RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 XGP55808 180 aa4.17□□□□□ -1.74
CPSF7-213ENST00000494016 MUSTN1Q8IVN3 82 aa4.17□□□□□ -1.74
CPSF7-213ENST00000494016 TMEM101Q96IK0 257 aa4.17□□□□□ -1.74
CPSF7-213ENST00000494016 LITAFQ99732 161 aa4.17□□□□□ -1.74
CPSF7-213ENST00000494016 TMEM243Q9BU79 118 aa4.17□□□□□ -1.74
CPSF7-213ENST00000494016 TRBV6-8A0A0A6YYG3 113 aa4.16□□□□□ -1.74
CPSF7-213ENST00000494016 FABP2P12104 132 aa4.16□□□□□ -1.74
CPSF7-213ENST00000494016 GAGE6Q13070 117 aa4.16□□□□□ -1.74
CPSF7-213ENST00000494016 ADAMTSL4-AS1Q5T5F5 129 aa4.16□□□□□ -1.74
CPSF7-213ENST00000494016 FAM222AQ5U5X8 452 aa4.16□□□□□ -1.74
CPSF7-213ENST00000494016 GTF2H5Q6ZYL4 71 aa4.16□□□□□ -1.74
CPSF7-213ENST00000494016 MTURNQ8N3F0 131 aa4.16□□□□□ -1.74
CPSF7-213ENST00000494016 SPCS1Q9Y6A9 102 aa4.16□□□□□ -1.74
CPSF7-213ENST00000494016 NOTCH3Q9UM47 2321 aa4.15□□□□□ -1.74
CPSF7-213ENST00000494016 IGLV4-60A0A075B6I1 120 aa4.15□□□□□ -1.75
CPSF7-213ENST00000494016 IGHV4-28A0A0C4DH34 117 aa4.15□□□□□ -1.75
CPSF7-213ENST00000494016 A0A1B0GV72 72 aa4.15□□□□□ -1.75
CPSF7-213ENST00000494016 LYRM9A8MSI8 78 aa4.15□□□□□ -1.75
CPSF7-213ENST00000494016 KRTAP29-1A8MX34 341 aaPredicted RBP4.15□□□□□ -1.75
CPSF7-213ENST00000494016 F5H768 121 aa4.15□□□□□ -1.75
CPSF7-213ENST00000494016 DEFB4AO15263 64 aa4.15□□□□□ -1.75
CPSF7-213ENST00000494016 APOC4P55056 127 aa4.15□□□□□ -1.75
CPSF7-213ENST00000494016 HERVK_113P63121 156 aa4.15□□□□□ -1.75
CPSF7-213ENST00000494016 SMAGPQ0VAQ4 97 aa4.15□□□□□ -1.75
CPSF7-213ENST00000494016 DEFB135Q30KP9 77 aa4.15□□□□□ -1.75
CPSF7-213ENST00000494016 ZFAND6Q6FIF0 208 aa4.15□□□□□ -1.75
CPSF7-213ENST00000494016 Q8NAQ8 132 aa4.15□□□□□ -1.75
CPSF7-213ENST00000494016 NDUFA12Q9UI09 145 aa4.15□□□□□ -1.75
CPSF7-213ENST00000494016 TRAV13-1A0A0B4J241 112 aa4.14□□□□□ -1.75
CPSF7-213ENST00000494016 SMIM1B2RUZ4 78 aa4.14□□□□□ -1.75
CPSF7-213ENST00000494016 UBE2L6O14933 153 aa4.14□□□□□ -1.75
CPSF7-213ENST00000494016 NDUFA1O15239 70 aa4.14□□□□□ -1.75
CPSF7-213ENST00000494016 TIMM17BO60830 172 aa4.14□□□□□ -1.75
CPSF7-213ENST00000494016 APOMO95445 188 aa4.14□□□□□ -1.75
CPSF7-213ENST00000494016 IGHV4-30-4P0DP06 118 aa4.14□□□□□ -1.75
CPSF7-213ENST00000494016 ATP6V0E2Q8NHE4 81 aa4.14□□□□□ -1.75
CPSF7-213ENST00000494016 SPANXDQ9BXN6 97 aa4.14□□□□□ -1.75
CPSF7-213ENST00000494016 SPANXCQ9NY87 97 aa4.14□□□□□ -1.75
CPSF7-213ENST00000494016 PRO0255Q9UI72 69 aa4.14□□□□□ -1.75
CPSF7-213ENST00000494016 A0A087WZ39 114 aa4.13□□□□□ -1.75
CPSF7-213ENST00000494016 MIFP14174 115 aa4.13□□□□□ -1.75
CPSF7-213ENST00000494016 PRO1854Q9UHT4 67 aa4.13□□□□□ -1.75
CPSF7-213ENST00000494016 PRO0461Q9UI25 63 aa4.13□□□□□ -1.75
CPSF7-213ENST00000494016 CELA1Q9UNI1 258 aa4.13□□□□□ -1.75
CPSF7-213ENST00000494016 IGHV3OR16-9A0A0B4J2B5 98 aa4.12□□□□□ -1.75
CPSF7-213ENST00000494016 A0A1B0GUV1 79 aa4.12□□□□□ -1.75
CPSF7-213ENST00000494016 H3BMG7 143 aa4.12□□□□□ -1.75
CPSF7-213ENST00000494016 IGHV3-33P01772 117 aa4.12□□□□□ -1.75
CPSF7-213ENST00000494016 RBX1P62877 108 aa4.12□□□□□ -1.75
CPSF7-213ENST00000494016 RPL24P83731 157 aaKnown RBP4.12□□□□□ -1.75
CPSF7-213ENST00000494016 WFDC2Q14508 124 aa4.12□□□□□ -1.75
CPSF7-213ENST00000494016 MIAQ16674 131 aa4.12□□□□□ -1.75
CPSF7-213ENST00000494016 OCIAD2Q56VL3 154 aa4.12□□□□□ -1.75
CPSF7-213ENST00000494016 Q6ZVQ6 151 aa4.12□□□□□ -1.75
CPSF7-213ENST00000494016 ZNF625Q96I27 306 aaPredicted RBP4.12□□□□□ -1.75
CPSF7-213ENST00000494016 CHCHD5Q9BSY4 110 aa4.12□□□□□ -1.75
CPSF7-213ENST00000494016 A0A096LPF7 62 aa4.11□□□□□ -1.75
CPSF7-213ENST00000494016 A0A0B4J2C4 111 aa4.11□□□□□ -1.75
CPSF7-213ENST00000494016 LINC00959A0A1B0GUT2 108 aa4.11□□□□□ -1.75
CPSF7-213ENST00000494016 F8W1H4 67 aa4.11□□□□□ -1.75
CPSF7-213ENST00000494016 PRSS2P07478 247 aa4.11□□□□□ -1.75
CPSF7-213ENST00000494016 SPART-AS1P0CW21 52 aa4.11□□□□□ -1.75
CPSF7-213ENST00000494016 IFITM1P13164 125 aa4.11□□□□□ -1.75
CPSF7-213ENST00000494016 DAD1P61803 113 aa4.11□□□□□ -1.75
CPSF7-213ENST00000494016 EGFEM1PQ0D2K5 195 aa4.11□□□□□ -1.75
CPSF7-213ENST00000494016 TENM3Q9P273 2699 aa4.1□□□□□ -1.75
CPSF7-213ENST00000494016 DNAH9Q9NYC9 4486 aa4.1□□□□□ -1.75
CPSF7-213ENST00000494016 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.1□□□□□ -1.75
CPSF7-213ENST00000494016 IGKV3OR2-268A0A0C4DH90 116 aa4.1□□□□□ -1.75
CPSF7-213ENST00000494016 TMEM262E9PQX1 116 aa4.1□□□□□ -1.75
CPSF7-213ENST00000494016 PRB2P02812 416 aaPredicted RBP4.1□□□□□ -1.75
CPSF7-213ENST00000494016 ATP5G1P05496 136 aa4.1□□□□□ -1.75
CPSF7-213ENST00000494016 PSMB2P49721 201 aa4.1□□□□□ -1.75
CPSF7-213ENST00000494016 NPC2P61916 151 aa4.1□□□□□ -1.75
CPSF7-213ENST00000494016 LCE1AQ5T7P2 110 aa4.1□□□□□ -1.75
CPSF7-213ENST00000494016 SFTA2Q6UW10 78 aa4.1□□□□□ -1.75
CPSF7-213ENST00000494016 SOSTDC1Q6X4U4 206 aa4.1□□□□□ -1.75
CPSF7-213ENST00000494016 DAND5Q8N907 189 aa4.1□□□□□ -1.75
CPSF7-213ENST00000494016 Q9HAA7 133 aa4.1□□□□□ -1.75
CPSF7-213ENST00000494016 ERG28Q9UKR5 140 aa4.1□□□□□ -1.75
CPSF7-213ENST00000494016 LOC107984156A0A0G2JMH3 177 aa4.09□□□□□ -1.75
CPSF7-213ENST00000494016 TCL1BO95988 128 aa4.09□□□□□ -1.75
CPSF7-213ENST00000494016 CIRBPQ14011 172 aaKnown RBP4.09□□□□□ -1.75
CPSF7-213ENST00000494016 C5orf38Q86SI9 138 aa4.09□□□□□ -1.75
CPSF7-213ENST00000494016 ARL17AQ8IVW1 177 aa4.09□□□□□ -1.75
CPSF7-213ENST00000494016 LINC00308Q8TCZ7 52 aa4.09□□□□□ -1.75
CPSF7-213ENST00000494016 COX7B2Q8TF08 81 aa4.09□□□□□ -1.75
CPSF7-213ENST00000494016 COL7A1Q02388 2944 aa4.08□□□□□ -1.76
CPSF7-213ENST00000494016 TRBV30A0A0K0K1B3 111 aa4.08□□□□□ -1.76
CPSF7-213ENST00000494016 EPPK1P58107 5090 aaKnown RBP4.08□□□□□ -1.76
CPSF7-213ENST00000494016 CD164Q04900 197 aa4.08□□□□□ -1.76
CPSF7-213ENST00000494016 SS18Q15532 418 aa4.08□□□□□ -1.76
CPSF7-213ENST00000494016 SH2D6Q7Z4S9 175 aa4.08□□□□□ -1.76
CPSF7-213ENST00000494016 PPDPFQ9H3Y8 114 aa4.08□□□□□ -1.76
CPSF7-213ENST00000494016 BIRC6Q9NR09 4857 aa4.08□□□□□ -1.76
CPSF7-213ENST00000494016 TRBV20-1A0A075B6N2 111 aa4.07□□□□□ -1.76
CPSF7-213ENST00000494016 TEX48A0A1B0GUV7 120 aa4.07□□□□□ -1.76
CPSF7-213ENST00000494016 H7C2G1 150 aa4.07□□□□□ -1.76
CPSF7-213ENST00000494016 OXTP01178 125 aa4.07□□□□□ -1.76
CPSF7-213ENST00000494016 SCGB1C2P0DMR2 95 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms