RNA–Protein interactions for RNA: ENST00000495221.1

PDE1C-211, Transcript of phosphodiesterase 1C, humanhuman

TSL 4

Gene PDE1C, Length 540 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-211ENST00000495221 SEC11AP67812 179 aa13.22□□□□□ -0.29
PDE1C-211ENST00000495221 FABP9Q0Z7S8 132 aa13.22□□□□□ -0.29
PDE1C-211ENST00000495221 TIMM17AQ99595 171 aa13.22□□□□□ -0.29
PDE1C-211ENST00000495221 MRPL18Q9H0U6 180 aaKnown RBP13.22□□□□□ -0.29
PDE1C-211ENST00000495221 TRAPPC1Q9Y5R8 145 aa13.22□□□□□ -0.29
PDE1C-211ENST00000495221 PRSS2P07478 247 aa13.21□□□□□ -0.29
PDE1C-211ENST00000495221 S100A1P23297 94 aa13.21□□□□□ -0.29
PDE1C-211ENST00000495221 Q8IZM0 81 aa13.21□□□□□ -0.29
PDE1C-211ENST00000495221 DIRC1Q969H9 104 aa13.21□□□□□ -0.29
PDE1C-211ENST00000495221 M0QXV9 152 aa13.2□□□□□ -0.3
PDE1C-211ENST00000495221 HERVK_113P63121 156 aa13.2□□□□□ -0.3
PDE1C-211ENST00000495221 ODF1Q14990 250 aa13.2□□□□□ -0.3
PDE1C-211ENST00000495221 KIAA1644Q3SXP7 199 aa13.2□□□□□ -0.3
PDE1C-211ENST00000495221 YPEL4Q96NS1 127 aa13.2□□□□□ -0.3
PDE1C-211ENST00000495221 KRTAP7-1Q8IUC3 87 aa13.19□□□□□ -0.3
PDE1C-211ENST00000495221 TOMM6Q96B49 74 aa13.19□□□□□ -0.3
PDE1C-211ENST00000495221 CKS1BP61024 79 aa13.18□□□□□ -0.3
PDE1C-211ENST00000495221 KRTAP11-1Q8IUC1 163 aa13.18□□□□□ -0.3
PDE1C-211ENST00000495221 TOMM7Q9P0U1 55 aa13.18□□□□□ -0.3
PDE1C-211ENST00000495221 LRP2P98164 4655 aa13.17□□□□□ -0.3
PDE1C-211ENST00000495221 C9orf129Q5T035 196 aaKnown RBP13.17□□□□□ -0.3
PDE1C-211ENST00000495221 ATP6V1G1O75348 118 aa13.16□□□□□ -0.3
PDE1C-211ENST00000495221 UBE2BP63146 152 aa13.16□□□□□ -0.3
PDE1C-211ENST00000495221 C6orf226Q5I0X4 101 aa13.16□□□□□ -0.3
PDE1C-211ENST00000495221 ALKBH7Q9BT30 221 aaPredicted RBP13.16□□□□□ -0.3
PDE1C-211ENST00000495221 GEMIN7Q9H840 131 aaKnown RBP13.16□□□□□ -0.3
PDE1C-211ENST00000495221 LINC01549A6NIU2 74 aa13.15□□□□□ -0.3
PDE1C-211ENST00000495221 H0Y9J4 135 aa13.15□□□□□ -0.3
PDE1C-211ENST00000495221 ERASQ7Z444 233 aa13.15□□□□□ -0.3
PDE1C-211ENST00000495221 CDKN2A-AS1Q9UH64 79 aa13.15□□□□□ -0.3
PDE1C-211ENST00000495221 CXCL5P42830 114 aa13.13□□□□□ -0.31
PDE1C-211ENST00000495221 F8VRH5 84 aa13.12□□□□□ -0.31
PDE1C-211ENST00000495221 SCO1O75880 301 aa13.12□□□□□ -0.31
PDE1C-211ENST00000495221 LINC01546A6NGU7 62 aa13.11□□□□□ -0.31
PDE1C-211ENST00000495221 SCGB3A1Q96QR1 104 aa13.11□□□□□ -0.31
PDE1C-211ENST00000495221 RNF213Q63HN8 5207 aa13.11□□□□□ -0.31
PDE1C-211ENST00000495221 COLCA2A8K830 154 aa13.1□□□□□ -0.31
PDE1C-211ENST00000495221 IGLV5-45A0A087WSX0 123 aa13.08□□□□□ -0.32
PDE1C-211ENST00000495221 TINCRA0A1B0GVN0 87 aa13.08□□□□□ -0.32
PDE1C-211ENST00000495221 LINC00469Q8N7U9 141 aa13.08□□□□□ -0.32
PDE1C-211ENST00000495221 IGLV1-50A0A075B6I6 118 aa13.07□□□□□ -0.32
PDE1C-211ENST00000495221 SMIM1B2RUZ4 78 aa13.07□□□□□ -0.32
PDE1C-211ENST00000495221 PDZD11Q5EBL8 140 aa13.07□□□□□ -0.32
PDE1C-211ENST00000495221 PRR26Q8N8Z3 221 aa13.07□□□□□ -0.32
PDE1C-211ENST00000495221 NUPR1O60356 82 aa13.06□□□□□ -0.32
PDE1C-211ENST00000495221 FA2HQ7L5A8 372 aa13.06□□□□□ -0.32
PDE1C-211ENST00000495221 XAGE1AQ9HD64 81 aa13.06□□□□□ -0.32
PDE1C-211ENST00000495221 TP73-AS1Q9UF72 201 aa13.06□□□□□ -0.32
PDE1C-211ENST00000495221 C22orf24Q9Y442 160 aa13.06□□□□□ -0.32
PDE1C-211ENST00000495221 TRGC2P03986 189 aa13.05□□□□□ -0.32
PDE1C-211ENST00000495221 KRTAP1-4P0C5Y4 121 aa13.05□□□□□ -0.32
PDE1C-211ENST00000495221 LBHQ53QV2 105 aaPredicted RBP13.05□□□□□ -0.32
PDE1C-211ENST00000495221 COX7B2Q8TF08 81 aa13.04□□□□□ -0.32
PDE1C-211ENST00000495221 RAB5BP61020 215 aa13.03□□□□□ -0.32
PDE1C-211ENST00000495221 C18orf32Q8TCD1 76 aa13.03□□□□□ -0.32
PDE1C-211ENST00000495221 CST9LQ9H4G1 147 aa13.03□□□□□ -0.32
PDE1C-211ENST00000495221 ZNF861PO60384 105 aa13.02□□□□□ -0.33
PDE1C-211ENST00000495221 PMVKQ15126 192 aa13.02□□□□□ -0.33
PDE1C-211ENST00000495221 LINC00614P0C842 121 aa13□□□□□ -0.33
PDE1C-211ENST00000495221 RPL13AP40429 203 aaKnown RBP13□□□□□ -0.33
PDE1C-211ENST00000495221 MRPL55Q7Z7F7 128 aaKnown RBP13□□□□□ -0.33
PDE1C-211ENST00000495221 H3BRM9 83 aa12.97□□□□□ -0.33
PDE1C-211ENST00000495221 SPINK8P0C7L1 97 aa12.97□□□□□ -0.33
PDE1C-211ENST00000495221 BAGE3Q86Y29 109 aa12.97□□□□□ -0.33
PDE1C-211ENST00000495221 IGLC3P0DOY3 106 aa12.94□□□□□ -0.34
PDE1C-211ENST00000495221 CHCHD1Q96BP2 118 aaKnown RBP12.94□□□□□ -0.34
PDE1C-211ENST00000495221 IGLV5-37A0A075B6J1 123 aa12.93□□□□□ -0.34
PDE1C-211ENST00000495221 BCE1O60756 84 aa12.93□□□□□ -0.34
PDE1C-211ENST00000495221 RPL28P46779 137 aaKnown RBP12.93□□□□□ -0.34
PDE1C-211ENST00000495221 A0A096LNJ9 63 aa12.92□□□□□ -0.34
PDE1C-211ENST00000495221 ATP5LO75964 103 aa12.92□□□□□ -0.34
PDE1C-211ENST00000495221 URB1-AS1Q96HZ7 61 aa12.92□□□□□ -0.34
PDE1C-211ENST00000495221 LINC00167Q96N53 147 aa12.92□□□□□ -0.34
PDE1C-211ENST00000495221 IGLV5-39A0A0G2JS06 123 aa12.91□□□□□ -0.34
PDE1C-211ENST00000495221 HBDP02042 147 aa12.91□□□□□ -0.34
PDE1C-211ENST00000495221 LPAP08519 4548 aa12.89□□□□□ -0.35
PDE1C-211ENST00000495221 HSBP1O75506 76 aa12.89□□□□□ -0.35
PDE1C-211ENST00000495221 NKAPP1Q8N9T2 125 aa12.89□□□□□ -0.35
PDE1C-211ENST00000495221 ZNF22P17026 224 aaPredicted RBP12.88□□□□□ -0.35
PDE1C-211ENST00000495221 RPL37AP8A6NKH3 93 aa12.87□□□□□ -0.35
PDE1C-211ENST00000495221 NDUFA6P56556 154 aa12.87□□□□□ -0.35
PDE1C-211ENST00000495221 PMCHL1Q16048 86 aa12.87□□□□□ -0.35
PDE1C-211ENST00000495221 HIST1H2BKO60814 126 aa12.85□□□□□ -0.35
PDE1C-211ENST00000495221 SERF1AO75920 110 aa12.85□□□□□ -0.35
PDE1C-211ENST00000495221 HIST1H2BJP06899 126 aa12.85□□□□□ -0.35
PDE1C-211ENST00000495221 HIST1H2BOP23527 126 aa12.85□□□□□ -0.35
PDE1C-211ENST00000495221 HIST1H2BBP33778 126 aa12.85□□□□□ -0.35
PDE1C-211ENST00000495221 HIST1H2BDP58876 126 aa12.85□□□□□ -0.35
PDE1C-211ENST00000495221 HIST1H2BCP62807 126 aa12.85□□□□□ -0.35
PDE1C-211ENST00000495221 HIST2H2BEQ16778 126 aa12.85□□□□□ -0.35
PDE1C-211ENST00000495221 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.85□□□□□ -0.35
PDE1C-211ENST00000495221 HIST1H2BHQ93079 126 aa12.85□□□□□ -0.35
PDE1C-211ENST00000495221 HIST1H2BNQ99877 126 aa12.85□□□□□ -0.35
PDE1C-211ENST00000495221 HIST1H2BMQ99879 126 aa12.85□□□□□ -0.35
PDE1C-211ENST00000495221 GAGE10A6NGK3 116 aa12.84□□□□□ -0.35
PDE1C-211ENST00000495221 COX17Q14061 63 aa12.84□□□□□ -0.35
PDE1C-211ENST00000495221 SFTA2Q6UW10 78 aa12.84□□□□□ -0.35
PDE1C-211ENST00000495221 PFN2P35080 140 aa12.83□□□□□ -0.36
PDE1C-211ENST00000495221 KRTAP13-1Q8IUC0 172 aa12.83□□□□□ -0.36
PDE1C-211ENST00000495221 ERG28Q9UKR5 140 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms