RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 ORMDL2Q53FV1 153 aa7.01□□□□□ -1.29
VTI1A-208ENST00000494728 Q6ZN92 141 aa7.01□□□□□ -1.29
VTI1A-208ENST00000494728 LINC01561Q8N1V8 128 aa7.01□□□□□ -1.29
VTI1A-208ENST00000494728 DIRC1Q969H9 104 aa7.01□□□□□ -1.29
VTI1A-208ENST00000494728 CTDSP1Q9GZU7 261 aa7.01□□□□□ -1.29
VTI1A-208ENST00000494728 CDKN2A-AS1Q9UH64 79 aa7.01□□□□□ -1.29
VTI1A-208ENST00000494728 PACRGQ96M98 296 aaPredicted RBP7□□□□□ -1.29
VTI1A-208ENST00000494728 VCX2Q9H322 139 aa7□□□□□ -1.29
VTI1A-208ENST00000494728 XAGE1AQ9HD64 81 aa7□□□□□ -1.29
VTI1A-208ENST00000494728 CARHSP1Q9Y2V2 147 aaKnown RBP7□□□□□ -1.29
VTI1A-208ENST00000494728 S100PP25815 95 aa6.99□□□□□ -1.29
VTI1A-208ENST00000494728 UBE2BP63146 152 aa6.99□□□□□ -1.29
VTI1A-208ENST00000494728 C10orf91Q5T1B1 145 aa6.99□□□□□ -1.29
VTI1A-208ENST00000494728 Q8IZM0 81 aa6.99□□□□□ -1.29
VTI1A-208ENST00000494728 TOMM6Q96B49 74 aa6.99□□□□□ -1.29
VTI1A-208ENST00000494728 NXT2Q9NPJ8 142 aaKnown RBP6.99□□□□□ -1.29
VTI1A-208ENST00000494728 RPS10P5Q9NQ39 176 aa6.99□□□□□ -1.29
VTI1A-208ENST00000494728 K7EMI3 77 aa6.98□□□□□ -1.29
VTI1A-208ENST00000494728 APOC3P02656 99 aa6.98□□□□□ -1.29
VTI1A-208ENST00000494728 NPSP0C0P6 89 aa6.98□□□□□ -1.29
VTI1A-208ENST00000494728 RHEBQ15382 184 aa6.98□□□□□ -1.29
VTI1A-208ENST00000494728 TIMM17AQ99595 171 aa6.98□□□□□ -1.29
VTI1A-208ENST00000494728 SMIM1B2RUZ4 78 aa6.97□□□□□ -1.29
VTI1A-208ENST00000494728 PRSS2P07478 247 aa6.97□□□□□ -1.29
VTI1A-208ENST00000494728 NDUFA5Q16718 116 aa6.97□□□□□ -1.29
VTI1A-208ENST00000494728 ALKBH7Q9BT30 221 aaPredicted RBP6.97□□□□□ -1.29
VTI1A-208ENST00000494728 KRTAP4-8Q9BYQ9 185 aa6.97□□□□□ -1.29
VTI1A-208ENST00000494728 MUC2Q02817 5179 aa6.97□□□□□ -1.29
VTI1A-208ENST00000494728 TRAV9-1A0A075B6T8 112 aa6.96□□□□□ -1.3
VTI1A-208ENST00000494728 CKS1BP61024 79 aa6.96□□□□□ -1.3
VTI1A-208ENST00000494728 HERVK_113P63121 156 aa6.96□□□□□ -1.3
VTI1A-208ENST00000494728 C6orf226Q5I0X4 101 aa6.96□□□□□ -1.3
VTI1A-208ENST00000494728 C22orf24Q9Y442 160 aa6.96□□□□□ -1.3
VTI1A-208ENST00000494728 F8VRH5 84 aa6.95□□□□□ -1.3
VTI1A-208ENST00000494728 ERASQ7Z444 233 aa6.95□□□□□ -1.3
VTI1A-208ENST00000494728 GEMIN7Q9H840 131 aaKnown RBP6.95□□□□□ -1.3
VTI1A-208ENST00000494728 IGLV1-50A0A075B6I6 118 aa6.94□□□□□ -1.3
VTI1A-208ENST00000494728 IGLV5-45A0A087WSX0 123 aa6.94□□□□□ -1.3
VTI1A-208ENST00000494728 LINC01546A6NGU7 62 aa6.94□□□□□ -1.3
VTI1A-208ENST00000494728 SNAPINO95295 136 aa6.94□□□□□ -1.3
VTI1A-208ENST00000494728 SVBPQ8N300 66 aa6.94□□□□□ -1.3
VTI1A-208ENST00000494728 SCGB3A1Q96QR1 104 aa6.94□□□□□ -1.3
VTI1A-208ENST00000494728 SPINK8P0C7L1 97 aa6.93□□□□□ -1.3
VTI1A-208ENST00000494728 A0A096LNJ9 63 aa6.92□□□□□ -1.3
VTI1A-208ENST00000494728 TINCRA0A1B0GVN0 87 aa6.92□□□□□ -1.3
VTI1A-208ENST00000494728 ZNF861PO60384 105 aa6.92□□□□□ -1.3
VTI1A-208ENST00000494728 SEC11AP67812 179 aa6.92□□□□□ -1.3
VTI1A-208ENST00000494728 COX7B2Q8TF08 81 aa6.92□□□□□ -1.3
VTI1A-208ENST00000494728 GNB1LQ9BYB4 327 aa6.92□□□□□ -1.3
VTI1A-208ENST00000494728 CST9LQ9H4G1 147 aa6.92□□□□□ -1.3
VTI1A-208ENST00000494728 A0A087X002 238 aa6.91□□□□□ -1.3
VTI1A-208ENST00000494728 PDZD11Q5EBL8 140 aa6.91□□□□□ -1.3
VTI1A-208ENST00000494728 PAPPA-AS1Q5QFB9 102 aa6.91□□□□□ -1.3
VTI1A-208ENST00000494728 MRPL55Q7Z7F7 128 aaKnown RBP6.91□□□□□ -1.3
VTI1A-208ENST00000494728 SLC7A5P1Q8MH63 180 aa6.91□□□□□ -1.3
VTI1A-208ENST00000494728 URB1-AS1Q96HZ7 61 aa6.91□□□□□ -1.3
VTI1A-208ENST00000494728 MRPL18Q9H0U6 180 aaKnown RBP6.91□□□□□ -1.3
VTI1A-208ENST00000494728 SCO1O75880 301 aa6.9□□□□□ -1.3
VTI1A-208ENST00000494728 CXCL5P42830 114 aa6.9□□□□□ -1.3
VTI1A-208ENST00000494728 FABP9Q0Z7S8 132 aa6.9□□□□□ -1.3
VTI1A-208ENST00000494728 COX19Q49B96 90 aa6.9□□□□□ -1.3
VTI1A-208ENST00000494728 TP73-AS1Q9UF72 201 aa6.9□□□□□ -1.3
VTI1A-208ENST00000494728 GAGE10A6NGK3 116 aa6.89□□□□□ -1.31
VTI1A-208ENST00000494728 RPL37AP8A6NKH3 93 aa6.89□□□□□ -1.31
VTI1A-208ENST00000494728 NUPR1O60356 82 aa6.89□□□□□ -1.31
VTI1A-208ENST00000494728 G0S2P27469 103 aa6.89□□□□□ -1.31
VTI1A-208ENST00000494728 RAB5BP61020 215 aa6.89□□□□□ -1.31
VTI1A-208ENST00000494728 LINC00167Q96N53 147 aa6.89□□□□□ -1.31
VTI1A-208ENST00000494728 BCE1O60756 84 aa6.88□□□□□ -1.31
VTI1A-208ENST00000494728 PMVKQ15126 192 aa6.88□□□□□ -1.31
VTI1A-208ENST00000494728 LBHQ53QV2 105 aaPredicted RBP6.88□□□□□ -1.31
VTI1A-208ENST00000494728 KRTAP13-1Q8IUC0 172 aa6.88□□□□□ -1.31
VTI1A-208ENST00000494728 TRAPPC1Q9Y5R8 145 aa6.88□□□□□ -1.31
VTI1A-208ENST00000494728 IGLV5-37A0A075B6J1 123 aa6.87□□□□□ -1.31
VTI1A-208ENST00000494728 IGLV5-39A0A0G2JS06 123 aa6.87□□□□□ -1.31
VTI1A-208ENST00000494728 RPL13AP40429 203 aaKnown RBP6.87□□□□□ -1.31
VTI1A-208ENST00000494728 FA2HQ7L5A8 372 aa6.87□□□□□ -1.31
VTI1A-208ENST00000494728 ANAPC11Q9NYG5 84 aa6.87□□□□□ -1.31
VTI1A-208ENST00000494728 IGLC3P0DOY3 106 aa6.86□□□□□ -1.31
VTI1A-208ENST00000494728 ZNF22P17026 224 aaPredicted RBP6.86□□□□□ -1.31
VTI1A-208ENST00000494728 PMCHL1Q16048 86 aa6.86□□□□□ -1.31
VTI1A-208ENST00000494728 CBLN2Q8IUK8 224 aa6.86□□□□□ -1.31
VTI1A-208ENST00000494728 Q8NDZ9 215 aa6.86□□□□□ -1.31
VTI1A-208ENST00000494728 SMCO4Q9NRQ5 59 aa6.86□□□□□ -1.31
VTI1A-208ENST00000494728 PRR4Q16378 134 aa6.85□□□□□ -1.31
VTI1A-208ENST00000494728 C18orf32Q8TCD1 76 aa6.85□□□□□ -1.31
VTI1A-208ENST00000494728 IGKV2-28A0A075B6P5 120 aa6.84□□□□□ -1.31
VTI1A-208ENST00000494728 TSPAN13O95857 204 aa6.84□□□□□ -1.31
VTI1A-208ENST00000494728 IGKV2D-28P01615 120 aa6.84□□□□□ -1.31
VTI1A-208ENST00000494728 RPL28P46779 137 aaKnown RBP6.84□□□□□ -1.31
VTI1A-208ENST00000494728 KRTAP13-2Q52LG2 175 aa6.84□□□□□ -1.31
VTI1A-208ENST00000494728 LINC01549A6NIU2 74 aa6.83□□□□□ -1.32
VTI1A-208ENST00000494728 C11orf86A6NJI1 115 aa6.83□□□□□ -1.32
VTI1A-208ENST00000494728 PFN2P35080 140 aa6.83□□□□□ -1.32
VTI1A-208ENST00000494728 YPEL4Q96NS1 127 aa6.83□□□□□ -1.32
VTI1A-208ENST00000494728 H3BRM9 83 aa6.82□□□□□ -1.32
VTI1A-208ENST00000494728 ATP5LO75964 103 aa6.82□□□□□ -1.32
VTI1A-208ENST00000494728 VPREB1P12018 145 aa6.82□□□□□ -1.32
VTI1A-208ENST00000494728 NDUFA6P56556 154 aa6.82□□□□□ -1.32
VTI1A-208ENST00000494728 PRLHP81277 87 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms