RNA–Protein interactions for RNA: ENST00000496423.1

ATG3-209, Transcript of autophagy related 3, humanhuman

TSL 5

Gene ATG3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-209ENST00000496423 TOMM7Q9P0U1 55 aa6.39□□□□□ -1.39
ATG3-209ENST00000496423 ZNF706Q9Y5V0 76 aaPredicted RBP6.39□□□□□ -1.39
ATG3-209ENST00000496423 USH2AO75445 5202 aa6.39□□□□□ -1.39
ATG3-209ENST00000496423 SYNE2Q8WXH0 6885 aaKnown RBP6.38□□□□□ -1.39
ATG3-209ENST00000496423 TRBV20OR9-2A0A075B6H5 130 aa6.38□□□□□ -1.39
ATG3-209ENST00000496423 KRTAP4-16G5E9R7 235 aaPredicted RBP6.38□□□□□ -1.39
ATG3-209ENST00000496423 SUMO2P61956 95 aaKnown RBP6.38□□□□□ -1.39
ATG3-209ENST00000496423 Q6ZN92 141 aa6.38□□□□□ -1.39
ATG3-209ENST00000496423 MANBALQ9NQG1 85 aa6.38□□□□□ -1.39
ATG3-209ENST00000496423 FAM213BQ8TBF2 198 aa6.37□□□□□ -1.39
ATG3-209ENST00000496423 TMEM191AQ9H0A3 160 aa6.37□□□□□ -1.39
ATG3-209ENST00000496423 MACF1Q9UPN3 7388 aaKnown RBP6.36□□□□□ -1.39
ATG3-209ENST00000496423 IGKV2-28A0A075B6P5 120 aa6.36□□□□□ -1.39
ATG3-209ENST00000496423 UMAD1C9J7I0 102 aa6.36□□□□□ -1.39
ATG3-209ENST00000496423 IGKV2D-28P01615 120 aa6.36□□□□□ -1.39
ATG3-209ENST00000496423 Q8N377 158 aa6.36□□□□□ -1.39
ATG3-209ENST00000496423 ALKBH7Q9BT30 221 aaPredicted RBP6.36□□□□□ -1.39
ATG3-209ENST00000496423 GEMIN7Q9H840 131 aaKnown RBP6.36□□□□□ -1.39
ATG3-209ENST00000496423 IGLV5-37A0A075B6J1 123 aa6.35□□□□□ -1.39
ATG3-209ENST00000496423 F8VRH5 84 aa6.35□□□□□ -1.39
ATG3-209ENST00000496423 RAB4AP20338 218 aa6.35□□□□□ -1.39
ATG3-209ENST00000496423 LINC01551Q86U37 167 aa6.35□□□□□ -1.39
ATG3-209ENST00000496423 Q8IZM0 81 aa6.35□□□□□ -1.39
ATG3-209ENST00000496423 HIGD2AQ9BW72 106 aa6.35□□□□□ -1.39
ATG3-209ENST00000496423 A8MWL6 223 aa6.34□□□□□ -1.39
ATG3-209ENST00000496423 PDE6DO43924 150 aa6.34□□□□□ -1.39
ATG3-209ENST00000496423 RPL39P62891 51 aaKnown RBP6.34□□□□□ -1.39
ATG3-209ENST00000496423 SPRR4Q96PI1 79 aa6.34□□□□□ -1.39
ATG3-209ENST00000496423 TMEM126AQ9H061 195 aa6.34□□□□□ -1.39
ATG3-209ENST00000496423 MED9Q9NWA0 146 aa6.34□□□□□ -1.39
ATG3-209ENST00000496423 FXYD6-FXYD2A0A087WZ82 144 aa6.33□□□□□ -1.4
ATG3-209ENST00000496423 IFI27P40305 119 aaPredicted RBP6.33□□□□□ -1.4
ATG3-209ENST00000496423 S100ZQ8WXG8 99 aa6.33□□□□□ -1.4
ATG3-209ENST00000496423 GNG13Q9P2W3 67 aa6.33□□□□□ -1.4
ATG3-209ENST00000496423 GATCO43716 136 aaKnown RBP6.32□□□□□ -1.4
ATG3-209ENST00000496423 CXCL5P42830 114 aa6.32□□□□□ -1.4
ATG3-209ENST00000496423 SVIPQ8NHG7 77 aa6.32□□□□□ -1.4
ATG3-209ENST00000496423 A0A1B0GUT8 65 aa6.31□□□□□ -1.4
ATG3-209ENST00000496423 TEX46H3BTG2 121 aa6.31□□□□□ -1.4
ATG3-209ENST00000496423 AMN1Q8IY45 258 aa6.31□□□□□ -1.4
ATG3-209ENST00000496423 C2orf88Q9BSF0 95 aa6.31□□□□□ -1.4
ATG3-209ENST00000496423 KRTAP4-7Q9BYR0 210 aa6.31□□□□□ -1.4
ATG3-209ENST00000496423 SMKR1H3BMG3 65 aa6.3□□□□□ -1.4
ATG3-209ENST00000496423 SSBP3-AS1Q7Z2R9 100 aa6.3□□□□□ -1.4
ATG3-209ENST00000496423 FAM104AQ969W3 186 aa6.3□□□□□ -1.4
ATG3-209ENST00000496423 C20orf78Q9BR46 151 aa6.3□□□□□ -1.4
ATG3-209ENST00000496423 TEX43Q6ZNM6 134 aa6.29□□□□□ -1.4
ATG3-209ENST00000496423 NRACQ8N912 160 aa6.29□□□□□ -1.4
ATG3-209ENST00000496423 TMEM141Q96I45 108 aa6.29□□□□□ -1.4
ATG3-209ENST00000496423 TMEM238C9JI98 176 aa6.28□□□□□ -1.4
ATG3-209ENST00000496423 LINC00299Q6ZSB3 139 aa6.28□□□□□ -1.4
ATG3-209ENST00000496423 FLGP20930 4061 aaPredicted RBP6.28□□□□□ -1.4
ATG3-209ENST00000496423 LINC00862A6NCI5 91 aa6.27□□□□□ -1.41
ATG3-209ENST00000496423 GIPP09681 153 aaPredicted RBP6.27□□□□□ -1.41
ATG3-209ENST00000496423 KRTAP6-3Q3LI67 103 aa6.27□□□□□ -1.41
ATG3-209ENST00000496423 Q5BKY6 102 aa6.27□□□□□ -1.41
ATG3-209ENST00000496423 OCC1Q8TAD7 63 aa6.27□□□□□ -1.41
ATG3-209ENST00000496423 PYGO1Q9Y3Y4 419 aa6.27□□□□□ -1.41
ATG3-209ENST00000496423 M0R378 163 aa6.26□□□□□ -1.41
ATG3-209ENST00000496423 SEC11AP67812 179 aa6.26□□□□□ -1.41
ATG3-209ENST00000496423 RPL24P83731 157 aaKnown RBP6.26□□□□□ -1.41
ATG3-209ENST00000496423 RIGQ13278 110 aa6.26□□□□□ -1.41
ATG3-209ENST00000496423 C9orf92A6NGG3 77 aa6.25□□□□□ -1.41
ATG3-209ENST00000496423 RAB5AP20339 215 aa6.25□□□□□ -1.41
ATG3-209ENST00000496423 RAB5BP61020 215 aa6.25□□□□□ -1.41
ATG3-209ENST00000496423 Q6Q795 121 aa6.25□□□□□ -1.41
ATG3-209ENST00000496423 EIF5A2Q9GZV4 153 aaKnown RBP6.25□□□□□ -1.41
ATG3-209ENST00000496423 IGLV4-3A0A075B6K6 122 aa6.24□□□□□ -1.41
ATG3-209ENST00000496423 TRBV24-1A0A075B6N3 115 aa6.24□□□□□ -1.41
ATG3-209ENST00000496423 HIGD1CA8MV81 97 aa6.24□□□□□ -1.41
ATG3-209ENST00000496423 K7EN84 100 aa6.24□□□□□ -1.41
ATG3-209ENST00000496423 SCO1O75880 301 aa6.24□□□□□ -1.41
ATG3-209ENST00000496423 CKS2P33552 79 aa6.24□□□□□ -1.41
ATG3-209ENST00000496423 FAM231DQ6ZW35 169 aa6.24□□□□□ -1.41
ATG3-209ENST00000496423 IGLV9-49A0A0B4J1Y8 123 aa6.23□□□□□ -1.41
ATG3-209ENST00000496423 HERVK_113P63121 156 aa6.23□□□□□ -1.41
ATG3-209ENST00000496423 MOBPQ13875 183 aa6.23□□□□□ -1.41
ATG3-209ENST00000496423 AKAP14Q86UN6 197 aa6.23□□□□□ -1.41
ATG3-209ENST00000496423 SMIM2Q9BVW6 85 aa6.23□□□□□ -1.41
ATG3-209ENST00000496423 VCX2Q9H322 139 aa6.23□□□□□ -1.41
ATG3-209ENST00000496423 ARPC5O15511 151 aa6.22□□□□□ -1.41
ATG3-209ENST00000496423 NPSP0C0P6 89 aa6.21□□□□□ -1.42
ATG3-209ENST00000496423 TAGLN2P37802 199 aaKnown RBP6.21□□□□□ -1.42
ATG3-209ENST00000496423 MRPL51Q4U2R6 128 aaKnown RBP6.21□□□□□ -1.42
ATG3-209ENST00000496423 KRTAP9-8Q9BYQ0 159 aa6.21□□□□□ -1.42
ATG3-209ENST00000496423 IGLV6-57P01721 117 aa6.2□□□□□ -1.42
ATG3-209ENST00000496423 FAM104BQ5XKR9 115 aa6.2□□□□□ -1.42
ATG3-209ENST00000496423 NDUFA13Q9P0J0 144 aa6.2□□□□□ -1.42
ATG3-209ENST00000496423 IFITM3Q01628 133 aa6.19□□□□□ -1.42
ATG3-209ENST00000496423 FAM19A3Q7Z5A8 133 aa6.19□□□□□ -1.42
ATG3-209ENST00000496423 SMCR5Q8TEV8 140 aa6.19□□□□□ -1.42
ATG3-209ENST00000496423 COX7B2Q8TF08 81 aa6.19□□□□□ -1.42
ATG3-209ENST00000496423 LIMD2Q9BT23 127 aa6.19□□□□□ -1.42
ATG3-209ENST00000496423 VPREB1P12018 145 aa6.18□□□□□ -1.42
ATG3-209ENST00000496423 LINC00483Q53H64 154 aa6.18□□□□□ -1.42
ATG3-209ENST00000496423 GAGE2AQ6NT46 116 aa6.18□□□□□ -1.42
ATG3-209ENST00000496423 CDKN2A-AS1Q9UH64 79 aa6.18□□□□□ -1.42
ATG3-209ENST00000496423 ATP5LO75964 103 aa6.17□□□□□ -1.42
ATG3-209ENST00000496423 PDZD11Q5EBL8 140 aa6.17□□□□□ -1.42
ATG3-209ENST00000496423 PAPPA-AS1Q5QFB9 102 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms