RNA–Protein interactions for RNA: ENST00000494046.5

ABCA2-222, Transcript of ATP binding cassette subfamily A member 2, human

TSL 5

Gene ABCA2, Length 1,622 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-222	ENST00000494046	SRSF9	Q13242	221 aa	Known RBP eCLIP	12.54	□□□□□ -0.4
ABCA2-222	ENST00000494046	FAM19A3	Q7Z5A8	133 aa		12.54	□□□□□ -0.4
ABCA2-222	ENST00000494046	OR5A1	Q8NGJ0	315 aa		12.54	□□□□□ -0.4
ABCA2-222	ENST00000494046	IGHV3-64	A0A075B6Q5	118 aa		12.53	□□□□□ -0.4
ABCA2-222	ENST00000494046	IGHV1-58	A0A0C4DH39	117 aa		12.53	□□□□□ -0.4
ABCA2-222	ENST00000494046	LRCOL1	A6NCL2	159 aa		12.53	□□□□□ -0.4
ABCA2-222	ENST00000494046		H3BUT2	72 aa		12.53	□□□□□ -0.4
ABCA2-222	ENST00000494046	TMEM101	Q96IK0	257 aa		12.53	□□□□□ -0.4
ABCA2-222	ENST00000494046	IGLV5-45	A0A087WSX0	123 aa		12.52	□□□□□ -0.4
ABCA2-222	ENST00000494046	CDC42SE2	Q9NRR3	84 aa		12.52	□□□□□ -0.4
ABCA2-222	ENST00000494046	TMEM238L	A0A1B0GVL6	79 aa		12.51	□□□□□ -0.41
ABCA2-222	ENST00000494046		A6NJY4	79 aa		12.51	□□□□□ -0.41
ABCA2-222	ENST00000494046		A0A1B0GWB2	263 aa		12.51	□□□□□ -0.41
ABCA2-222	ENST00000494046	XG	P55808	180 aa		12.51	□□□□□ -0.41
ABCA2-222	ENST00000494046	HERVK_113	P63121	156 aa		12.51	□□□□□ -0.41
ABCA2-222	ENST00000494046	FAT1	Q14517	4588 aa		12.5	□□□□□ -0.41
ABCA2-222	ENST00000494046	TRBV6-8	A0A0A6YYG3	113 aa		12.5	□□□□□ -0.41
ABCA2-222	ENST00000494046		K7ERJ3	54 aa		12.5	□□□□□ -0.41
ABCA2-222	ENST00000494046	TRAV8-3	A0A0A6YYJ7	113 aa		12.49	□□□□□ -0.41
ABCA2-222	ENST00000494046	SPINK8	P0C7L1	97 aa		12.49	□□□□□ -0.41
ABCA2-222	ENST00000494046	IGLV5-52	A0A0A0MRZ9	124 aa		12.48	□□□□□ -0.41
ABCA2-222	ENST00000494046		A0A1W2PPM0	123 aa		12.48	□□□□□ -0.41
ABCA2-222	ENST00000494046	LINC00242	Q5T6M2	205 aa		12.48	□□□□□ -0.41
ABCA2-222	ENST00000494046	NAA38	Q9BRA0	125 aa	Known RBP	12.48	□□□□□ -0.41
ABCA2-222	ENST00000494046	CDKN2A-AS1	Q9UH64	79 aa		12.48	□□□□□ -0.41
ABCA2-222	ENST00000494046	GAGE10	A6NGK3	116 aa		12.48	□□□□□ -0.41
ABCA2-222	ENST00000494046	GTF2H5	Q6ZYL4	71 aa		12.48	□□□□□ -0.41
ABCA2-222	ENST00000494046		Q8N814	137 aa		12.48	□□□□□ -0.41
ABCA2-222	ENST00000494046	HAMP	P81172	84 aa		12.47	□□□□□ -0.41
ABCA2-222	ENST00000494046	COX6A2	Q02221	97 aa		12.47	□□□□□ -0.41
ABCA2-222	ENST00000494046	GAGE6	Q13070	117 aa		12.47	□□□□□ -0.41
ABCA2-222	ENST00000494046	WFDC2	Q14508	124 aa		12.47	□□□□□ -0.41
ABCA2-222	ENST00000494046	TRAV13-1	A0A0B4J241	112 aa		12.46	□□□□□ -0.41
ABCA2-222	ENST00000494046		A0A0J9YXY3	114 aa		12.46	□□□□□ -0.41
ABCA2-222	ENST00000494046	TMEM238	C9JI98	176 aa		12.46	□□□□□ -0.41
ABCA2-222	ENST00000494046	FABP2	P12104	132 aa		12.46	□□□□□ -0.41
ABCA2-222	ENST00000494046	NDUFA12	Q9UI09	145 aa		12.46	□□□□□ -0.41
ABCA2-222	ENST00000494046		K7EP34	96 aa		12.45	□□□□□ -0.42
ABCA2-222	ENST00000494046	LECT2	O14960	151 aa		12.45	□□□□□ -0.42
ABCA2-222	ENST00000494046	CHCHD5	Q9BSY4	110 aa		12.45	□□□□□ -0.42
ABCA2-222	ENST00000494046	EPM2A	B3EWF7	344 aa		12.44	□□□□□ -0.42
ABCA2-222	ENST00000494046	NTN5	Q8WTR8	489 aa	Predicted RBP	12.44	□□□□□ -0.42
ABCA2-222	ENST00000494046	KLK12	Q9UKR0	248 aa		12.44	□□□□□ -0.42
ABCA2-222	ENST00000494046	IGLV5-39	A0A0G2JS06	123 aa		12.43	□□□□□ -0.42
ABCA2-222	ENST00000494046	SPCS1	Q9Y6A9	102 aa		12.43	□□□□□ -0.42
ABCA2-222	ENST00000494046	SMR3B	P02814	79 aa	Predicted RBP	12.42	□□□□□ -0.42
ABCA2-222	ENST00000494046	DNAH8	Q96JB1	4490 aa		12.42	□□□□□ -0.42
ABCA2-222	ENST00000494046	UBE2W	Q96B02	151 aa		12.4	□□□□□ -0.42
ABCA2-222	ENST00000494046	IGLV4-60	A0A075B6I1	120 aa		12.4	□□□□□ -0.42
ABCA2-222	ENST00000494046	IGKV2D-24	A0A075B6R9	120 aa		12.4	□□□□□ -0.42
ABCA2-222	ENST00000494046	SMIM1	B2RUZ4	78 aa		12.4	□□□□□ -0.42
ABCA2-222	ENST00000494046	TMEM262	E9PQX1	116 aa		12.4	□□□□□ -0.42
ABCA2-222	ENST00000494046	NDUFA1	O15239	70 aa		12.4	□□□□□ -0.42
ABCA2-222	ENST00000494046	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	12.39	□□□□□ -0.43
ABCA2-222	ENST00000494046	TIMM17B	O60830	172 aa		12.39	□□□□□ -0.43
ABCA2-222	ENST00000494046	RPL24	P83731	157 aa	Known RBP	12.39	□□□□□ -0.43
ABCA2-222	ENST00000494046		Q5VSD8	79 aa		12.39	□□□□□ -0.43
ABCA2-222	ENST00000494046	LITAF	Q99732	161 aa		12.39	□□□□□ -0.43
ABCA2-222	ENST00000494046	SPANXD	Q9BXN6	97 aa		12.39	□□□□□ -0.43
ABCA2-222	ENST00000494046	SPANXC	Q9NY87	97 aa		12.39	□□□□□ -0.43
ABCA2-222	ENST00000494046	APOM	O95445	188 aa		12.38	□□□□□ -0.43
ABCA2-222	ENST00000494046	MUSTN1	Q8IVN3	82 aa		12.38	□□□□□ -0.43
ABCA2-222	ENST00000494046	FAM30A	Q9NZY2	134 aa		12.38	□□□□□ -0.43
ABCA2-222	ENST00000494046		A0A1B0GUV1	79 aa		12.37	□□□□□ -0.43
ABCA2-222	ENST00000494046	CFC1B	P0CG36	223 aa		12.37	□□□□□ -0.43
ABCA2-222	ENST00000494046	CFC1	P0CG37	223 aa		12.37	□□□□□ -0.43
ABCA2-222	ENST00000494046	RMI2	Q96E14	147 aa		12.37	□□□□□ -0.43
ABCA2-222	ENST00000494046		A4D1N5	150 aa		12.36	□□□□□ -0.43
ABCA2-222	ENST00000494046	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	12.35	□□□□□ -0.43
ABCA2-222	ENST00000494046	VPS13B	Q7Z7G8	4022 aa		12.35	□□□□□ -0.43
ABCA2-222	ENST00000494046	IGKV3OR2-268	A0A0C4DH90	116 aa		12.34	□□□□□ -0.43
ABCA2-222	ENST00000494046	RBX1	P62877	108 aa		12.34	□□□□□ -0.43
ABCA2-222	ENST00000494046	MIA	Q16674	131 aa		12.34	□□□□□ -0.43
ABCA2-222	ENST00000494046	LINC01620	Q4KN68	170 aa		12.34	□□□□□ -0.43
ABCA2-222	ENST00000494046	TSPAN13	O95857	204 aa		12.33	□□□□□ -0.43
ABCA2-222	ENST00000494046	INAFM2	P0DMQ5	153 aa		12.33	□□□□□ -0.43
ABCA2-222	ENST00000494046	CIRBP	Q14011	172 aa	Known RBP	12.33	□□□□□ -0.43
ABCA2-222	ENST00000494046	PRO1854	Q9UHT4	67 aa		12.33	□□□□□ -0.43
ABCA2-222	ENST00000494046		A0A0B4J2C4	111 aa		12.33	□□□□□ -0.44
ABCA2-222	ENST00000494046	ADAMTSL4-AS1	Q5T5F5	129 aa		12.33	□□□□□ -0.44
ABCA2-222	ENST00000494046	ENHO	Q6UWT2	76 aa		12.33	□□□□□ -0.44
ABCA2-222	ENST00000494046	LINC00959	A0A1B0GUT2	108 aa		12.32	□□□□□ -0.44
ABCA2-222	ENST00000494046	ANG	P03950	147 aa	Known RBP	12.32	□□□□□ -0.44
ABCA2-222	ENST00000494046	PRSS2	P07478	247 aa		12.32	□□□□□ -0.44
ABCA2-222	ENST00000494046	IFITM1	P13164	125 aa		12.32	□□□□□ -0.44
ABCA2-222	ENST00000494046	CRP	P02741	224 aa		12.31	□□□□□ -0.44
ABCA2-222	ENST00000494046	HERV-K104	P63124	156 aa		12.31	□□□□□ -0.44
ABCA2-222	ENST00000494046	IGHV3OR16-9	A0A0B4J2B5	98 aa		12.3	□□□□□ -0.44
ABCA2-222	ENST00000494046	ZNF625	Q96I27	306 aa	Predicted RBP	12.3	□□□□□ -0.44
ABCA2-222	ENST00000494046	C1orf43	Q9BWL3	253 aa		12.3	□□□□□ -0.44
ABCA2-222	ENST00000494046	SS18	Q15532	418 aa		12.29	□□□□□ -0.44
ABCA2-222	ENST00000494046	LYRM7	Q5U5X0	104 aa		12.29	□□□□□ -0.44
ABCA2-222	ENST00000494046	SRRM2	Q9UQ35	2752 aa	Known RBP	12.29	□□□□□ -0.44
ABCA2-222	ENST00000494046	FAM229A	H3BQW9	127 aa		12.29	□□□□□ -0.44
ABCA2-222	ENST00000494046	CLPSL2	Q6UWE3	100 aa		12.29	□□□□□ -0.44
ABCA2-222	ENST00000494046	COX7B2	Q8TF08	81 aa		12.29	□□□□□ -0.44
ABCA2-222	ENST00000494046		A0A087WZ39	114 aa		12.28	□□□□□ -0.44
ABCA2-222	ENST00000494046	EIF4EBP3	O60516	100 aa	Predicted RBP	12.28	□□□□□ -0.44
ABCA2-222	ENST00000494046		Q6ZSA8	131 aa		12.26	□□□□□ -0.45
ABCA2-222	ENST00000494046	COPS9	Q8WXC6	57 aa		12.26	□□□□□ -0.45

Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms