa8.63□□□□□ -1.03
VTI1A-209ENST00000496445 ERASQ7Z444 233 aa8.63□□□□□ -1.03
VTI1A-209ENST00000496445 SCGB3A1Q96QR1 104 aa8.63□□□□□ -1.03
VTI1A-209ENST00000496445 SMIM1B2RUZ4 78 aa8.62□□□□□ -1.03
VTI1A-209ENST00000496445 PRR26Q8N8Z3 221 aa8.62□□□□□ -1.03
VTI1A-209ENST00000496445 GEMIN7Q9H840 131 aaKnown RBP8.62□□□□□ -1.03
VTI1A-209ENST00000496445 IGLV5-45A0A087WSX0 123 aa8.61□□□□□ -1.03
VTI1A-209ENST00000496445 F8VRH5 84 aa8.61□□□□□ -1.03
VTI1A-209ENST00000496445 KRTAP1-4P0C5Y4 121 aa8.61□□□□□ -1.03
VTI1A-209ENST00000496445 S100PP25815 95 aa8.61□□□□□ -1.03
VTI1A-209ENST00000496445 COMMD7Q86VX2 200 aa8.61□□□□□ -1.03
VTI1A-209ENST00000496445 XAGE1AQ9HD64 81 aa8.61□□□□□ -1.03
VTI1A-209ENST00000496445 TINCRA0A1B0GVN0 87 aa8.6□□□□□ -1.03
VTI1A-209ENST00000496445 C10orf91Q5T1B1 145 aa8.6□□□□□ -1.03
VTI1A-209ENST00000496445 C22orf24Q9Y442 160 aa8.6□□□□□ -1.03
VTI1A-209ENST00000496445 CXCL5P42830 114 aa8.59□□□□□ -1.03
VTI1A-209ENST00000496445 MRPL18Q9H0U6 180 aaKnown RBP8.59□□□□□ -1.03
VTI1A-209ENST00000496445 CST9LQ9H4G1 147 aa8.59□□□□□ -1.03
VTI1A-209ENST00000496445 PDZD11Q5EBL8 140 aa8.58□□□□□ -1.04
VTI1A-209ENST00000496445 COX7B2Q8TF08 81 aa8.58□□□□□ -1.04
VTI1A-209ENST00000496445 A0A096LNJ9 63 aa8.57□□□□□ -1.04
VTI1A-209ENST00000496445 LINC01549A6NIU2 74 aa8.57□□□□□ -1.04
VTI1A-209ENST00000496445 FABP9Q0Z7S8 132 aa8.57□□□□□ -1.04
VTI1A-209ENST00000496445 COX19Q49B96 90 aa8.57□□□□□ -1.04
VTI1A-209ENST00000496445 CARHSP1Q9Y2V2 147 aaKnown RBP8.57□□□□□ -1.04
VTI1A-209ENST00000496445 IGLV1-50A0A075B6I6 118 aa8.56□□□□□ -1.04
VTI1A-209ENST00000496445 GHRHP01286 108 aa8.56□□□□□ -1.04
VTI1A-209ENST00000496445 SPINK8P0C7L1 97 aa8.56□□□□□ -1.04
VTI1A-209ENST00000496445 PMVKQ15126 192 aa8.56□□□□□ -1.04
VTI1A-209ENST00000496445 RHEBQ15382 184 aa8.56□□□□□ -1.04
VTI1A-209ENST00000496445 FA2HQ7L5A8 372 aa8.56□□□□□ -1.04
VTI1A-209ENST00000496445 URB1-AS1Q96HZ7 61 aa8.55□□□□□ -1.04
VTI1A-209ENST00000496445 RPS10P5Q9NQ39 176 aa8.55□□□□□ -1.04
VTI1A-209ENST00000496445 TP73-AS1Q9UF72 201 aa8.55□□□□□ -1.04
VTI1A-209ENST00000496445 NUPR1O60356 82 aa8.54□□□□□ -1.04
VTI1A-209ENST00000496445 ZNF861PO60384 105 aa8.54□□□□□ -1.04
VTI1A-209ENST00000496445 LBHQ53QV2 105 aaPredicted RBP8.54□□□□□ -1.04
VTI1A-209ENST00000496445 MRPL55Q7Z7F7 128 aaKnown RBP8.54□□□□□ -1.04
VTI1A-209ENST00000496445 SMCO4Q9NRQ5 59 aa8.54□□□□□ -1.04
VTI1A-209ENST00000496445 IGLC3P0DOY3 106 aa8.53□□□□□ -1.04
VTI1A-209ENST00000496445 C18orf32Q8TCD1 76 aa8.52□□□□□ -1.05
VTI1A-209ENST00000496445 IGLV5-39A0A0G2JS06 123 aa8.51□□□□□ -1.05
VTI1A-209ENST00000496445 LINC00167Q96N53 147 aa8.51□□□□□ -1.05
VTI1A-209ENST00000496445 IGLV5-37A0A075B6J1 123 aa8.5□□□□□ -1.05
VTI1A-209ENST00000496445 H3BRM9 83 aa8.5□□□□□ -1.05
VTI1A-209ENST00000496445 BCE1O60756 84 aa8.5□□□□□ -1.05
VTI1A-209ENST00000496445 ZNF22P17026 224 aaPredicted RBP8.5□□□□□ -1.05
VTI1A-209ENST00000496445 RAB5BP61020 215 aa8.5□□□□□ -1.05
VTI1A-209ENST00000496445 PMCHL1Q16048 86 aa8.5□□□□□ -1.05
VTI1A-209ENST00000496445 TRAPPC1Q9Y5R8 145 aa8.5□□□□□ -1.05
VTI1A-209ENST00000496445 RPL37AP8A6NKH3 93 aa8.49□□□□□ -1.05
VTI1A-209ENST00000496445 HBDP02042 147 aa8.49□□□□□ -1.05
VTI1A-209ENST00000496445 RPL13AP40429 203 aaKnown RBP8.49□□□□□ -1.05
VTI1A-209ENST00000496445 GAGE10A6NGK3 116 aa8.48□□□□□ -1.05
VTI1A-209ENST00000496445 LINC00614P0C842 121 aa8.48□□□□□ -1.05
VTI1A-209ENST00000496445 MUC2Q02817 5179 aa8.47□□□□□ -1.05
VTI1A-209ENST00000496445 SCO1O75880 301 aa8.47□□□□□ -1.05
VTI1A-209ENST00000496445 ATP5LO75964 103 aa8.47□□□□□ -1.05
VTI1A-209ENST00000496445 NDUFA6P56556 154 aa8.47□□□□□ -1.05
VTI1A-209ENST00000496445 A0A087X002 238 aa8.46□□□□□ -1.06
VTI1A-209ENST00000496445 APOC3P02656 99 aa8.46□□□□□ -1.06
VTI1A-209ENST00000496445 PFN2P35080 140 aa8.46□□□□□ -1.06
VTI1A-209ENST00000496445 RPL28P46779 137 aaKnown RBP8.46□□□□□ -1.06
VTI1A-209ENST00000496445 KRTAP13-1Q8IUC0 172 aa8.46□□□□□ -1.06
VTI1A-209ENST00000496445 C11orf86A6NJI1 115 aa8.45□□□□□ -1.06
VTI1A-209ENST00000496445 NKAPP1Q8N9T2 125 aa8.45□□□□□ -1.06
VTI1A-209ENST00000496445 YPEL4Q96NS1 127 aa8.44□□□□□ -1.06
VTI1A-209ENST00000496445 ERG28Q9UKR5 140 aa8.44□□□□□ -1.06
VTI1A-209ENST00000496445 IGKV2-28A0A075B6P5 120 aa8.43□□□□□ -1.06
VTI1A-209ENST00000496445 IGKV2D-28P01615 120 aa8.43□□□□□ -1.06
VTI1A-209ENST00000496445 VPREB1P12018 145 aa8.43□□□□□ -1.06
VTI1A-209ENST00000496445 SVBPQ8N300 66 aa8.43□□□□□ -1.06
VTI1A-209ENST00000496445 Q8NDZ9 215 aa8.43□□□□□ -1.06
VTI1A-209ENST00000496445 SND1-IT1Q9HBX3 110 aa8.43□□□□□ -1.06
VTI1A-209ENST00000496445 SNAPINO95295 136 aa8.42□□□□□ -1.06
VTI1A-209ENST00000496445 XP32Q5T750 250 aa8.42□□□□□ -1.06
VTI1A-209ENST00000496445 BAGE3Q86Y29 109 aa8.42□□□□□ -1.06
VTI1A-209ENST00000496445 ZNF625Q96I27 306 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms