RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 KRTAP26-1Q6PEX3 210 aa11□□□□□ -0.65
HLA-A-208ENST00000496081 NPC2P61916 151 aa10.99□□□□□ -0.65
HLA-A-208ENST00000496081 SFTA2Q6UW10 78 aa10.99□□□□□ -0.65
HLA-A-208ENST00000496081 UPK3BQ9BT76 320 aa10.99□□□□□ -0.65
HLA-A-208ENST00000496081 APLNQ9ULZ1 77 aa10.99□□□□□ -0.65
HLA-A-208ENST00000496081 EIF4EBP3O60516 100 aaPredicted RBP10.98□□□□□ -0.65
HLA-A-208ENST00000496081 CFC1BP0CG36 223 aa10.98□□□□□ -0.65
HLA-A-208ENST00000496081 CFC1P0CG37 223 aa10.98□□□□□ -0.65
HLA-A-208ENST00000496081 C2orf82Q6UX34 121 aa10.98□□□□□ -0.65
HLA-A-208ENST00000496081 KLK5Q9Y337 293 aaPredicted RBP10.98□□□□□ -0.65
HLA-A-208ENST00000496081 APOMO95445 188 aa10.98□□□□□ -0.65
HLA-A-208ENST00000496081 NAA38Q9BRA0 125 aaKnown RBP10.98□□□□□ -0.65
HLA-A-208ENST00000496081 H3BUT2 72 aa10.97□□□□□ -0.65
HLA-A-208ENST00000496081 IFITM1P13164 125 aa10.97□□□□□ -0.65
HLA-A-208ENST00000496081 CKS1BP61024 79 aa10.96□□□□□ -0.65
HLA-A-208ENST00000496081 CFAP161Q6P656 301 aa10.96□□□□□ -0.65
HLA-A-208ENST00000496081 LINC00308Q8TCZ7 52 aa10.96□□□□□ -0.65
HLA-A-208ENST00000496081 IBA57-AS1B1ANH7 110 aa10.95□□□□□ -0.66
HLA-A-208ENST00000496081 UBE2V1Q13404 147 aa10.95□□□□□ -0.66
HLA-A-208ENST00000496081 C1orf43Q9BWL3 253 aa10.95□□□□□ -0.66
HLA-A-208ENST00000496081 CSMD3Q7Z407 3707 aa10.95□□□□□ -0.66
HLA-A-208ENST00000496081 CXCL5P42830 114 aa10.95□□□□□ -0.66
HLA-A-208ENST00000496081 DYNC2H1Q8NCM8 4307 aaKnown RBP10.95□□□□□ -0.66
HLA-A-208ENST00000496081 NUPR2A6NF83 97 aa10.94□□□□□ -0.66
HLA-A-208ENST00000496081 SPAG11BQ08648 103 aa10.94□□□□□ -0.66
HLA-A-208ENST00000496081 VAMP3Q15836 100 aa10.94□□□□□ -0.66
HLA-A-208ENST00000496081 SOSTDC1Q6X4U4 206 aa10.94□□□□□ -0.66
HLA-A-208ENST00000496081 TGP01266 2768 aa10.94□□□□□ -0.66
HLA-A-208ENST00000496081 IGKV2D-24A0A075B6R9 120 aa10.93□□□□□ -0.66
HLA-A-208ENST00000496081 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.93□□□□□ -0.66
HLA-A-208ENST00000496081 LINC00158P58513 81 aa10.93□□□□□ -0.66
HLA-A-208ENST00000496081 MIR7-3HGQ8N6C7 128 aa10.93□□□□□ -0.66
HLA-A-208ENST00000496081 Q9HAA7 133 aa10.93□□□□□ -0.66
HLA-A-208ENST00000496081 ERG28Q9UKR5 140 aa10.93□□□□□ -0.66
HLA-A-208ENST00000496081 PFN2P35080 140 aa10.93□□□□□ -0.66
HLA-A-208ENST00000496081 C6orf223Q8N319 242 aa10.93□□□□□ -0.66
HLA-A-208ENST00000496081 A0A0B4J2C4 111 aa10.92□□□□□ -0.66
HLA-A-208ENST00000496081 A0A1W2PPM0 123 aa10.92□□□□□ -0.66
HLA-A-208ENST00000496081 LINC00526Q96FQ7 95 aa10.92□□□□□ -0.66
HLA-A-208ENST00000496081 PGPEP1Q9NXJ5 209 aa10.92□□□□□ -0.66
HLA-A-208ENST00000496081 PRO1854Q9UHT4 67 aa10.92□□□□□ -0.66
HLA-A-208ENST00000496081 COPS9Q8WXC6 57 aa10.91□□□□□ -0.66
HLA-A-208ENST00000496081 TSPAN13O95857 204 aa10.9□□□□□ -0.67
HLA-A-208ENST00000496081 UNQ6190/PRO20217Q6UXQ8 127 aa10.9□□□□□ -0.67
HLA-A-208ENST00000496081 C15orf56Q8N910 161 aa10.9□□□□□ -0.67
HLA-A-208ENST00000496081 PPDPFQ9H3Y8 114 aa10.9□□□□□ -0.67
HLA-A-208ENST00000496081 C10orf25Q5T742 122 aa10.89□□□□□ -0.67
HLA-A-208ENST00000496081 UBE2DNLQ8IWF7 75 aa10.89□□□□□ -0.67
HLA-A-208ENST00000496081 NTN5Q8WTR8 489 aaPredicted RBP10.89□□□□□ -0.67
HLA-A-208ENST00000496081 DNAH7Q8WXX0 4024 aa10.88□□□□□ -0.67
HLA-A-208ENST00000496081 LYSTQ99698 3801 aa10.88□□□□□ -0.67
HLA-A-208ENST00000496081 FABP2P12104 132 aa10.88□□□□□ -0.67
HLA-A-208ENST00000496081 HIGD2BQ4VC39 106 aa10.88□□□□□ -0.67
HLA-A-208ENST00000496081 C9orf116Q5BN46 136 aaPredicted RBP10.88□□□□□ -0.67
HLA-A-208ENST00000496081 COX17Q14061 63 aa10.87□□□□□ -0.67
HLA-A-208ENST00000496081 TENM2Q9NT68 2774 aa10.87□□□□□ -0.67
HLA-A-208ENST00000496081 ZNF561-AS1K7EIQ3 104 aa10.86□□□□□ -0.67
HLA-A-208ENST00000496081 PLECQ15149 4684 aaKnown RBP10.86□□□□□ -0.67
HLA-A-208ENST00000496081 GTF2H5Q6ZYL4 71 aa10.85□□□□□ -0.67
HLA-A-208ENST00000496081 KRTAP1-5Q9BYS1 174 aa10.85□□□□□ -0.67
HLA-A-208ENST00000496081 GAGE10A6NGK3 116 aa10.84□□□□□ -0.67
HLA-A-208ENST00000496081 RMI2Q96E14 147 aa10.84□□□□□ -0.67
HLA-A-208ENST00000496081 SPCS1Q9Y6A9 102 aa10.84□□□□□ -0.67
HLA-A-208ENST00000496081 DNAH1Q9P2D7 4330 aa10.84□□□□□ -0.67
HLA-A-208ENST00000496081 GVQW2A0A096LPI5 108 aaPredicted RBP10.83□□□□□ -0.68
HLA-A-208ENST00000496081 H7C2G1 150 aa10.83□□□□□ -0.68
HLA-A-208ENST00000496081 K7EP34 96 aa10.83□□□□□ -0.68
HLA-A-208ENST00000496081 SND1-IT1Q9HBX3 110 aa10.83□□□□□ -0.68
HLA-A-208ENST00000496081 C6orf48Q9UBA6 75 aa10.83□□□□□ -0.68
HLA-A-208ENST00000496081 STARD9Q9P2P6 4700 aa10.83□□□□□ -0.68
HLA-A-208ENST00000496081 CASC10Q5T4H9 136 aa10.82□□□□□ -0.68
HLA-A-208ENST00000496081 CAMK2N2Q96S95 79 aa10.82□□□□□ -0.68
HLA-A-208ENST00000496081 LOC107984156A0A0G2JMH3 177 aa10.82□□□□□ -0.68
HLA-A-208ENST00000496081 ARL17AQ8IVW1 177 aa10.82□□□□□ -0.68
HLA-A-208ENST00000496081 C2orf48Q96LS8 159 aa10.82□□□□□ -0.68
HLA-A-208ENST00000496081 RPL13AP40429 203 aaKnown RBP10.8□□□□□ -0.68
HLA-A-208ENST00000496081 IGKV2-28A0A075B6P5 120 aa10.8□□□□□ -0.68
HLA-A-208ENST00000496081 TRBV30A0A0K0K1B3 111 aa10.8□□□□□ -0.68
HLA-A-208ENST00000496081 IGKV2D-28P01615 120 aa10.8□□□□□ -0.68
HLA-A-208ENST00000496081 Q1RN00 199 aa10.8□□□□□ -0.68
HLA-A-208ENST00000496081 Q6ZRU5 148 aa10.8□□□□□ -0.68
HLA-A-208ENST00000496081 WWC2-AS2Q96NR7 200 aa10.79□□□□□ -0.68
HLA-A-208ENST00000496081 USP17L23D6RBM5 183 aa10.78□□□□□ -0.68
HLA-A-208ENST00000496081 MUC7Q8TAX7 377 aa10.78□□□□□ -0.68
HLA-A-208ENST00000496081 F8WDY8 70 aa10.77□□□□□ -0.68
HLA-A-208ENST00000496081 PSMB2P49721 201 aa10.77□□□□□ -0.68
HLA-A-208ENST00000496081 LINC00337Q8N6G1 96 aa10.77□□□□□ -0.69
HLA-A-208ENST00000496081 TRAV13-2A0A0B4J235 113 aa10.75□□□□□ -0.69
HLA-A-208ENST00000496081 TRIAP1O43715 76 aa10.75□□□□□ -0.69
HLA-A-208ENST00000496081 SYCNQ0VAF6 134 aa10.75□□□□□ -0.69
HLA-A-208ENST00000496081 LYRM7Q5U5X0 104 aa10.75□□□□□ -0.69
HLA-A-208ENST00000496081 NBDYA0A0U1RRE5 68 aa10.75□□□□□ -0.69
HLA-A-208ENST00000496081 SCGB1C2P0DMR2 95 aa10.75□□□□□ -0.69
HLA-A-208ENST00000496081 H3BMG7 143 aa10.74□□□□□ -0.69
HLA-A-208ENST00000496081 LECT2O14960 151 aa10.74□□□□□ -0.69
HLA-A-208ENST00000496081 NDUFC2O95298 119 aa10.73□□□□□ -0.69
HLA-A-208ENST00000496081 SLPIP03973 132 aa10.73□□□□□ -0.69
HLA-A-208ENST00000496081 TTC32Q5I0X7 151 aa10.73□□□□□ -0.69
HLA-A-208ENST00000496081 Q8NDZ9 215 aa10.73□□□□□ -0.69
HLA-A-208ENST00000496081 TCL1BO95988 128 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms