RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 PTTG1IPP53801 180 aa16.25■□□□□ 0.19
PPP1R3F-205ENST00000495799 LITAFQ99732 161 aa16.25■□□□□ 0.19
PPP1R3F-205ENST00000495799 TMEM238LA0A1B0GVL6 79 aa16.24■□□□□ 0.19
PPP1R3F-205ENST00000495799 A6NDN8 102 aa16.24■□□□□ 0.19
PPP1R3F-205ENST00000495799 A6NJY4 79 aa16.24■□□□□ 0.19
PPP1R3F-205ENST00000495799 ZNF561-AS1K7EIQ3 104 aa16.24■□□□□ 0.19
PPP1R3F-205ENST00000495799 COL5A1-AS1Q5SY13 56 aa16.24■□□□□ 0.19
PPP1R3F-205ENST00000495799 COPS9Q8WXC6 57 aa16.24■□□□□ 0.19
PPP1R3F-205ENST00000495799 NBDYA0A0U1RRE5 68 aa16.23■□□□□ 0.19
PPP1R3F-205ENST00000495799 F8WDY8 70 aa16.22■□□□□ 0.19
PPP1R3F-205ENST00000495799 C3orf84H3BNL1 204 aa16.22■□□□□ 0.19
PPP1R3F-205ENST00000495799 IFITM1P13164 125 aa16.21■□□□□ 0.19
PPP1R3F-205ENST00000495799 FXYD2P54710 66 aa16.2■□□□□ 0.18
PPP1R3F-205ENST00000495799 RPL24P83731 157 aaKnown RBP16.2■□□□□ 0.18
PPP1R3F-205ENST00000495799 C2orf82Q6UX34 121 aa16.2■□□□□ 0.18
PPP1R3F-205ENST00000495799 KRTAP1-5Q9BYS1 174 aa16.2■□□□□ 0.18
PPP1R3F-205ENST00000495799 SMIM13P0DJ93 91 aa16.19■□□□□ 0.18
PPP1R3F-205ENST00000495799 ADAMTSL4-AS1Q5T5F5 129 aa16.19■□□□□ 0.18
PPP1R3F-205ENST00000495799 C15orf56Q8N910 161 aa16.19■□□□□ 0.18
PPP1R3F-205ENST00000495799 NTN5Q8WTR8 489 aaPredicted RBP16.19■□□□□ 0.18
PPP1R3F-205ENST00000495799 C2orf48Q96LS8 159 aa16.19■□□□□ 0.18
PPP1R3F-205ENST00000495799 ERG28Q9UKR5 140 aa16.19■□□□□ 0.18
PPP1R3F-205ENST00000495799 PLECQ15149 4684 aaKnown RBP16.19■□□□□ 0.18
PPP1R3F-205ENST00000495799 GVQW2A0A096LPI5 108 aaPredicted RBP16.19■□□□□ 0.18
PPP1R3F-205ENST00000495799 CSMD3Q7Z407 3707 aa16.18■□□□□ 0.18
PPP1R3F-205ENST00000495799 LINC00158P58513 81 aa16.18■□□□□ 0.18
PPP1R3F-205ENST00000495799 COX17Q14061 63 aa16.18■□□□□ 0.18
PPP1R3F-205ENST00000495799 CASC10Q5T4H9 136 aa16.18■□□□□ 0.18
PPP1R3F-205ENST00000495799 STARD9Q9P2P6 4700 aa16.17■□□□□ 0.18
PPP1R3F-205ENST00000495799 HIGD2BQ4VC39 106 aa16.17■□□□□ 0.18
PPP1R3F-205ENST00000495799 MUSTN1Q8IVN3 82 aa16.17■□□□□ 0.18
PPP1R3F-205ENST00000495799 A0A0U1RRA0 63 aa16.15■□□□□ 0.18
PPP1R3F-205ENST00000495799 C6orf223Q8N319 242 aa16.15■□□□□ 0.18
PPP1R3F-205ENST00000495799 CAMK2N2Q96S95 79 aa16.15■□□□□ 0.18
PPP1R3F-205ENST00000495799 PPDPFQ9H3Y8 114 aa16.15■□□□□ 0.18
PPP1R3F-205ENST00000495799 PSCAO43653 123 aa16.14■□□□□ 0.18
PPP1R3F-205ENST00000495799 NHP2Q9NX24 153 aaKnown RBP16.14■□□□□ 0.17
PPP1R3F-205ENST00000495799 USP17L23D6RBM5 183 aa16.13■□□□□ 0.17
PPP1R3F-205ENST00000495799 PFN2P35080 140 aa16.13■□□□□ 0.17
PPP1R3F-205ENST00000495799 UNQ6190/PRO20217Q6UXQ8 127 aa16.13■□□□□ 0.17
PPP1R3F-205ENST00000495799 MIR7-3HGQ8N6C7 128 aa16.13■□□□□ 0.17
PPP1R3F-205ENST00000495799 DAND5Q8N907 189 aa16.13■□□□□ 0.17
PPP1R3F-205ENST00000495799 LINC00308Q8TCZ7 52 aa16.13■□□□□ 0.17
PPP1R3F-205ENST00000495799 LINC00526Q96FQ7 95 aa16.13■□□□□ 0.17
PPP1R3F-205ENST00000495799 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.12■□□□□ 0.17
PPP1R3F-205ENST00000495799 TRBV30A0A0K0K1B3 111 aa16.12■□□□□ 0.17
PPP1R3F-205ENST00000495799 DNAH1Q9P2D7 4330 aa16.1■□□□□ 0.17
PPP1R3F-205ENST00000495799 A4D1N5 150 aa16.09■□□□□ 0.17
PPP1R3F-205ENST00000495799 NPC2P61916 151 aa16.09■□□□□ 0.17
PPP1R3F-205ENST00000495799 A0A1B0GWB2 263 aa16.09■□□□□ 0.17
PPP1R3F-205ENST00000495799 C10orf25Q5T742 122 aa16.09■□□□□ 0.17
PPP1R3F-205ENST00000495799 C6orf48Q9UBA6 75 aa16.07■□□□□ 0.16
PPP1R3F-205ENST00000495799 LY6G6CO95867 125 aa16.06■□□□□ 0.16
PPP1R3F-205ENST00000495799 SYCNQ0VAF6 134 aa16.06■□□□□ 0.16
PPP1R3F-205ENST00000495799 C14orf177Q52M58 125 aa16.06■□□□□ 0.16
PPP1R3F-205ENST00000495799 LINC00476Q8WZB0 136 aa16.06■□□□□ 0.16
PPP1R3F-205ENST00000495799 VPS13DQ5THJ4 4388 aa16.06■□□□□ 0.16
PPP1R3F-205ENST00000495799 A0A0B4J2C4 111 aa16.04■□□□□ 0.16
PPP1R3F-205ENST00000495799 Q6ZRU5 148 aa16.04■□□□□ 0.16
PPP1R3F-205ENST00000495799 M0R2N4 97 aa16.04■□□□□ 0.16
PPP1R3F-205ENST00000495799 C9orf116Q5BN46 136 aaPredicted RBP16.04■□□□□ 0.16
PPP1R3F-205ENST00000495799 RAB37Q96AX2 223 aa16.04■□□□□ 0.16
PPP1R3F-205ENST00000495799 TAX1BP3O14907 124 aa16.03■□□□□ 0.16
PPP1R3F-205ENST00000495799 CFC1BP0CG36 223 aa16.03■□□□□ 0.16
PPP1R3F-205ENST00000495799 CFC1P0CG37 223 aa16.03■□□□□ 0.16
PPP1R3F-205ENST00000495799 RNF151Q2KHN1 245 aa16.03■□□□□ 0.16
PPP1R3F-205ENST00000495799 SOSTDC1Q6X4U4 206 aa16.03■□□□□ 0.16
PPP1R3F-205ENST00000495799 CARD19Q96LW7 228 aa16.03■□□□□ 0.16
PPP1R3F-205ENST00000495799 K7ERJ3 54 aa16.02■□□□□ 0.15
PPP1R3F-205ENST00000495799 Q6ZR54 194 aa16.02■□□□□ 0.15
PPP1R3F-205ENST00000495799 LYSTQ99698 3801 aa16.01■□□□□ 0.15
PPP1R3F-205ENST00000495799 LECT2O14960 151 aa16■□□□□ 0.15
PPP1R3F-205ENST00000495799 LOC107984156A0A0G2JMH3 177 aa15.99■□□□□ 0.15
PPP1R3F-205ENST00000495799 ARL17AQ8IVW1 177 aa15.99■□□□□ 0.15
PPP1R3F-205ENST00000495799 EIF4EBP3O60516 100 aaPredicted RBP15.99■□□□□ 0.15
PPP1R3F-205ENST00000495799 Q6ZRN7 208 aaPredicted RBP15.99■□□□□ 0.15
PPP1R3F-205ENST00000495799 SND1-IT1Q9HBX3 110 aa15.99■□□□□ 0.15
PPP1R3F-205ENST00000495799 PRO1854Q9UHT4 67 aa15.99■□□□□ 0.15
PPP1R3F-205ENST00000495799 C9orf118A6NHY6 69 aa15.97■□□□□ 0.15
PPP1R3F-205ENST00000495799 TENM2Q9NT68 2774 aa15.97■□□□□ 0.15
PPP1R3F-205ENST00000495799 NDUFC2-KCTD14E9PQ53 114 aa15.96■□□□□ 0.15
PPP1R3F-205ENST00000495799 TGP01266 2768 aa15.95■□□□□ 0.14
PPP1R3F-205ENST00000495799 WFDC2Q14508 124 aa15.94■□□□□ 0.14
PPP1R3F-205ENST00000495799 NDUFC2O95298 119 aa15.93■□□□□ 0.14
PPP1R3F-205ENST00000495799 TLX1NBP0CAT3 122 aa15.93■□□□□ 0.14
PPP1R3F-205ENST00000495799 PGPEP1Q9NXJ5 209 aa15.93■□□□□ 0.14
PPP1R3F-205ENST00000495799 CNBPP62633 177 aaKnown RBP15.92■□□□□ 0.14
PPP1R3F-205ENST00000495799 C1orf134Q5TEV5 83 aa15.92■□□□□ 0.14
PPP1R3F-205ENST00000495799 TRAV13-2A0A0B4J235 113 aa15.91■□□□□ 0.14
PPP1R3F-205ENST00000495799 A0A1B0GV90 55 aa15.91■□□□□ 0.14
PPP1R3F-205ENST00000495799 LRCOL1A6NCL2 159 aa15.91■□□□□ 0.14
PPP1R3F-205ENST00000495799 SLPIP03973 132 aa15.91■□□□□ 0.14
PPP1R3F-205ENST00000495799 H3BUT2 72 aa15.9■□□□□ 0.14
PPP1R3F-205ENST00000495799 ALMS1Q8TCU4 4167 aa15.88■□□□□ 0.13
PPP1R3F-205ENST00000495799 TSPAN13O95857 204 aa15.88■□□□□ 0.13
PPP1R3F-205ENST00000495799 Q1RN00 199 aa15.88■□□□□ 0.13
PPP1R3F-205ENST00000495799 LOC107984640A0A0U1RRK4 108 aa15.86■□□□□ 0.13
PPP1R3F-205ENST00000495799 RPL13AP40429 203 aaKnown RBP15.86■□□□□ 0.13
PPP1R3F-205ENST00000495799 PKIGQ9Y2B9 76 aa15.86■□□□□ 0.13
PPP1R3F-205ENST00000495799 RPL18AQ02543 176 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms