RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 FAM110AQ9BQ89 295 aa9.06□□□□□ -0.96
PTPN7-217ENST00000495688 C16orf95Q9H693 158 aa9.06□□□□□ -0.96
PTPN7-217ENST00000495688 PF4P02776 101 aa9.05□□□□□ -0.96
PTPN7-217ENST00000495688 GYPEP15421 78 aa9.05□□□□□ -0.96
PTPN7-217ENST00000495688 FAM222AQ5U5X8 452 aa9.05□□□□□ -0.96
PTPN7-217ENST00000495688 TRRAPQ9Y4A5 3859 aa9.05□□□□□ -0.96
PTPN7-217ENST00000495688 MALP21145 153 aa9.05□□□□□ -0.96
PTPN7-217ENST00000495688 OTOGQ6ZRI0 2925 aa9.05□□□□□ -0.96
PTPN7-217ENST00000495688 PAX4O43316 350 aa9.04□□□□□ -0.96
PTPN7-217ENST00000495688 PPDPFQ9H3Y8 114 aa9.04□□□□□ -0.96
PTPN7-217ENST00000495688 IBA57-AS1B1ANH7 110 aa9.04□□□□□ -0.96
PTPN7-217ENST00000495688 C6orf226Q5I0X4 101 aa9.04□□□□□ -0.96
PTPN7-217ENST00000495688 GAGE2AQ6NT46 116 aa9.04□□□□□ -0.96
PTPN7-217ENST00000495688 FAM236AA0A1B0GUQ0 79 aa9.03□□□□□ -0.96
PTPN7-217ENST00000495688 FAM236BA0A1B0GV22 79 aa9.03□□□□□ -0.96
PTPN7-217ENST00000495688 ACYP1P07311 99 aa9.03□□□□□ -0.96
PTPN7-217ENST00000495688 OR13C6PQ8NH95 151 aa9.03□□□□□ -0.96
PTPN7-217ENST00000495688 HECTD1Q9ULT8 2610 aa9.03□□□□□ -0.96
PTPN7-217ENST00000495688 KRTAP10-3P60369 221 aa9.02□□□□□ -0.97
PTPN7-217ENST00000495688 SMR3AQ99954 134 aa9.02□□□□□ -0.97
PTPN7-217ENST00000495688 DNAL4O96015 105 aa9.02□□□□□ -0.97
PTPN7-217ENST00000495688 SLPIP03973 132 aa9.02□□□□□ -0.97
PTPN7-217ENST00000495688 Q8N3U1 123 aa9.02□□□□□ -0.97
PTPN7-217ENST00000495688 C3orf56Q8N813 242 aa9.02□□□□□ -0.97
PTPN7-217ENST00000495688 SPATA3Q8NHX4 192 aa9.02□□□□□ -0.97
PTPN7-217ENST00000495688 LECT2O14960 151 aa9.01□□□□□ -0.97
PTPN7-217ENST00000495688 DEFB4AO15263 64 aa9.01□□□□□ -0.97
PTPN7-217ENST00000495688 PRR3P79522 188 aaKnown RBP9.01□□□□□ -0.97
PTPN7-217ENST00000495688 C14orf132Q9NPU4 83 aa9.01□□□□□ -0.97
PTPN7-217ENST00000495688 LINC00643Q86TS7 51 aa9□□□□□ -0.97
PTPN7-217ENST00000495688 X6R8D5 127 aa9□□□□□ -0.97
PTPN7-217ENST00000495688 ATRQ13535 2644 aa9□□□□□ -0.97
PTPN7-217ENST00000495688 SDIM1Q6ZPB5 146 aa8.99□□□□□ -0.97
PTPN7-217ENST00000495688 LINC00482Q8N8I6 264 aa8.99□□□□□ -0.97
PTPN7-217ENST00000495688 KIR2DL5BQ8NHK3 375 aa8.99□□□□□ -0.97
PTPN7-217ENST00000495688 IGLV10-54A0A075B6I4 117 aa8.98□□□□□ -0.97
PTPN7-217ENST00000495688 INAFM2P0DMQ5 153 aa8.98□□□□□ -0.97
PTPN7-217ENST00000495688 HILS1P60008 231 aa8.98□□□□□ -0.97
PTPN7-217ENST00000495688 LINC00612Q8N6U2 182 aa8.98□□□□□ -0.97
PTPN7-217ENST00000495688 HIVEP1P15822 2718 aa8.98□□□□□ -0.97
PTPN7-217ENST00000495688 NCR3O14931 201 aa8.98□□□□□ -0.97
PTPN7-217ENST00000495688 SS18Q15532 418 aa8.98□□□□□ -0.97
PTPN7-217ENST00000495688 LINC00269Q8N2A0 174 aa8.97□□□□□ -0.97
PTPN7-217ENST00000495688 H0YGX0 51 aa8.97□□□□□ -0.97
PTPN7-217ENST00000495688 PRO0255Q9UI72 69 aa8.97□□□□□ -0.97
PTPN7-217ENST00000495688 A0A1B0GUV1 79 aa8.96□□□□□ -0.97
PTPN7-217ENST00000495688 C9orf116Q5BN46 136 aaPredicted RBP8.96□□□□□ -0.97
PTPN7-217ENST00000495688 IMUPQ9GZP8 106 aa8.96□□□□□ -0.97
PTPN7-217ENST00000495688 Q8IZM0 81 aa8.96□□□□□ -0.98
PTPN7-217ENST00000495688 NSD1Q96L73 2696 aaPredicted RBP8.95□□□□□ -0.98
PTPN7-217ENST00000495688 DEFB135Q30KP9 77 aa8.95□□□□□ -0.98
PTPN7-217ENST00000495688 NANOS2P60321 138 aaKnown RBP8.94□□□□□ -0.98
PTPN7-217ENST00000495688 TEP1Q99973 2627 aaKnown RBP8.94□□□□□ -0.98
PTPN7-217ENST00000495688 LY6G6DO95868 133 aa8.94□□□□□ -0.98
PTPN7-217ENST00000495688 PKD1L1Q8TDX9 2849 aa8.94□□□□□ -0.98
PTPN7-217ENST00000495688 KIAA0087Q14695 138 aa8.93□□□□□ -0.98
PTPN7-217ENST00000495688 LINC00846Q9NV44 126 aa8.93□□□□□ -0.98
PTPN7-217ENST00000495688 ANGP03950 147 aaKnown RBP8.92□□□□□ -0.98
PTPN7-217ENST00000495688 Q8NDZ9 215 aa8.92□□□□□ -0.98
PTPN7-217ENST00000495688 CHCHD10Q8WYQ3 142 aaPredicted RBP8.92□□□□□ -0.98
PTPN7-217ENST00000495688 OBSCN-AS1Q96MR7 158 aa8.92□□□□□ -0.98
PTPN7-217ENST00000495688 KLK5Q9Y337 293 aaPredicted RBP8.92□□□□□ -0.98
PTPN7-217ENST00000495688 IGKV3D-7A0A0C4DH55 119 aa8.91□□□□□ -0.98
PTPN7-217ENST00000495688 LINC00526Q96FQ7 95 aa8.91□□□□□ -0.98
PTPN7-217ENST00000495688 CD164L2Q6UWJ8 174 aa8.9□□□□□ -0.98
PTPN7-217ENST00000495688 REG3AQ06141 175 aa8.9□□□□□ -0.98
PTPN7-217ENST00000495688 ORMDL1Q9P0S3 153 aa8.9□□□□□ -0.98
PTPN7-217ENST00000495688 CELA1Q9UNI1 258 aa8.89□□□□□ -0.99
PTPN7-217ENST00000495688 C6orf223Q8N319 242 aa8.89□□□□□ -0.99
PTPN7-217ENST00000495688 SMIM20Q8N5G0 67 aa8.89□□□□□ -0.99
PTPN7-217ENST00000495688 IGHV4-28A0A0C4DH34 117 aa8.88□□□□□ -0.99
PTPN7-217ENST00000495688 CXCL5P42830 114 aa8.88□□□□□ -0.99
PTPN7-217ENST00000495688 SMIM9A6NGZ8 99 aa8.88□□□□□ -0.99
PTPN7-217ENST00000495688 C10orf25Q5T742 122 aa8.88□□□□□ -0.99
PTPN7-217ENST00000495688 A0A087WVE0 104 aa8.87□□□□□ -0.99
PTPN7-217ENST00000495688 Q8N814 137 aa8.87□□□□□ -0.99
PTPN7-217ENST00000495688 LYRM9A8MSI8 78 aa8.87□□□□□ -0.99
PTPN7-217ENST00000495688 HTN3P15516 51 aa8.87□□□□□ -0.99
PTPN7-217ENST00000495688 LINC01561Q8N1V8 128 aa8.87□□□□□ -0.99
PTPN7-217ENST00000495688 DAD1P61803 113 aa8.86□□□□□ -0.99
PTPN7-217ENST00000495688 C6orf99Q4VX62 202 aa8.86□□□□□ -0.99
PTPN7-217ENST00000495688 C9orf153Q5TBE3 101 aa8.86□□□□□ -0.99
PTPN7-217ENST00000495688 UNQ6190/PRO20217Q6UXQ8 127 aa8.86□□□□□ -0.99
PTPN7-217ENST00000495688 C3orf22Q8N5N4 141 aa8.86□□□□□ -0.99
PTPN7-217ENST00000495688 TMEM126AQ9H061 195 aa8.85□□□□□ -0.99
PTPN7-217ENST00000495688 NDUFC2O95298 119 aa8.84□□□□□ -0.99
PTPN7-217ENST00000495688 COX17Q14061 63 aa8.84□□□□□ -0.99
PTPN7-217ENST00000495688 LINC00167Q96N53 147 aa8.84□□□□□ -0.99
PTPN7-217ENST00000495688 HIST1H4AP62805 103 aaKnown RBP8.84□□□□□ -0.99
PTPN7-217ENST00000495688 UQCRQO14949 82 aa8.83□□□□□ -1
PTPN7-217ENST00000495688 ANK2Q01484 3957 aa8.83□□□□□ -1
PTPN7-217ENST00000495688 KMT2BQ9UMN6 2715 aaPredicted RBP8.83□□□□□ -1
PTPN7-217ENST00000495688 CCKP06307 115 aa8.83□□□□□ -1
PTPN7-217ENST00000495688 C2orf48Q96LS8 159 aa8.83□□□□□ -1
PTPN7-217ENST00000495688 C9orf66Q5T8R8 295 aa8.82□□□□□ -1
PTPN7-217ENST00000495688 Q8NAQ8 132 aa8.82□□□□□ -1
PTPN7-217ENST00000495688 S100A7L2Q5SY68 101 aa8.82□□□□□ -1
PTPN7-217ENST00000495688 Q6JHZ5 121 aa8.82□□□□□ -1
PTPN7-217ENST00000495688 KLK12Q9UKR0 248 aa8.82□□□□□ -1
PTPN7-217ENST00000495688 SPAG11BQ08648 103 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms